DIMT1

General Information

Gene Name       : DIMT1
Gene ID             : ENSG00000086189.9
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: DIMT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DIMT1ENSG00000086189.920.2619.5819.92ENCSR000AEF
HepG2DIMT1ENSG00000086189.914.1422.4918.31ENCSR985KAT
K562DIMT1ENSG00000086189.939.6739.7539.71ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DIMT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DIMT1 RNA is bound by 10 proteins.  







eCLIP assay for DIMT1 is not avaliable on ENCORE database.





10 proteins are bound to DIMT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr56168974661689810-3'-UTR,CDS,intron-Distal,intron-Proximal5.196475.68502HepG2PRPF8
chr56169036561690370-3'-UTR,CDS,intron-Distal7.2222648.13137K562YBX3
chr56169031061690332-3'-UTR,CDS,intron-Distal,intron-Proximal6.6311517.48226K562YBX3
chr56169037661690419-3'-UTR,CDS,intron-Distal3.850336.64581K562YBX3
chr56168455261684645-3'-UTR,intron-Distal,intron-Proximal3.385347.42053K562IGF2BP1
chr56168425361684338-3'-UTR,intron-Distal3.972133.77503K562TIA1
chr56168447161684551-3'-UTR,intron-Distal3.842558.33024K562PUM2
chr56168470461684787-3'-UTR,intron-Distal,intron-Proximal4.159715.75821HepG2SUB1
chr56169035661690365-3'-UTR,CDS,intron-Distal7.2411948.57059K562YBX3
chr56169033361690356-3'-UTR,CDS,intron-Distal7.5806264.14109K562YBX3
chr56169036961690435-3'-UTR,CDS,intron-Distal,intron-Proximal3.660114.21358HepG2U2AF2
chr56168437661684448-3'-UTR,intron-Distal4.192484.20872K562IGF2BP1
chr56169951661699680-5'-UTR,CDS,intron-Distal3.9672224.45771K562DDX3X
chr56169430061694369-5'-UTR,CDS,intron-Distal,intron-Proximal5.230264.68690HepG2PRPF8
chr56169793761697949-CDS,intron-Distal3.214433.87559K562YBX3
chr56168671961686810-CDS,intron-Distal,intron-Proximal3.472894.41952K562IGF2BP1
chr56169945161699543-CDS,intron-Distal3.620948.47339HepG2PRPF8
chr56169949161699595-CDS,intron-Distal3.791273.21539HepG2SRSF1
chr56169888661699078-intron-Distal,intron-Proximal3.661625.14864K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DIMT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DIMT1 is not available on ENCORE database.

  • 77 RBPs can affect the levels of DIMT1.  








The Knockdown/knockout RNA-Seq assay for DIMT1 is not available on ENCORE database.





77 RBPs can affect the gene expression of DIMT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DIMT1ENSG00000086189.5160.40530241.84770-0.592402.739801.74610HepG2ADAR
DIMT1ENSG00000086189.5395.78110568.94890-0.523604.886904.01650HepG2AUH
DIMT1ENSG00000086189.5180.80560277.15810-0.616302.786701.88560HepG2BCLAF1
DIMT1ENSG00000086189.5340.25860625.59380-0.878604.975004.07600HepG2CPSF6
DIMT1ENSG00000086189.5299.18180405.49160-0.438602.826202.17780HepG2CELF1
DIMT1ENSG00000086189.5352.97110260.279700.439403.075202.19860HepG2DDX19B
DIMT1ENSG00000086189.5282.86150394.30510-0.479202.582201.59940HepG2DDX5
DIMT1ENSG00000086189.5228.01060349.92520-0.617903.037102.39260HepG2DDX6
DIMT1ENSG00000086189.5158.69640243.52480-0.617803.423002.64640HepG2DNAJC21
DIMT1ENSG00000086189.5141.13430336.45240-1.253309.889608.81030HepG2EIF2S1
DIMT1ENSG00000086189.5268.45050412.04920-0.618204.011603.04410HepG2EIF4G2
DIMT1ENSG00000086189.5431.54760653.25390-0.598106.599905.73730HepG2ETF1
DIMT1ENSG00000086189.5379.85650626.61810-0.722102.511901.54610HepG2FTO
DIMT1ENSG00000086189.5205.39710347.99870-0.760704.606803.75720HepG2G3BP1
DIMT1ENSG00000086189.5342.34090709.22240-1.050807.796506.75690HepG2GPKOW
DIMT1ENSG00000086189.5306.34680472.95480-0.626505.803104.81380HepG2HNRNPF
DIMT1ENSG00000086189.5256.34150397.16110-0.631705.611704.68100HepG2HNRNPL
DIMT1ENSG00000086189.5328.23890676.81830-1.044007.926906.92270HepG2HNRNPLL
DIMT1ENSG00000086189.5264.31750465.72790-0.817207.941906.77290HepG2IGF2BP1
DIMT1ENSG00000086189.5436.95980690.12870-0.659402.281001.40690HepG2MTPAP
DIMT1ENSG00000086189.5248.57850432.33640-0.798507.593206.34800HepG2NOL12
DIMT1ENSG00000086189.5436.97530600.08300-0.457602.466201.75950HepG2NSUN2
DIMT1ENSG00000086189.5307.19130412.70390-0.426002.341501.78670HepG2PUF60
DIMT1ENSG00000086189.5292.78210381.91680-0.383402.053201.50370HepG2QKI
DIMT1ENSG00000086189.5381.06980250.068000.607602.352601.69940HepG2RAVER1
DIMT1ENSG00000086189.5678.04620545.994300.312402.161901.68890HepG2RBM22
DIMT1ENSG00000086189.5362.76110509.45150-0.489903.100602.38430HepG2RPLP0
DIMT1ENSG00000086189.5257.52710367.14070-0.511603.332602.69100HepG2SF3B4
DIMT1ENSG00000086189.5314.28730395.72100-0.332401.950101.34240HepG2SLBP
DIMT1ENSG00000086189.5534.74080383.209200.480603.911903.37360HepG2SRSF1
DIMT1ENSG00000086189.5506.96860720.76800-0.507602.854201.83570HepG2SRSF3
DIMT1ENSG00000086189.5308.13290464.65400-0.592605.164204.26080HepG2SRSF7
DIMT1ENSG00000086189.5225.50860311.75580-0.467202.907302.34470HepG2SRSF9
DIMT1ENSG00000086189.5369.79100535.40110-0.533904.050103.45480HepG2SSB
DIMT1ENSG00000086189.5184.98880312.21190-0.755103.921003.13720HepG2SUPV3L1
DIMT1ENSG00000086189.5304.60710659.52090-1.114506.444405.39980HepG2TARDBP
DIMT1ENSG00000086189.5178.92130263.96310-0.561003.041102.52090HepG2TIAL1
DIMT1ENSG00000086189.5470.69410359.647000.388102.080201.52760HepG2U2AF1
DIMT1ENSG00000086189.5520.58030312.853500.734507.963907.03180HepG2UTP3
DIMT1ENSG00000086189.5424.03690275.018900.624603.224502.07700HepG2XRCC6
DIMT1ENSG00000086189.5250.91480322.67660-0.362901.934701.35760HepG2ZC3H8
DIMT1ENSG00000086189.51175.51670783.566800.585104.637503.06750K562AARS
DIMT1ENSG00000086189.5442.96130578.43630-0.385003.035201.45460K562AKAP1
DIMT1ENSG00000086189.5954.601301252.36470-0.391703.346802.62720K562AKAP8L
DIMT1ENSG00000086189.52232.763401636.541000.448105.489803.66310K562APOBEC3C
DIMT1ENSG00000086189.5996.352701752.06530-0.814305.042304.29270K562AQR
DIMT1ENSG00000086189.5987.403001681.70010-0.768208.333806.96000K562CPSF6
DIMT1ENSG00000086189.53028.048601800.280600.7501023.8832022.15630K562DDX47
DIMT1ENSG00000086189.5490.30830735.59390-0.585204.715503.50800K562EFTUD2
DIMT1ENSG00000086189.5877.886001416.11560-0.689804.107603.25700K562EIF2S2
DIMT1ENSG00000086189.5816.99240460.912000.825705.090403.68730K562EIF3A
DIMT1ENSG00000086189.5998.59990702.760100.506803.948103.00520K562EIF3G
DIMT1ENSG00000086189.5999.20850744.171600.425102.994801.81330K562FKBP4
DIMT1ENSG00000086189.51198.691301710.97180-0.513405.195904.01840K562FMR1
DIMT1ENSG00000086189.51177.61630636.847000.8868015.7281014.39420K562FXR1
DIMT1ENSG00000086189.5965.74030622.719000.633004.594103.63120K562G3BP2
DIMT1ENSG00000086189.5880.224601605.65850-0.867209.412107.93970K562GPKOW
DIMT1ENSG00000086189.5582.03810857.65870-0.559305.275204.47590K562HNRNPC
DIMT1ENSG00000086189.5592.37290765.76720-0.370402.500001.42550K562HNRNPF
DIMT1ENSG00000086189.51031.470901329.11070-0.365803.061902.19100K562KIF1C
DIMT1ENSG00000086189.51226.837301488.93430-0.279302.091501.31670K562MBNL1
DIMT1ENSG00000086189.5909.28310715.814100.345002.298701.61260K562PRPF8
DIMT1ENSG00000086189.5526.89550768.94660-0.545404.411803.22960K562PSIP1
DIMT1ENSG00000086189.51146.66750831.834400.463003.933903.15540K562PTBP1
DIMT1ENSG00000086189.52549.383302151.886000.244402.683001.63410K562PUM1
DIMT1ENSG00000086189.5914.488901242.08120-0.441703.649003.03740K562PUS1
DIMT1ENSG00000086189.5890.997401210.15550-0.441705.105904.32310K562RBM15
DIMT1ENSG00000086189.51005.11820729.234800.462803.245602.36020K562RPS19
DIMT1ENSG00000086189.51123.97210706.030200.670708.319606.49300K562SAFB
DIMT1ENSG00000086189.51027.70000729.927400.493504.281102.44550K562SDAD1
DIMT1ENSG00000086189.5982.870801279.36610-0.380404.617003.58610K562SF3A3
DIMT1ENSG00000086189.51201.145601526.86050-0.346202.223901.36170K562SF3B1
DIMT1ENSG00000086189.51161.39830815.410400.510204.393003.50660K562SRSF1
DIMT1ENSG00000086189.51398.20130794.738500.8149014.7904012.89460K562SYNCRIP
DIMT1ENSG00000086189.5564.78690825.38780-0.547402.835602.12000K562TARDBP
DIMT1ENSG00000086189.5564.32440739.61800-0.390302.253201.41500K562TIAL1
DIMT1ENSG00000086189.5567.56460785.56450-0.468903.464002.38460K562TRIM56
DIMT1ENSG00000086189.51372.658201971.68370-0.522502.667901.31980K562TRIP6
DIMT1ENSG00000086189.5854.11360623.563100.453804.369503.36430K562U2AF2
DIMT1ENSG00000086189.5554.76330733.61890-0.403202.362601.43000K562UCHL5
DIMT1ENSG00000086189.5967.216901374.84030-0.507408.873107.67510K562UPF1
DIMT1ENSG00000086189.5874.541701176.41410-0.427804.195403.10960K562WDR3
DIMT1ENSG00000086189.51440.251301223.288300.235502.520001.70990K562WDR43
DIMT1ENSG00000086189.51103.09360704.204000.647403.114401.41830K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DIMT1 is not available on ENCORE database.





5 RBPs can affect the splicing of DIMT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDIMT1ENSG00000086189.5chr5-616879976168806161686702616868096168875261688817-0.065000.000500.01153excludedHepG2U2AF1
SEDIMT1ENSG00000086189.5chr5-616879976168806161686702616868096168875261688817-0.084000.000000.00000excludedHepG2U2AF2
SEDIMT1ENSG00000086189.5chr5-616978626169794961694646616947086169909961699173-0.226000.010540.09513excludedHepG2U2AF2
SEDIMT1ENSG00000086189.5chr5-616943376169438761690310616904346169447261694566-0.069000.000000.00000excludedK562AQR
SEDIMT1ENSG00000086189.5chr5-616887526168881761686702616868096168978161689874-0.077000.000010.00017excludedK562AQR
SEDIMT1ENSG00000086189.5chr5-616887526168881761686702616868096168978161689874-0.052000.005550.06736excludedK562PUS1
SEDIMT1ENSG00000086189.5chr5-616879976168806161686702616868096168875261688817-0.064000.000020.00080excludedK562U2AF1
SEDIMT1ENSG00000086189.5chr5-616879976168808561686702616868096168875261688817-0.070000.000880.01796excludedK562U2AF2
SEDIMT1ENSG00000086189.5chr5-616879976168806161686702616868096168875261688817-0.090000.000010.00084excludedK562TARDBP
A3SSDIMT1ENSG00000086189.5chr5-6168473661684916616847366168487961686702616868680.076000.000000.00000longerK562AQR
MXEDIMT1ENSG00000086189.5chr5-6168875261688817616897816168987461686702616868096169031061690434-0.246000.000000.000002includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DIMT1 is not avaliable on ENCORE database.