GLTSCR1L

General Information

Gene Name       : GLTSCR1L
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GLTSCR1L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GLTSCR1L is not avaliable on ENCORE database.



Proteins bound to RNA
  • GLTSCR1L RNA is bound by 32 proteins.  







eCLIP assay for GLTSCR1L is not avaliable on ENCORE database.





32 proteins are bound to GLTSCR1L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr64283495142835002+3'-UTR3.318674.09794HepG2IGF2BP1
chr64283476442834829+3'-UTR4.139943.76686K562IGF2BP1
chr64283477342834823+3'-UTR4.026193.06406HepG2IGF2BP1
chr64283312442833263+3'-UTR,CDS3.8952411.13751K562PUM2
chr64283541242835470+3'-UTR3.784047.24422K562PUM2
chr64279784742797911+CDS,intron-Proximal3.952773.06406HepG2IGF2BP1
chr64279637342796505+CDS3.712918.10122K562RBM15
chr64279751542797619+CDS5.3288310.73550K562RBM15
chr64279733942797414+CDS3.621216.48440K562IGF2BP1
chr64279655242796599+CDS3.864373.05875K562RBM15
chr64279761942797664+CDS4.491255.40333K562RBM15
chr64279755742797629+CDS3.442173.95301K562ZNF622
chr64279710142797155+CDS3.810803.18462K562IGF2BP2
chr64275047342750539+intron-Distal3.353325.46815K562XRN2
chr64275046642750583+intron-Distal3.156855.92676K562EIF4G2
chr64275095642750995+intron-Distal4.0426511.44395K562RBM15
chr64275046842750573+intron-Distal4.478719.09391HepG2PCBP2
chr64275010242750148+intron-Distal4.222367.70912HepG2PRPF4
chr64275040542750446+intron-Distal3.992746.60399K562CSTF2T
chr64275110042751140+intron-Distal4.337123.53896K562NONO
chr64275094942750958+intron-Distal4.6547226.92500HepG2CSTF2T
chr64280944342809523+intron-Distal5.443239.38442HepG2QKI
chr64275084442750903+intron-Distal4.499426.05963HepG2XRN2
chr64275983242759922+intron-Distal4.366934.66266K562TARDBP
chr64275010442750160+intron-Distal4.5383911.12103K562FASTKD2
chr64280943142809527+intron-Distal5.539276.23225K562QKI
chr64275096442751012+intron-Distal4.2167511.15942HepG2RBM15
chr64275051642750545+intron-Distal3.403433.41847HepG2GTF2F1
chr64275121842751305+intron-Distal4.5273210.81740HepG2PRPF4
chr64275863942758687+intron-Distal4.159503.80512K562CSTF2T
chr64275009742750160+intron-Distal4.740899.51301K562GTF2F1
chr64275046842750520+intron-Distal3.3239215.99495HepG2CSTF2T
chr64275015442750199+intron-Distal4.015095.28409HepG2GTF2F1
chr64275045842750515+intron-Distal3.344954.49407K562PHF6
chr64275093442750945+intron-Distal4.680956.84460HepG2CSTF2T
chr64275123142751289+intron-Distal3.3228812.15667HepG2CSTF2T
chr64275869842758781+intron-Distal3.029503.13903HepG2CSTF2
chr64275045542750512+intron-Distal4.424548.91844K562GTF2F1
chr64275094342751006+intron-Distal3.054903.29754HepG2SFPQ
chr64275109742751122+intron-Distal3.134837.16128HepG2CSTF2T
chr64275046242750514+intron-Distal3.765408.59527K562NONO
chr64275092342751004+intron-Distal3.584678.06159K562XRN2
chr64275130442751400+intron-Distal4.9105413.16564K562NONO
chr64275063342750674+intron-Distal4.992747.47837K562CSTF2T
chr64275016142750197+intron-Distal4.189403.76710K562NONO
chr64275075342750839+intron-Distal3.9207412.70454K562GTF2F1
chr64275095142750956+intron-Distal4.7547810.40953K562RBM15
chr64275052042750548+intron-Distal4.4525222.55696HepG2CSTF2T
chr64275131042751366+intron-Distal3.9621115.22139HepG2CSTF2T
chr64275095042750996+intron-Distal3.658193.19512HepG2FKBP4
chr64275045342750507+intron-Distal3.9110810.80964HepG2PRPF4
chr64275092742751006+intron-Distal3.881163.60521K562FUS
chr64275012642750189+intron-Distal3.006613.41096HepG2DROSHA
chr64275124442751304+intron-Distal5.3489510.27176K562NONO
chr64275117042751295+intron-Distal4.188627.64608HepG2DGCR8
chr64275054642750577+intron-Distal4.001897.57827K562NONO
chr64275016042750195+intron-Distal5.160357.63549K562GTF2F1
chr64275010442750154+intron-Distal5.3131510.45119HepG2GTF2F1
chr64275009842750185+intron-Distal5.4724810.24238HepG2PCBP2
chr64275075342750818+intron-Distal5.4981211.36630HepG2GTF2F1
chr64275077142750837+intron-Distal3.370256.92547K562XRN2
chr64275014842750191+intron-Distal5.046918.56484HepG2PRPF4
chr64275073542750754+intron-Distal3.585148.16050K562CSTF2T
chr64280614442806223+intron-Distal4.648798.40379HepG2XPO5
chr64275087442750923+intron-Distal3.542854.06931K562XRN2
chr64275091842750925+intron-Distal4.913937.44133HepG2CSTF2T
chr64275083842750877+intron-Distal3.551679.09947HepG2CSTF2T
chr64275052542750575+intron-Distal3.489094.52495HepG2XRN2
chr64275110942751132+intron-Distal4.438395.28165K562CSTF2T
chr64275075142750825+intron-Distal4.195255.82242K562EWSR1
chr64275010942750180+intron-Distal4.509263.02711K562EWSR1
chr64275011942750197+intron-Distal3.396478.42311K562DROSHA
chr64275074542750874+intron-Distal4.100844.91593K562FAM120A
chr64275077342750851+intron-Distal4.343938.22731HepG2NCBP2
chr64275128942751310+intron-Distal4.7162912.31091HepG2CSTF2T
chr64275042342750546+intron-Distal4.988499.95814K562FUS
chr64275016442750198+intron-Distal3.761579.16267K562CSTF2T
chr64275075442750852+intron-Distal4.2904821.11035K562CSTF2T
chr64275130542751379+intron-Distal3.184146.17487K562CSTF2T
chr64275095042750964+intron-Distal3.978219.09685HepG2RBM15
chr64275095042751014+intron-Distal5.5054911.02023K562NONO
chr64275012542750180+intron-Distal4.728134.14689K562FTO
chr64275046842750549+intron-Distal3.136943.95211HepG2STAU2
chr64275076142750818+intron-Distal4.479398.45394K562DDX52
chr64275094542751005+intron-Distal3.164937.50569HepG2PRPF4
chr64275063642750674+intron-Distal4.646585.59071K562NONO
chr64275011442750207+intron-Distal4.536905.58865HepG2NCBP2
chr64275039042750448+intron-Distal5.819339.13283K562GTF2F1
chr64275110142751149+intron-Distal3.477654.22460K562RBM15
chr64275076042750852+intron-Distal3.5219122.22938K562TIA1
chr64275076342750830+intron-Distal3.476138.84349K562GEMIN5
chr64275010542750151+intron-Distal4.688869.71261HepG2FAM120A
chr64275116842751218+intron-Distal3.003099.07474HepG2NKRF
chr64275039142750437+intron-Distal4.700255.82840HepG2GTF2F1
chr64275116742751229+intron-Distal3.1835811.58742HepG2FAM120A
chr64275074642750829+intron-Distal4.255515.71236K562FUS
chr64275112242751140+intron-Distal3.378998.29080HepG2CSTF2T
chr64275125542751305+intron-Distal3.668307.63581K562CSTF2T
chr64275116742751232+intron-Distal3.056647.94044K562TIA1
chr64275045842750541+intron-Distal3.367336.87273K562DDX52
chr64275109942751139+intron-Distal4.366604.97583HepG2GTF2F1
chr64275868742758737+intron-Distal4.054053.96304K562CSTF2T
chr64275054842750586+intron-Distal5.3308821.36056HepG2CSTF2T
chr64275045142750556+intron-Distal3.4859214.93889K562CSTF2T
chr64275077842750838+intron-Distal3.1669514.10603HepG2CSTF2T
chr64274991942749985+intron-Distal,intron-Proximal3.814953.88679HepG2CSTF2
chr64275052442750589+intron-Distal4.798475.55667K562EWSR1
chr64275076242750829+intron-Distal5.7237013.46310K562NONO
chr64275073942750847+intron-Distal3.3536415.94029HepG2FAM120A
chr64275094742750971+intron-Distal3.742549.69250K562CSTF2T
chr64275074542750821+intron-Distal3.6844914.05710HepG2PRPF4
chr64275125842751276+intron-Distal4.467645.23751K562TIA1
chr64275117642751230+intron-Distal3.426255.87309HepG2XRN2
chr64275124342751269+intron-Distal3.481516.87013HepG2FAM120A
chr64275095842751020+intron-Distal4.1817438.41667HepG2CSTF2T
chr64275045342750564+intron-Distal3.278995.37331HepG2FASTKD2
chr64275046842750586+intron-Distal3.6116218.90476HepG2FAM120A
chr64275045142750559+intron-Distal4.152133.49944K562FTO
chr64274993042749988+intron-Distal,intron-Proximal4.0150610.53086HepG2CSTF2T
chr64275906942759161+intron-Distal4.0699110.37026K562CSTF2T
chr64275116242751231+intron-Distal3.7681922.38294HepG2CSTF2T
chr64275045442750513+intron-Distal4.388613.27582HepG2SFPQ
chr64275117342751218+intron-Distal3.128843.57593K562GTF2F1
chr64275055642750593+intron-Distal3.7118010.98507K562CSTF2T
chr64275010242750164+intron-Distal4.5540516.86200K562CSTF2T
chr64275116942751225+intron-Distal4.8028113.16532K562NONO
chr64275906842759173+intron-Distal6.3351022.64867HepG2CSTF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GLTSCR1L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GLTSCR1L is not available on ENCORE database.

  • 60 RBPs can affect the levels of GLTSCR1L.  








The Knockdown/knockout RNA-Seq assay for GLTSCR1L is not available on ENCORE database.





60 RBPs can affect the gene expression of GLTSCR1L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GLTSCR1LENSG00000112624.8649.81080859.39530-0.403302.187701.70870HepG2AKAP1
GLTSCR1LENSG00000112624.8848.114101011.48470-0.254102.221401.59430HepG2AUH
GLTSCR1LENSG00000112624.8565.41030760.02640-0.426804.141703.38520HepG2CELF1
GLTSCR1LENSG00000112624.8646.93360817.21890-0.337103.429402.61980HepG2DAZAP1
GLTSCR1LENSG00000112624.8398.28880651.10710-0.709106.942705.91840HepG2DDX21
GLTSCR1LENSG00000112624.8495.25480663.11450-0.421103.142902.45520HepG2DNAJC2
GLTSCR1LENSG00000112624.81112.25640731.485700.604503.971903.15450HepG2EIF4B
GLTSCR1LENSG00000112624.8523.26840654.81280-0.323502.047101.33070HepG2EWSR1
GLTSCR1LENSG00000112624.8607.417701010.71710-0.734606.506805.37590HepG2FIP1L1
GLTSCR1LENSG00000112624.8659.58670495.049800.413902.726001.94560HepG2FUBP3
GLTSCR1LENSG00000112624.8443.68300675.32280-0.606005.194004.34710HepG2HNRNPA1
GLTSCR1LENSG00000112624.8548.08350712.10190-0.377702.272901.63620HepG2HNRNPK
GLTSCR1LENSG00000112624.8608.97980744.42500-0.289702.607901.95360HepG2HNRNPL
GLTSCR1LENSG00000112624.8946.06970751.522400.332002.033501.48500HepG2HNRNPLL
GLTSCR1LENSG00000112624.8526.44220697.29240-0.405503.061902.06310HepG2HNRNPM
GLTSCR1LENSG00000112624.8850.402001266.44720-0.574604.230803.19780HepG2LARP4
GLTSCR1LENSG00000112624.8484.55350762.54210-0.654204.873004.05450HepG2MATR3
GLTSCR1LENSG00000112624.8596.48420817.91470-0.455503.842002.89310HepG2MSI2
GLTSCR1LENSG00000112624.8264.85870394.95550-0.576502.830902.01220HepG2PRPF8
GLTSCR1LENSG00000112624.8592.46500773.55110-0.384802.142501.60880HepG2PUF60
GLTSCR1LENSG00000112624.8950.42910756.602800.328902.735302.11360HepG2QKI
GLTSCR1LENSG00000112624.81267.22070994.950100.348903.531402.57290HepG2RBM15
GLTSCR1LENSG00000112624.8681.19560970.66010-0.510906.079205.38460HepG2RBM22
GLTSCR1LENSG00000112624.8486.40330669.28320-0.460503.000102.16760HepG2RPS2
GLTSCR1LENSG00000112624.8408.55930567.42840-0.473902.779101.83780HepG2SERBP1
GLTSCR1LENSG00000112624.8929.08860743.877900.320702.021801.41360HepG2SF3B1
GLTSCR1LENSG00000112624.8571.21540774.92710-0.440003.620102.90040HepG2SMN1
GLTSCR1LENSG00000112624.81141.61780827.687700.463802.420201.69120HepG2SNRNP70
GLTSCR1LENSG00000112624.8750.243901096.31800-0.547208.773108.01850HepG2SRFBP1
GLTSCR1LENSG00000112624.8523.63180759.20340-0.535905.959605.33100HepG2SRSF1
GLTSCR1LENSG00000112624.8889.65190617.667400.526307.423506.59860HepG2SRSF9
GLTSCR1LENSG00000112624.8760.09860951.85160-0.324603.287802.74010HepG2SSB
GLTSCR1LENSG00000112624.8922.19810682.449900.434304.538903.84810HepG2TAF15
GLTSCR1LENSG00000112624.8463.57750724.97560-0.645105.282604.63740HepG2TIAL1
GLTSCR1LENSG00000112624.8200.97330301.04160-0.583002.822302.05490HepG2UCHL5
GLTSCR1LENSG00000112624.8635.37570822.63550-0.372603.624302.95450HepG2UTP3
GLTSCR1LENSG00000112624.8315.18130501.62100-0.670404.053203.18330HepG2XRN2
GLTSCR1LENSG00000112624.8650.19230809.46940-0.316103.008702.31400HepG2ZC3H8
GLTSCR1LENSG00000112624.8796.89560937.10860-0.233802.165001.66410HepG2ZNF622
GLTSCR1LENSG00000112624.8701.693101068.22580-0.606308.268807.36000K562AGGF1
GLTSCR1LENSG00000112624.8928.649301173.70930-0.337902.719701.74780K562AKAP8
GLTSCR1LENSG00000112624.8762.953101111.51050-0.542905.767104.80340K562AKAP8L
GLTSCR1LENSG00000112624.8631.22720827.55800-0.390702.441101.88360K562AQR
GLTSCR1LENSG00000112624.8866.451001166.19120-0.428602.640401.74850K562ATP5C1
GLTSCR1LENSG00000112624.8950.504701196.23370-0.331703.686202.65490K562DKC1
GLTSCR1LENSG00000112624.8333.61320527.94810-0.662204.867703.64130K562EFTUD2
GLTSCR1LENSG00000112624.8574.78910920.09220-0.678707.353105.91050K562FIP1L1
GLTSCR1LENSG00000112624.8693.59610933.44880-0.428502.392201.68720K562GRSF1
GLTSCR1LENSG00000112624.8480.01700756.78240-0.656805.199003.87570K562HNRNPM
GLTSCR1LENSG00000112624.81019.337901247.45900-0.291402.016101.33170K562HSPD1
GLTSCR1LENSG00000112624.8870.537501179.68480-0.438404.192403.15080K562KIF1C
GLTSCR1LENSG00000112624.8934.59360677.030000.465002.706701.78630K562KRR1
GLTSCR1LENSG00000112624.8531.71090688.95580-0.373802.571501.76040K562MAGOH
GLTSCR1LENSG00000112624.8909.724901129.17210-0.311802.284801.33770K562MAK16
GLTSCR1LENSG00000112624.8422.30490613.03520-0.537704.022702.83770K562PCBP2
GLTSCR1LENSG00000112624.8437.94890626.95960-0.517604.303803.30050K562POLR2G
GLTSCR1LENSG00000112624.8665.528701044.47710-0.650207.025805.60630K562PPIG
GLTSCR1LENSG00000112624.8282.58580513.75370-0.862407.218606.01020K562PRPF8
GLTSCR1LENSG00000112624.8397.13000525.60320-0.404402.423101.58190K562PSIP1
GLTSCR1LENSG00000112624.8416.28680669.34930-0.685207.560306.49810K562PTBP1
GLTSCR1LENSG00000112624.8787.646101102.50600-0.485204.325803.66960K562PUS1
GLTSCR1LENSG00000112624.8861.458301074.06640-0.318202.421101.86000K562RBM15
GLTSCR1LENSG00000112624.8465.27880641.93130-0.464303.408802.47090K562RBM22
GLTSCR1LENSG00000112624.8385.79640523.33170-0.439902.160201.44310K562RPS19
GLTSCR1LENSG00000112624.8363.70260579.96240-0.673207.004005.60540K562SF3B4
GLTSCR1LENSG00000112624.8473.57000656.16390-0.470503.686302.87550K562SRSF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GLTSCR1L is not available on ENCORE database.





3 RBPs can affect the splicing of GLTSCR1L :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGLTSCR1LENSG00000112624.8chr6+4277804342778139427497644274983942789755427898010.393000.000500.08631includedK562FTO
SEGLTSCR1LENSG00000112624.8chr6+428213754282147642819829428199354282359342823655-0.177000.003360.07795excludedK562AKAP8L
SEGLTSCR1LENSG00000112624.8chr6+427780434277813942749764427498394278975542789801-0.262000.001960.02955excludedK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GLTSCR1L is not avaliable on ENCORE database.