INTS7

General Information

Gene Name       : INTS7
Gene ID             : ENSG00000143493.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: INTS7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878INTS7ENSG00000143493.1222.7819.2521.02ENCSR000AEF
HepG2INTS7ENSG00000143493.1210.1714.0812.12ENCSR985KAT
K562INTS7ENSG00000143493.1230.9034.4332.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for INTS7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • INTS7 RNA is bound by 20 proteins.  







eCLIP assay for INTS7 is not avaliable on ENCORE database.





20 proteins are bound to INTS7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1212208814212208868-5'-UTR,intron-Distal,intron-Proximal3.333623.07653K562ZNF622
chr1212125934212126005-CDS,intron-Distal,intron-Proximal4.614125.82129K562PUM2
chr1212190227212190256-CDS,intron-Distal,intron-Proximal4.602544.34038HepG2BCLAF1
chr1212119942212120000-CDS,intron-Distal,intron-Proximal3.045364.06762HepG2U2AF2
chr1212180039212180095-CDS,intron-Distal3.521033.12941K562UCHL5
chr1212115299212115384-CDS,intron-Distal3.940313.08128K562IGF2BP1
chr1212120013212120065-CDS,intron-Distal,intron-Proximal3.645108.77242HepG2U2AF2
chr1212156089212156148-CDS,intron-Distal3.395364.74886HepG2BCLAF1
chr1212149989212150061-CDS,intron-Distal,intron-Proximal4.821144.78556K562LIN28B
chr1212161288212161339-CDS,intron-Distal4.688086.09204K562YBX3
chr1212125921212126027-CDS,intron-Distal,intron-Proximal3.089064.30396K562UCHL5
chr1212180052212180101-CDS,intron-Distal4.349943.16051HepG2PPIG
chr1212141265212141328-CDS,intron-Distal,intron-Proximal3.742864.36528HepG2U2AF2
chr1212141994212142060-CDS,intron-Distal,intron-Proximal5.7258016.49348HepG2U2AF2
chr1212142001212142060-CDS,intron-Distal,intron-Proximal3.556924.07145K562U2AF2
chr1212161239212161346-CDS,intron-Distal,intron-Proximal3.862375.79938K562LIN28B
chr1212120009212120060-CDS,intron-Distal,intron-Proximal3.653243.26999K562U2AF2
chr1212190163212190275-CDS,intron-Distal,intron-Proximal3.715914.95247K562PRPF8
chr1212180044212180098-CDS,intron-Distal4.097846.22576HepG2BCLAF1
chr1212141218212141255-CDS,intron-Distal,intron-Proximal4.013063.01428K562UCHL5
chr1212149922212149981-CDS,intron-Distal,intron-Proximal3.074595.20917HepG2BCLAF1
chr1212118050212118137-CDS,intron-Distal,intron-Proximal4.495624.58968K562PRPF8
chr1212154471212154532-CDS,intron-Distal3.256605.63425HepG2BCLAF1
chr1212208645212208689-CDS,intron-Distal4.577074.13847K562AQR
chr1212148442212148519-CDS,intron-Distal,intron-Proximal4.542984.22101K562PRPF8
chr1212142004212142060-CDS,intron-Distal,intron-Proximal4.547223.31221K562U2AF1
chr1212149919212149997-CDS,intron-Distal,intron-Proximal3.943265.73400HepG2PPIG
chr1212142006212142059-CDS,intron-Distal,intron-Proximal4.956706.74701HepG2U2AF1
chr1212124671212124766-intron-Distal4.377675.66624K562LIN28B
chr1212150237212150296-intron-Distal3.051783.11628K562KHSRP
chr1212152814212152956-intron-Distal4.417684.07352K562KHSRP
chr1212148291212148362-intron-Distal4.085676.32636HepG2U2AF2
chr1212124559212124644-intron-Distal3.058933.51804HepG2HNRNPL
chr1212130180212130250-intron-Distal4.032833.26547HepG2HLTF
chr1212135050212135083-intron-Distal3.903793.01445K562EXOSC5
chr1212137620212137658-intron-Distal3.735284.61337K562EXOSC5
chr1212167374212167485-intron-Distal3.466684.57279K562PTBP1
chr1212136852212136907-intron-Distal5.155047.71312K562EXOSC5
chr1212135545212135585-intron-Distal4.338503.89080K562EXOSC5
chr1212138080212138125-intron-Distal5.229418.36828K562EXOSC5
chr1212136010212136039-intron-Distal4.583024.48623K562EXOSC5
chr1212138486212138531-intron-Distal5.314058.69609K562EXOSC5
chr1212120140212120246-intron-Distal,intron-Proximal3.936226.48117K562KHSRP
chr1212137998212138041-intron-Distal3.564763.43829K562EXOSC5
chr1212136811212136908-intron-Distal3.563243.34056HepG2MATR3
chr1212136352212136391-intron-Distal5.5981911.66401K562EXOSC5
chr1212150296212150379-intron-Distal3.829427.12499K562KHSRP
chr1212130364212130447-intron-Distal3.716733.10466K562SAFB2
chr1212200620212200731-intron-Distal4.270024.78128HepG2SUGP2
chr1212147294212147375-intron-Distal4.284944.14103K562KHSRP
chr1212142122212142187-intron-Distal,intron-Proximal4.674119.87931HepG2U2AF2
chr1212141354212141442-intron-Distal,intron-Proximal4.318505.02888K562KHSRP
chr1212137096212137140-intron-Distal6.2832920.34113K562EXOSC5
chr1212150457212150518-intron-Distal3.778043.49011K562KHSRP
chr1212135442212135504-intron-Distal4.431029.69330K562EXOSC5
chr1212137469212137494-intron-Distal4.500984.80466K562EXOSC5
chr1212137541212137593-intron-Distal6.1997317.99505K562EXOSC5
chr1212135919212135945-intron-Distal5.143538.69609K562EXOSC5
chr1212137428212137464-intron-Distal4.783296.41304K562EXOSC5
chr1212135945212135994-intron-Distal6.0019916.32299K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for INTS7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for INTS7 is not available on ENCORE database.

  • 61 RBPs can affect the levels of INTS7.  








The Knockdown/knockout RNA-Seq assay for INTS7 is not available on ENCORE database.





61 RBPs can affect the gene expression of INTS7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
INTS7ENSG00000143493.8565.33710443.128400.351302.788302.17830HepG2ACO1
INTS7ENSG00000143493.8787.13480542.414000.537103.363502.78500HepG2AKAP1
INTS7ENSG00000143493.8617.29970761.64640-0.303202.414601.76450HepG2AUH
INTS7ENSG00000143493.8397.18800593.69230-0.579904.419103.68360HepG2BOP1
INTS7ENSG00000143493.8374.15910545.04920-0.542703.432202.67430HepG2CPSF6
INTS7ENSG00000143493.8300.93450434.18590-0.528903.955802.73690HepG2YBX3
INTS7ENSG00000143493.8533.98040638.16720-0.257101.976501.33390HepG2DAZAP1
INTS7ENSG00000143493.8306.38790426.35270-0.476703.401102.62680HepG2DNAJC21
INTS7ENSG00000143493.8459.55400629.55820-0.454104.291803.29250HepG2EIF4G1
INTS7ENSG00000143493.8749.67200505.504600.568404.039003.12320HepG2FIP1L1
INTS7ENSG00000143493.8340.62860545.96820-0.680602.224901.32280HepG2FTO
INTS7ENSG00000143493.8391.66000589.64840-0.590304.133903.37970HepG2HNRNPLL
INTS7ENSG00000143493.8400.69010485.82080-0.277901.927501.30120HepG2ILF2
INTS7ENSG00000143493.8409.90310601.32090-0.552902.544201.61860HepG2MTPAP
INTS7ENSG00000143493.8355.55860522.82150-0.556203.486502.64540HepG2NSUN2
INTS7ENSG00000143493.8291.64490424.20710-0.540604.221003.33100HepG2PPIL4
INTS7ENSG00000143493.8340.79290604.05550-0.825808.772807.79070HepG2PUF60
INTS7ENSG00000143493.8755.72320641.219100.236901.890201.38010HepG2PUM1
INTS7ENSG00000143493.8924.59370730.894400.339103.024302.48950HepG2RBM22
INTS7ENSG00000143493.8261.09460423.55560-0.698006.869805.92250HepG2SAFB2
INTS7ENSG00000143493.8391.49790274.712400.511002.912201.94640HepG2SERBP1
INTS7ENSG00000143493.8759.25530573.214300.405401.859201.30380HepG2SF3A3
INTS7ENSG00000143493.8378.21170500.56070-0.404402.876702.27580HepG2SF3B4
INTS7ENSG00000143493.8438.19150579.16940-0.402403.606302.82220HepG2SLBP
INTS7ENSG00000143493.8357.85440649.40550-0.859705.461004.35290HepG2SNRNP70
INTS7ENSG00000143493.8863.66940522.469000.7250010.730709.93190HepG2SRSF1
INTS7ENSG00000143493.8267.51740462.17020-0.788807.557206.80550HepG2TIAL1
INTS7ENSG00000143493.8275.48460466.27320-0.759208.455607.55510HepG2TRIM56
INTS7ENSG00000143493.8908.74020432.523501.0710014.7011013.21360HepG2U2AF1
INTS7ENSG00000143493.8442.34400624.61540-0.497802.314301.55450HepG2UBE2L3
INTS7ENSG00000143493.8700.91240490.794700.514005.452204.65870HepG2UTP3
INTS7ENSG00000143493.81351.144701608.96890-0.252002.581402.02890K562AGGF1
INTS7ENSG00000143493.81266.265301767.85390-0.481405.521904.01860K562AKAP8
INTS7ENSG00000143493.81271.621901674.16580-0.396803.917503.13890K562AKAP8L
INTS7ENSG00000143493.81815.583302250.44440-0.309801.954101.44500K562AQR
INTS7ENSG00000143493.81378.143101756.52870-0.350004.394303.21490K562ATP5C1
INTS7ENSG00000143493.8739.25250986.38490-0.416103.694702.46960K562DDX3X
INTS7ENSG00000143493.82493.869202051.432900.281703.320402.61630K562DDX47
INTS7ENSG00000143493.8863.348501083.45380-0.327603.363802.01710K562EIF2S1
INTS7ENSG00000143493.8949.12950650.903400.544102.634001.65750K562EIF3A
INTS7ENSG00000143493.81441.433501071.704300.427505.768504.94150K562FXR1
INTS7ENSG00000143493.81453.083601771.00990-0.285502.236801.52190K562GPKOW
INTS7ENSG00000143493.81906.850101627.488300.228402.127301.34530K562HNRNPU
INTS7ENSG00000143493.81000.506901290.99810-0.367802.181901.30160K562IGF2BP2
INTS7ENSG00000143493.81323.490501776.84600-0.425005.083303.89900K562KIF1C
INTS7ENSG00000143493.81408.875001884.90680-0.419903.298002.39070K562PCBP3
INTS7ENSG00000143493.81156.934601610.41060-0.477104.103502.15430K562PKM
INTS7ENSG00000143493.81079.549301445.77400-0.421404.644403.60550K562POLR2G
INTS7ENSG00000143493.81983.197602392.74390-0.270801.994001.30110K562PPIG
INTS7ENSG00000143493.81615.017201222.712700.401403.494702.65070K562PRPF8
INTS7ENSG00000143493.8740.71200979.44080-0.403003.470002.44210K562PSIP1
INTS7ENSG00000143493.81751.875001318.269300.410204.622103.78490K562PTBP1
INTS7ENSG00000143493.81374.711101660.59410-0.272601.947601.47700K562PUS1
INTS7ENSG00000143493.81149.197001617.76590-0.493406.406205.53000K562RBM15
INTS7ENSG00000143493.81950.606301288.262800.598405.506803.97940K562SAFB
INTS7ENSG00000143493.82100.134201331.895000.656906.283104.13040K562SDAD1
INTS7ENSG00000143493.8910.64650704.828300.369502.527401.32440K562SLBP
INTS7ENSG00000143493.82190.610001450.168000.595005.014403.90200K562SYNCRIP
INTS7ENSG00000143493.8989.469501238.01870-0.323302.324701.34120K562TRA2A
INTS7ENSG00000143493.81631.988201080.536700.594809.224807.75060K562U2AF2
INTS7ENSG00000143493.81495.076101773.84310-0.246702.584301.88940K562UPF1
INTS7ENSG00000143493.81809.418701578.308800.197002.133901.38320K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for INTS7 is not available on ENCORE database.





5 RBPs can affect the splicing of INTS7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEINTS7ENSG00000143493.8chr1-212119948212120047212118125212118311212125910212126043-0.165000.005160.07590excludedK562SF3B4
SEINTS7ENSG00000143493.8chr1-212149923212150061212141854212142049212151613212151853-0.193000.000710.05540excludedK562SUPV3L1
SEINTS7ENSG00000143493.8chr1-212148507212148714212141854212142049212149923212150000-0.091000.001760.03161excludedK562U2AF2
A3SSINTS7ENSG00000143493.8chr1-2121259102121260872121259102121260432121397712121398400.054000.000830.00589longerK562AQR
A3SSINTS7ENSG00000143493.8chr1-2121199482121200642121199482121200472121259102121260870.110000.000080.00072longerK562AQR
MXEINTS7ENSG00000143493.8chr1-212119948212120047212125910212126043212118125212118311212139771212139840-0.251000.000290.007772includedK562DROSHA
MXEINTS7ENSG00000143493.8chr1-212184716212184763212190227212190365212180591212180791212193463212193610-0.315000.014020.070892includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for INTS7 is not avaliable on ENCORE database.