KIAA0355

General Information

Gene Name       : KIAA0355
Gene ID             : ENSG00000166398.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KIAA0355)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KIAA0355ENSG00000166398.123.073.383.22ENCSR000AEF
HepG2KIAA0355ENSG00000166398.125.585.535.55ENCSR985KAT
K562KIAA0355ENSG00000166398.126.055.035.54ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KIAA0355 is not avaliable on ENCORE database.



Proteins bound to RNA
  • KIAA0355 RNA is bound by 17 proteins.  







eCLIP assay for KIAA0355 is not avaliable on ENCORE database.





17 proteins are bound to KIAA0355 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr193484236334842469+3'-UTR,CDS,intron-Proximal3.413133.94787K562AQR
chr193484591934845983+3'-UTR5.917139.86388K562PUM2
chr193484004834840150+3'-UTR,CDS,intron-Proximal4.484568.30573K562AQR
chr193484004634840161+3'-UTR,CDS,intron-Distal,intron-Proximal4.223463.02181K562PRPF8
chr193484569634845787+3'-UTR3.413856.67761K562UPF1
chr193484629934846376+3'-UTR3.455234.17049K562TARDBP
chr193483078534830908+CDS,intron-Distal,intron-Proximal3.300627.74581HepG2BCLAF1
chr193483894334839010+CDS,intron-Distal,intron-Proximal3.238873.50696K562BUD13
chr193481889434818997+CDS,intron-Distal,intron-Proximal3.970446.08299HepG2PPIG
chr193481873434818771+CDS,intron-Distal3.223453.05161HepG2PPIG
chr193483897734839028+intron-Distal,intron-Proximal3.947754.34418HepG2RBM22
chr193475012134750179+intron-Distal4.196863.29239HepG2CSTF2
chr193477380534773855+intron-Distal4.088733.86809HepG2SUGP2
chr193474580934745965+intron-Distal3.567293.74491K562CSTF2T
chr193474556334745620+intron-Distal,intron-Proximal5.4042711.07880K562CSTF2T
chr193483136934831443+intron-Distal5.232848.13723HepG2PTBP1
chr193474579134745843+intron-Distal4.482215.84605HepG2CSTF2T
chr193475011934750187+intron-Distal5.107425.26571K562FMR1
chr193474556734745642+intron-Distal,intron-Proximal5.324168.73676HepG2GTF2F1
chr193474555834745674+intron-Distal,intron-Proximal4.1638912.95109HepG2FAM120A
chr193474555934745651+intron-Distal,intron-Proximal4.2456812.41022HepG2CSTF2T
chr193477600334776094+intron-Distal,intron-Proximal3.195203.66774HepG2CSTF2
chr193474556834745626+intron-Distal,intron-Proximal5.276346.81276K562GTF2F1
chr193474554234745642+intron-Distal,intron-Proximal5.6451813.74349HepG2PRPF4
chr193483135734831424+intron-Distal4.068335.39628K562PTBP1
chr193474579334745853+intron-Distal4.009153.41584HepG2FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KIAA0355 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KIAA0355 is not available on ENCORE database.

  • 50 RBPs can affect the levels of KIAA0355.  








The Knockdown/knockout RNA-Seq assay for KIAA0355 is not available on ENCORE database.





50 RBPs can affect the gene expression of KIAA0355 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KIAA0355ENSG00000166398.8822.23120696.214600.239901.916601.39350HepG2ACO1
KIAA0355ENSG00000166398.8455.67840584.91740-0.360202.358701.64200HepG2CALR
KIAA0355ENSG00000166398.8515.60280783.94390-0.604508.470107.28190HepG2DAZAP1
KIAA0355ENSG00000166398.8414.69460576.58120-0.475503.213302.48630HepG2DDX21
KIAA0355ENSG00000166398.8327.62780490.89760-0.583403.590202.72410HepG2DDX55
KIAA0355ENSG00000166398.81228.696001011.597800.280402.762802.16230HepG2ETF1
KIAA0355ENSG00000166398.8368.25460534.88560-0.538503.783603.04530HepG2HNRNPA1
KIAA0355ENSG00000166398.8519.45460720.38550-0.471803.245402.24450HepG2HNRNPA2B1
KIAA0355ENSG00000166398.8745.18760602.640100.306202.558701.86780HepG2HNRNPF
KIAA0355ENSG00000166398.8445.85630591.02090-0.406603.559402.87990HepG2HNRNPU
KIAA0355ENSG00000166398.8462.36800603.70960-0.384803.595402.76960HepG2ILF2
KIAA0355ENSG00000166398.8500.31050697.66850-0.479702.759901.57150HepG2KHDRBS1
KIAA0355ENSG00000166398.8493.59320703.12390-0.510505.769404.94400HepG2PCBP1
KIAA0355ENSG00000166398.8342.28940514.52700-0.588003.338501.49420HepG2PHF6
KIAA0355ENSG00000166398.8483.42990646.66260-0.419702.520001.57710HepG2RBM27
KIAA0355ENSG00000166398.8312.22890461.98840-0.565304.092503.35960HepG2RPS19
KIAA0355ENSG00000166398.8455.55560596.38980-0.388602.215701.49570HepG2RPS2
KIAA0355ENSG00000166398.8830.49230642.734400.369602.416901.75560HepG2SF3B1
KIAA0355ENSG00000166398.8492.95250613.80270-0.316302.682402.04590HepG2SMN1
KIAA0355ENSG00000166398.81622.63960954.957100.7647019.8699018.84820HepG2SRFBP1
KIAA0355ENSG00000166398.8426.58260777.49580-0.8660014.2134013.32030HepG2SRSF1
KIAA0355ENSG00000166398.8651.35330829.11430-0.348103.422102.86540HepG2SSB
KIAA0355ENSG00000166398.8654.07520833.16880-0.349204.006003.28210HepG2SUCLG1
KIAA0355ENSG00000166398.8405.95660574.31560-0.500504.139303.55430HepG2TIAL1
KIAA0355ENSG00000166398.8329.71570579.41910-0.8134011.3639010.33650HepG2TRIM56
KIAA0355ENSG00000166398.8500.88510751.76520-0.585804.888104.06630HepG2U2AF1
KIAA0355ENSG00000166398.8284.00720447.36050-0.655503.375102.26170HepG2UPF2
KIAA0355ENSG00000166398.8536.68260807.44400-0.589307.717606.79780HepG2UTP3
KIAA0355ENSG00000166398.8303.84370481.02020-0.662804.680203.74610HepG2XRN2
KIAA0355ENSG00000166398.8416.51110548.46680-0.397003.295102.57300HepG2ZC3H8
KIAA0355ENSG00000166398.81128.054901486.35310-0.397903.489302.75200K562AKAP8L
KIAA0355ENSG00000166398.8873.763501275.33430-0.545605.366603.55800K562APOBEC3C
KIAA0355ENSG00000166398.81291.843301559.55490-0.271702.489401.62670K562ATP5C1
KIAA0355ENSG00000166398.8898.515901163.37220-0.372704.523803.71760K562DDX47
KIAA0355ENSG00000166398.8508.68410744.71850-0.549904.588203.47610K562FIP1L1
KIAA0355ENSG00000166398.8691.086801044.18880-0.595406.414305.25550K562GRSF1
KIAA0355ENSG00000166398.8940.21750614.638100.613206.580505.69960K562HNRNPC
KIAA0355ENSG00000166398.8433.61520612.58820-0.498502.982702.01250K562HNRNPM
KIAA0355ENSG00000166398.8796.846701009.61480-0.341402.245401.52520K562HSPD1
KIAA0355ENSG00000166398.81302.510501577.36870-0.276202.003701.31040K562KIF1C
KIAA0355ENSG00000166398.81337.322101767.05470-0.402004.148302.99830K562MBNL1
KIAA0355ENSG00000166398.8937.425101238.57940-0.401902.196101.43050K562NAA15
KIAA0355ENSG00000166398.8573.16300740.68010-0.369902.833802.16240K562PTBP1
KIAA0355ENSG00000166398.81379.159801677.68390-0.282702.816501.73850K562PUM1
KIAA0355ENSG00000166398.81261.860101643.47830-0.381205.233003.89440K562PUM2
KIAA0355ENSG00000166398.8880.623301474.00680-0.743109.279608.33510K562PUS1
KIAA0355ENSG00000166398.8665.05980502.897400.403102.900801.88530K562RCC2
KIAA0355ENSG00000166398.81331.609701010.518600.398005.864304.56760K562SRPK2
KIAA0355ENSG00000166398.8516.72030726.11230-0.490804.100503.24630K562SRSF1
KIAA0355ENSG00000166398.8532.82660816.35290-0.615506.964705.64660K562SYNCRIP
KIAA0355ENSG00000166398.81108.28070906.955100.289102.099201.33820K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KIAA0355 is not available on ENCORE database.





2 RBPs can affect the splicing of KIAA0355 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSKIAA0355ENSG00000166398.8chr19+3484353134843736348435513484373634842418348424970.206000.003730.02235longerK562AQR
RIKIAA0355ENSG00000166398.8chr19+347905833479137534790583347908283479128534791375-0.456000.000450.00600excludedHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for KIAA0355 is not avaliable on ENCORE database.