DGKD

General Information

Gene Name       : DGKD
Gene ID             : ENSG00000077044.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DGKD)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DGKDENSG00000077044.1011.7119.3915.55ENCSR000AEF
HepG2DGKDENSG00000077044.1039.7326.1832.95ENCSR985KAT
K562DGKDENSG00000077044.1011.129.3110.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DGKD is not avaliable on ENCORE database.



Proteins bound to RNA
  • DGKD RNA is bound by 33 proteins.  







eCLIP assay for DGKD is not avaliable on ENCORE database.





33 proteins are bound to DGKD RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2234379980234380098+3'-UTR3.608585.37958HepG2LSM11
chr2234368973234368990+3'-UTR,CDS3.975274.56106HepG2EIF3H
chr2234371312234371379+3'-UTR,CDS3.435914.27313HepG2PABPN1
chr2234379397234379450+3'-UTR4.339529.92415HepG2EIF3H
chr2234366870234366935+3'-UTR,CDS,intron-Proximal3.166683.50696K562BUD13
chr2234368460234368482+3'-UTR,CDS4.701534.56577HepG2EIF3H
chr2234365968234366037+3'-UTR,CDS,intron-Proximal3.022748.85328HepG2PRPF8
chr2234378706234378764+3'-UTR4.288548.51579HepG2EIF3H
chr2234378484234378544+3'-UTR4.171253.55983HepG2HLTF
chr2234371377234371427+3'-UTR,CDS,intron-Proximal3.391229.05128HepG2PRPF8
chr2234366875234366952+3'-UTR,CDS,intron-Proximal4.7680324.23298HepG2SF3A3
chr2234378993234379055+3'-UTR4.8309915.67921HepG2EIF3H
chr2234365879234365886+3'-UTR,CDS3.543453.59112HepG2PPIG
chr2234365632234365640+3'-UTR,CDS3.075723.73413HepG2PPIG
chr2234368397234368489+3'-UTR,CDS,intron-Proximal3.4207114.12454HepG2BUD13
chr2234368918234368979+3'-UTR,CDS3.727949.30518HepG2PPIG
chr2234377066234377106+3'-UTR,CDS,intron-Proximal3.260013.07152HepG2HLTF
chr2234368979234368991+3'-UTR,CDS4.824266.46301HepG2PPIG
chr2234365638234365650+3'-UTR,CDS,intron-Proximal4.1473811.57027HepG2PRPF8
chr2234372831234372907+3'-UTR,CDS3.281634.96088HepG2GRWD1
chr2234368968234369039+3'-UTR,CDS,intron-Proximal3.6477711.41099HepG2PRPF8
chr2234380492234380540+3'-UTR4.080473.35113HepG2ZC3H11A
chr2234365921234365958+3'-UTR,CDS3.455853.63043HepG2GRWD1
chr2234366991234367042+3'-UTR,CDS3.073224.63108HepG2PPIG
chr2234380002234380065+3'-UTR3.425514.88240HepG2EIF3H
chr2234377178234377243+3'-UTR,CDS,intron-Proximal4.238808.78209HepG2PRPF8
chr2234368402234368486+3'-UTR,CDS,intron-Proximal3.021678.09190HepG2PPIG
chr2234379489234379515+3'-UTR4.320616.42098HepG2EIF3H
chr2234379189234379212+3'-UTR4.547476.33531HepG2EIF3H
chr2234377068234377107+3'-UTR,CDS,intron-Proximal3.927315.76420HepG2EIF3H
chr2234380000234380065+3'-UTR4.025383.28046HepG2ZC3H11A
chr2234366879234366937+3'-UTR,CDS,intron-Proximal5.2397218.80977K562SF3B4
chr2234371324234371395+3'-UTR,CDS,intron-Proximal3.232049.89337HepG2PPIG
chr2234379163234379189+3'-UTR4.487825.50789HepG2EIF3H
chr2234378485234378528+3'-UTR3.518266.63056HepG2EIF3H
chr2234370995234371036+3'-UTR,CDS5.357469.44903HepG2PPIG
chr2234380097234380146+3'-UTR3.673247.81229HepG2EIF3H
chr2234366889234366950+3'-UTR,CDS,intron-Proximal3.7849412.84406HepG2SF3B4
chr2234380633234380706+3'-UTR3.372636.09716HepG2ZC3H11A
chr2234379228234379273+3'-UTR4.673249.29055HepG2EIF3H
chr2234380631234380719+3'-UTR6.9497129.84239K562PUM2
chr2234379597234379616+3'-UTR3.558835.66290HepG2EIF3H
chr2234370993234371040+3'-UTR,CDS,intron-Proximal4.409056.42098HepG2EIF3H
chr2234367026234367084+3'-UTR,CDS,intron-Proximal4.516818.77485HepG2PRPF8
chr2234380491234380551+3'-UTR4.8661810.57717HepG2EIF3H
chr2234378490234378554+3'-UTR3.259973.97153HepG2UPF1
chr2234344963234345027+CDS3.970528.00190HepG2GRWD1
chr2234344987234345029+CDS4.9731014.24028HepG2PPIG
chr2234296957234297013+CDS,intron-Distal3.531207.02567HepG2BCLAF1
chr2234343076234343125+CDS3.182613.34034HepG2HLTF
chr2234356737234356792+CDS3.002166.42750HepG2GRWD1
chr2234299053234299119+CDS,intron-Distal3.510498.07380HepG2GRWD1
chr2234296958234297010+CDS,intron-Distal3.277714.87174HepG2PPIG
chr2234344960234345068+CDS,intron-Proximal4.258633.36385K562UCHL5
chr2234345040234345063+CDS4.647445.52963HepG2PPIG
chr2234345066234345180+CDS,intron-Proximal4.251356.08301HepG2EFTUD2
chr2234358631234358708+CDS3.5428011.11819HepG2PPIG
chr2234344961234345048+CDS,intron-Proximal3.988395.08507K562ZNF622
chr2234344961234344987+CDS,intron-Proximal4.8050613.19925HepG2PPIG
chr2234354367234354413+CDS,intron-Proximal4.022138.98325HepG2PPIG
chr2234299109234299167+CDS,intron-Distal,intron-Proximal4.766376.65114HepG2PRPF8
chr2234350566234350641+CDS4.1360812.68282HepG2PPIG
chr2234356925234357014+CDS3.9058816.41719HepG2PPIG
chr2234356920234356993+CDS,intron-Proximal4.069084.12464HepG2UCHL5
chr2234343400234343451+CDS,intron-Proximal3.089153.80334HepG2U2AF2
chr2234354266234354316+CDS,intron-Proximal3.352558.56673HepG2PPIG
chr2234299109234299146+CDS,intron-Distal,intron-Proximal4.738344.58968K562PRPF8
chr2234357020234357072+CDS,intron-Proximal3.928056.34662HepG2PRPF8
chr2234356921234356998+CDS,intron-Proximal3.017607.89702HepG2GRWD1
chr2234296988234297011+CDS,intron-Distal3.242564.25541HepG2GRWD1
chr2234299048234299117+CDS,intron-Distal,intron-Proximal3.638324.24220K562ZNF622
chr2234343458234343544+CDS3.674488.46997HepG2PPIG
chr2234354311234354375+CDS3.008195.22569HepG2GRWD1
chr2234354322234354356+CDS3.673686.13978HepG2PPIG
chr2234350623234350641+CDS4.305923.82000HepG2GRWD1
chr2234346972234347016+CDS3.588727.10944HepG2PPIG
chr2234356792234356827+CDS4.056587.58497HepG2GRWD1
chr2234356745234356822+CDS4.011344.12464HepG2UCHL5
chr2234355436234355495+CDS,intron-Proximal3.848787.29769HepG2PRPF8
chr2234344960234345019+CDS,intron-Proximal3.593398.09841HepG2BUD13
chr2234296966234296988+CDS,intron-Distal3.377614.25541HepG2GRWD1
chr2234359568234359632+CDS4.7128511.38699HepG2PPIG
chr2234344961234345021+CDS,intron-Proximal4.2168510.68105HepG2BCLAF1
chr2234354268234354311+CDS,intron-Proximal4.027727.11560HepG2GRWD1
chr2234354400234354446+CDS,intron-Proximal5.233479.27403HepG2PRPF8
chr2234361885234361970+intron-Distal3.392574.08528HepG2SUGP2
chr2234355733234355800+intron-Distal3.385563.37567HepG2HNRNPK
chr2234306187234306276+intron-Distal5.2650210.04448HepG2FAM120A
chr2234305722234305823+intron-Distal4.235416.00449HepG2FAM120A
chr2234372307234372457+intron-Distal3.811689.55893HepG2XPO5
chr2234375962234376054+intron-Distal5.6261812.58138HepG2RBFOX2
chr2234372291234372462+intron-Distal8.0517362.60833K562AGGF1
chr2234366312234366321+intron-Distal4.834434.34633HepG2EFTUD2
chr2234264977234265067+intron-Distal3.812485.45871HepG2HNRNPM
chr2234366280234366368+intron-Distal3.636646.02098HepG2PRPF4
chr2234306388234306526+intron-Distal3.509155.71679HepG2FAM120A
chr2234304225234304297+intron-Distal3.909343.09122HepG2PTBP1
chr2234372292234372433+intron-Distal3.3860619.28038HepG2AGGF1
chr2234367102234367164+intron-Distal,intron-Proximal4.297043.97974HepG2RBFOX2
chr2234360927234361067+intron-Distal4.173508.48132HepG2RBFOX2
chr2234376076234376139+intron-Distal5.062308.52926HepG2RBFOX2
chr2234376875234376900+intron-Distal4.212083.45219HepG2RBFOX2
chr2234372286234372428+intron-Distal3.316123.20628K562HNRNPL
chr2234371747234371815+intron-Distal5.290987.88553HepG2AGGF1
chr2234361240234361312+intron-Distal4.477345.25173HepG2RBFOX2
chr2234366043234366090+intron-Distal,intron-Proximal3.622457.19609HepG2EFTUD2
chr2234376900234376987+intron-Distal,intron-Proximal6.5745321.74368HepG2RBFOX2
chr2234306182234306245+intron-Distal4.041304.10323HepG2PRPF4
chr2234376805234376861+intron-Distal3.103884.46036HepG2PRPF8
chr2234372465234372553+intron-Distal3.286514.89059HepG2AGGF1
chr2234376784234376865+intron-Distal5.1368626.46801HepG2RBFOX2
chr2234332083234332140+intron-Distal4.301124.31871HepG2HNRNPM
chr2234372292234372425+intron-Distal3.5094812.48180HepG2HNRNPL
chr2234299146234299177+intron-Distal,intron-Proximal3.859974.58287K562PRPF8
chr2234355647234355741+intron-Distal3.767373.68689HepG2UCHL5
chr2234313539234313607+intron-Distal3.140153.02792HepG2RBFOX2
chr2234308171234308270+intron-Distal4.285187.13447HepG2FAM120A
chr2234305433234305502+intron-Distal3.763383.03048HepG2GTF2F1
chr2234362062234362130+intron-Distal4.300534.86548HepG2SUGP2
chr2234355805234355882+intron-Distal3.571988.07504HepG2HNRNPK
chr2234331247234331327+intron-Distal4.399103.05187HepG2QKI
chr2234277794234277873+intron-Distal4.229533.51329HepG2MATR3
chr2234372333234372396+intron-Distal3.416373.68010HepG2GTF2F1
chr2234278292234278399+intron-Distal3.609967.39230HepG2HNRNPM
chr2234376911234376995+intron-Distal,intron-Proximal3.452595.16423HepG2SF3B4
chr2234372364234372490+intron-Distal3.418354.24143HepG2RBFOX2
chr2234347430234347484+intron-Distal3.065043.00914HepG2PTBP1
chr2234371926234372047+intron-Distal3.039234.45241HepG2HNRNPL
chr2234372003234372038+intron-Distal4.474576.75803K562AGGF1
chr2234356415234356482+intron-Distal3.416423.07769HepG2SRSF1
chr2234368991234369081+intron-Proximal5.612277.63570K562AQR
chr2234365984234366010+intron-Proximal4.363885.98353HepG2EFTUD2
chr2234371163234371263+intron-Proximal5.288086.92529HepG2RBFOX2
chr2234366837234366928+intron-Proximal3.344809.15180HepG2PRPF4
chr2234366843234366889+intron-Proximal3.624878.32573HepG2SF3B4
chr2234345087234345097+intron-Proximal5.030165.17615K562AQR
chr2234377012234377063+intron-Proximal3.936603.01266HepG2SF3B4
chr2234365650234365686+intron-Proximal4.6190613.47152HepG2PRPF8
chr2234345097234345156+intron-Proximal5.492117.28294K562AQR
chr2234372711234372785+intron-Proximal4.568775.31973HepG2SF3B4
chr2234355276234355357+intron-Proximal3.936603.01266HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DGKD is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DGKD is not available on ENCORE database.

  • 61 RBPs can affect the levels of DGKD.  








The Knockdown/knockout RNA-Seq assay for DGKD is not available on ENCORE database.





61 RBPs can affect the gene expression of DGKD :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DGKDENSG00000077044.52335.867601765.927200.403408.064007.13590HepG2ACO1
DGKDENSG00000077044.52058.818501774.199000.214502.299601.59340HepG2AKAP8L
DGKDENSG00000077044.53128.008002752.959900.184202.041501.43500HepG2AUH
DGKDENSG00000077044.51121.18450888.909700.334802.341001.78490HepG2BOP1
DGKDENSG00000077044.5775.27880985.19710-0.345702.774302.00060HepG2CALR
DGKDENSG00000077044.52661.241801860.663700.516203.906202.73490HepG2CCAR1
DGKDENSG00000077044.52123.520901765.513400.266304.094603.31520HepG2CKAP4
DGKDENSG00000077044.51050.705002018.62080-0.942006.848005.90660HepG2DDX3X
DGKDENSG00000077044.51301.48430993.024300.390202.573301.94020HepG2DNAJC2
DGKDENSG00000077044.51082.198301385.42100-0.356402.583201.69000HepG2EEF2
DGKDENSG00000077044.5828.848401124.56530-0.440203.302502.32110HepG2EIF3D
DGKDENSG00000077044.53125.954501793.937700.801107.857706.72820HepG2EIF4B
DGKDENSG00000077044.51741.326801265.730200.460105.000303.95730HepG2FUBP3
DGKDENSG00000077044.52264.686801724.292000.393202.877202.19910HepG2G3BP1
DGKDENSG00000077044.52432.152801831.272300.409303.110202.16590HepG2G3BP2
DGKDENSG00000077044.51362.25540924.977900.558402.720402.08430HepG2GPKOW
DGKDENSG00000077044.53014.609901942.640500.633904.786403.33410HepG2GRSF1
DGKDENSG00000077044.51599.198601151.571400.473607.499706.39390HepG2HNRNPF
DGKDENSG00000077044.52599.358701747.279900.572905.737904.76020HepG2HNRNPK
DGKDENSG00000077044.5942.403501139.10980-0.273502.179601.33550HepG2HNRNPM
DGKDENSG00000077044.51749.426701117.505700.6465014.9702013.65150HepG2HNRNPU
DGKDENSG00000077044.51467.080301133.961600.371502.792602.06540HepG2IGF2BP1
DGKDENSG00000077044.51228.05410782.759200.649607.100305.93930HepG2NSUN2
DGKDENSG00000077044.52332.574401707.712200.449805.429304.62580HepG2PCBP1
DGKDENSG00000077044.52178.628201737.667900.326204.524803.86250HepG2PTBP1
DGKDENSG00000077044.52852.971401680.770800.763209.382508.37420HepG2PUF60
DGKDENSG00000077044.52071.506901784.228700.215303.106502.48720HepG2PUM1
DGKDENSG00000077044.52364.203401782.915300.407005.386904.46520HepG2PUM2
DGKDENSG00000077044.52953.861101881.922500.6503013.9541012.70750HepG2QKI
DGKDENSG00000077044.51861.855702641.92620-0.504809.494208.66430HepG2RBM22
DGKDENSG00000077044.52387.624901801.130600.406607.298206.36830HepG2RECQL
DGKDENSG00000077044.51386.00400995.157100.477807.127406.16210HepG2SAFB2
DGKDENSG00000077044.51448.41750873.687900.729209.527008.29390HepG2SF3B1
DGKDENSG00000077044.52240.363701809.124100.308304.374403.65670HepG2SF3B4
DGKDENSG00000077044.52254.276801611.630600.4840012.0958010.80440HepG2SLBP
DGKDENSG00000077044.52137.946702983.89350-0.4810010.498509.69240HepG2SRFBP1
DGKDENSG00000077044.51364.767001888.33900-0.468508.601107.87270HepG2SRSF1
DGKDENSG00000077044.51893.098101659.535800.189901.969101.42930HepG2SRSF5
DGKDENSG00000077044.51475.489601131.406600.383005.024804.13020HepG2SRSF7
DGKDENSG00000077044.51819.770101536.268700.244202.937202.37200HepG2SRSF9
DGKDENSG00000077044.52738.118501834.965500.577304.150202.77810HepG2STIP1
DGKDENSG00000077044.52437.458001887.332700.368907.464106.52270HepG2SUCLG1
DGKDENSG00000077044.51969.951601697.326800.214802.005601.51520HepG2TAF15
DGKDENSG00000077044.51449.996601095.585200.404205.227904.50200HepG2TRIM56
DGKDENSG00000077044.51130.622101412.38980-0.321002.348301.76530HepG2U2AF1
DGKDENSG00000077044.52261.665201738.121100.379802.932002.07170HepG2UBE2L3
DGKDENSG00000077044.51173.36380688.659300.768708.278506.96650HepG2UCHL5
DGKDENSG00000077044.52073.542901810.302600.195802.252501.61170HepG2UPF1
DGKDENSG00000077044.52146.570501747.775900.296404.171603.46020HepG2UTP3
DGKDENSG00000077044.51572.150201147.687900.453903.162402.38870HepG2XRN2
DGKDENSG00000077044.51664.765401990.98620-0.258203.951703.32940HepG2ZNF622
DGKDENSG00000077044.51709.491701195.920500.515303.563202.07930HepG2ZRANB2
DGKDENSG00000077044.5894.956401288.27730-0.525604.773104.03990K562AQR
DGKDENSG00000077044.5178.66040399.77670-1.162005.684204.58900K562G3BP2
DGKDENSG00000077044.5462.71390613.65280-0.407302.649402.06320K562HNRNPC
DGKDENSG00000077044.5812.76800580.890400.484502.990201.91060K562IGF2BP2
DGKDENSG00000077044.5843.52160610.139000.467204.105603.07620K562MAGOH
DGKDENSG00000077044.5531.36770400.100400.409202.457301.63640K562METAP2
DGKDENSG00000077044.5814.12320592.814700.457604.209303.40630K562PTBP1
DGKDENSG00000077044.5947.693401261.01920-0.412102.739402.14880K562RBM15
DGKDENSG00000077044.5579.43460415.293200.480403.631802.64800K562SF3B4
DGKDENSG00000077044.5756.10490548.994000.461703.076001.95680K562SRSF5
DGKDENSG00000077044.5743.99770588.122400.339102.038601.42510K562TARDBP
DGKDENSG00000077044.5944.73570567.333000.735609.731508.08150K562TIA1
DGKDENSG00000077044.5877.29640556.925100.655506.743304.85610K562TRA2A
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DGKD is not available on ENCORE database.





9 RBPs can affect the splicing of DGKD :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDGKDENSG00000077044.5chr2+2343724652343725572343712882343713812343728092343729290.212000.000000.00001includedHepG2U2AF1
SEDGKDENSG00000077044.5chr2+234355357234355442234354268234354408234356732234356827-0.191000.000530.01209excludedHepG2U2AF1
SEDGKDENSG00000077044.5chr2+2343724652343725572343712882343713812343728092343729290.670000.000000.00000includedHepG2U2AF2
SEDGKDENSG00000077044.5chr2+234356503234356551234355357234355442234356732234356827-0.346000.000190.03754excludedK562DROSHA
SEDGKDENSG00000077044.5chr2+2343724932343725572343712882343713812343728092343729290.123000.001090.03265includedHepG2SF3A3
SEDGKDENSG00000077044.5chr2+2343565032343565512343553572343554422343567322343568270.332000.000220.09268includedHepG2GRSF1
SEDGKDENSG00000077044.5chr2+2343630022343631102343606092343607062343634082343635190.070000.002200.03769includedK562U2AF2
SEDGKDENSG00000077044.5chr2+2343565032343565512343553572343554422343567322343568270.409000.001730.04137includedK562RBM15
SEDGKDENSG00000077044.5chr2+2343565032343565512343553572343554422343567322343568270.269000.004140.08047includedK562AGGF1
SEDGKDENSG00000077044.5chr2+234372493234372557234371288234371381234372809234372929-0.162000.000250.01476excludedHepG2HNRNPU
SEDGKDENSG00000077044.5chr2+234372493234372557234371288234371381234372809234372929-0.183000.000380.01798excludedHepG2HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DGKD is not avaliable on ENCORE database.