CKMT1A

General Information

Gene Name       : CKMT1A
Gene ID             : ENSG00000223572.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CKMT1A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CKMT1AENSG00000223572.90.000.000.00ENCSR000AEF
HepG2CKMT1AENSG00000223572.90.950.280.61ENCSR985KAT
K562CKMT1AENSG00000223572.95.627.206.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CKMT1A is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CKMT1A RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CKMT1A is not avaliable on ENCORE database.






NO known proteins are bound to CKMT1A RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CKMT1A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CKMT1A is not available on ENCORE database.

  • 74 RBPs can affect the levels of CKMT1A.  








The Knockdown/knockout RNA-Seq assay for CKMT1A is not available on ENCORE database.





74 RBPs can affect the gene expression of CKMT1A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CKMT1AENSG00000223572.525.427105.503002.208002.395401.89690HepG2AKAP1
CKMT1AENSG00000223572.575.804207.354103.365607.197105.60980HepG2CCAR1
CKMT1AENSG00000223572.527.789204.354302.673902.189801.58720HepG2CKAP4
CKMT1AENSG00000223572.516.845202.349302.841902.676701.35320HepG2CSTF2T
CKMT1AENSG00000223572.50.5896011.63000-4.302102.697302.06100HepG2CELF1
CKMT1AENSG00000223572.516.201902.485502.704402.398501.76180HepG2DDX21
CKMT1AENSG00000223572.5100.314905.273904.249409.071607.99400HepG2DDX3X
CKMT1AENSG00000223572.522.819904.355302.389302.748902.15770HepG2EIF2S1
CKMT1AENSG00000223572.553.4614011.820602.177104.828103.77060HepG2EIF4G2
CKMT1AENSG00000223572.579.667202.382405.0634018.7753016.33700HepG2FASTKD2
CKMT1AENSG00000223572.514.072600.848204.052302.411701.46990HepG2FTO
CKMT1AENSG00000223572.513.769400.0000099999.999904.000602.66200HepG2GRSF1
CKMT1AENSG00000223572.541.867404.880903.100505.874704.98130HepG2MATR3
CKMT1AENSG00000223572.540.397803.140203.685306.680805.47760HepG2MSI2
CKMT1AENSG00000223572.539.252404.997002.973503.614102.89420HepG2NCBP2
CKMT1AENSG00000223572.520.082601.577903.669803.692802.72920HepG2PARN
CKMT1AENSG00000223572.528.861100.0000099999.999904.569903.03070HepG2PRPF6
CKMT1AENSG00000223572.50.452209.26730-4.357002.186201.61960HepG2QKI
CKMT1AENSG00000223572.516.385200.0000099999.999903.433501.39300HepG2RBM17
CKMT1AENSG00000223572.50.000009.51870-99999.999992.838002.29110HepG2NELFE
CKMT1AENSG00000223572.50.000008.86060-99999.999992.625102.02270HepG2RECQL
CKMT1AENSG00000223572.50.000008.90800-99999.999992.619502.04110HepG2SF3B4
CKMT1AENSG00000223572.513.926300.0000099999.999904.435202.43840HepG2SLTM
CKMT1AENSG00000223572.58.728500.0000099999.999902.872701.89670HepG2SMNDC1
CKMT1AENSG00000223572.50.0000011.68930-99999.999993.382802.70310HepG2SRSF5
CKMT1AENSG00000223572.511.007600.892703.624102.213501.55520HepG2TARDBP
CKMT1AENSG00000223572.543.263301.564404.7893011.3770010.34880HepG2TRIM56
CKMT1AENSG00000223572.50.6188011.56490-4.224202.486001.66110HepG2TUFM
CKMT1AENSG00000223572.50.6371012.23800-4.263702.181501.44380HepG2UBE2L3
CKMT1AENSG00000223572.536.829503.185703.531107.082406.19890HepG2UTP3
CKMT1AENSG00000223572.5261.06270408.60620-0.646304.259502.71970K562ABCF1
CKMT1AENSG00000223572.5114.43050184.33720-0.687903.055902.00920K562AKAP8
CKMT1AENSG00000223572.5577.75530174.559001.726606.019805.03200K562AKAP8L
CKMT1AENSG00000223572.5237.59290393.40050-0.727503.501302.09280K562APOBEC3C
CKMT1AENSG00000223572.590.03430316.07790-1.8117015.7149014.47190K562AQR
CKMT1AENSG00000223572.5364.86800233.276200.645204.593302.83080K562BCCIP
CKMT1AENSG00000223572.516.18890208.64080-3.6879032.7565029.95800K562BOP1
CKMT1AENSG00000223572.5104.27110284.60720-1.4486011.338208.54220K562BUD13
CKMT1AENSG00000223572.5126.68190221.83910-0.808304.522203.52090K562CPSF6
CKMT1AENSG00000223572.5289.15970548.22630-0.9229010.021608.22420K562CELF1
CKMT1AENSG00000223572.5105.63120270.41980-1.356206.948003.95520K562DAZAP1
CKMT1AENSG00000223572.5203.76860332.38730-0.705905.463503.71920K562DDX21
CKMT1AENSG00000223572.5110.98660197.66280-0.832704.995603.20690K562DDX27
CKMT1AENSG00000223572.5123.96040355.48320-1.5199020.4578018.84050K562DDX47
CKMT1AENSG00000223572.5255.30950187.843400.442602.119601.36440K562DKC1
CKMT1AENSG00000223572.593.03610178.83530-0.942803.398101.43550K562DNAJC2
CKMT1AENSG00000223572.5227.10110132.473500.777504.984403.33350K562EIF2S1
CKMT1AENSG00000223572.5103.74780272.12700-1.3912013.7859012.36590K562EIF2S2
CKMT1AENSG00000223572.541.93890159.58350-1.927906.098004.56680K562EIF3A
CKMT1AENSG00000223572.5315.76510119.474401.4020011.907608.71220K562FASTKD2
CKMT1AENSG00000223572.5128.44450293.71180-1.193309.591107.90570K562FIP1L1
CKMT1AENSG00000223572.5106.29780225.72740-1.086506.452005.12410K562FMR1
CKMT1AENSG00000223572.5122.72120191.32920-0.640702.450701.59190K562FTO
CKMT1AENSG00000223572.547.58160104.27530-1.131903.766402.91270K562G3BP2
CKMT1AENSG00000223572.5224.45610397.05110-0.822904.229502.26420K562HNRNPAB
CKMT1AENSG00000223572.5393.02090264.616700.570601.942401.43120K562HNRNPC
CKMT1AENSG00000223572.5210.10490398.21720-0.922407.615306.31320K562HSPD1
CKMT1AENSG00000223572.544.86300155.96850-1.7977012.621909.93190K562IGF2BP3
CKMT1AENSG00000223572.5650.27460475.221100.452403.160801.95080K562MSI2
CKMT1AENSG00000223572.587.74200244.17140-1.476607.733304.41000K562NFX1
CKMT1AENSG00000223572.5302.48220487.68890-0.689105.279003.16570K562NOL12
CKMT1AENSG00000223572.595.11660157.52410-0.727803.141501.70270K562PCBP1
CKMT1AENSG00000223572.5587.30920262.294401.162807.613904.86590K562PRPF6
CKMT1AENSG00000223572.5323.59280517.43730-0.677205.902104.28910K562PUM1
CKMT1AENSG00000223572.5344.70760506.95990-0.556504.490703.25960K562PUM2
CKMT1AENSG00000223572.5309.77470173.120900.839305.423504.69610K562PUS1
CKMT1AENSG00000223572.557.52490116.69730-1.020504.180001.95930K562QKI
CKMT1AENSG00000223572.512.5054099.49430-2.9921011.263308.45430K562RAVER1
CKMT1AENSG00000223572.5328.49070168.675000.961508.204907.21350K562RBM15
CKMT1AENSG00000223572.570.92410150.08510-1.081405.439804.21440K562RBM22
CKMT1AENSG00000223572.576.02550146.32450-0.944604.072502.28600K562RBM34
CKMT1AENSG00000223572.5149.31300283.04080-0.922702.952901.35220K562RBM39
CKMT1AENSG00000223572.558.53080157.94670-1.432208.445806.46350K562NELFE
CKMT1AENSG00000223572.546.58780201.44360-2.1124014.5592012.26540K562SF3B1
CKMT1AENSG00000223572.5102.71760255.48070-1.314507.236604.01700K562SMNDC1
CKMT1AENSG00000223572.5109.70880205.36350-0.904503.041901.95530K562SRFBP1
CKMT1AENSG00000223572.589.05930153.47530-0.785203.158302.40730K562SRSF1
CKMT1AENSG00000223572.588.99920144.95930-0.703802.763101.71540K562SRSF5
CKMT1AENSG00000223572.5202.33950296.67540-0.552103.096201.85310K562SRSF7
CKMT1AENSG00000223572.5111.23660252.95340-1.185206.227102.63890K562SUB1
CKMT1AENSG00000223572.5109.06050289.05570-1.406205.771303.48560K562SUPT6H
CKMT1AENSG00000223572.5139.71130407.01710-1.542602.686201.97770K562UPF1
CKMT1AENSG00000223572.5123.55740245.21260-0.988905.583203.88470K562UTP3
CKMT1AENSG00000223572.5158.38200362.06250-1.192802.076801.33570K562WDR43
CKMT1AENSG00000223572.5578.42960374.471400.627205.557503.72730K562WRN
CKMT1AENSG00000223572.5144.80540247.07990-0.770902.964801.31930K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CKMT1A is not available on ENCORE database.






No RBPs affect the alternative splcing events of CKMT1A on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CKMT1A is not avaliable on ENCORE database.