CAMSAP1

General Information

Gene Name       : CAMSAP1
Gene ID             : ENSG00000130559.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CAMSAP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CAMSAP1ENSG00000130559.185.066.875.96ENCSR000AEF
HepG2CAMSAP1ENSG00000130559.1810.616.938.77ENCSR985KAT
K562CAMSAP1ENSG00000130559.1814.2010.0312.11ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CAMSAP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CAMSAP1 RNA is bound by 36 proteins.  







eCLIP assay for CAMSAP1 is not avaliable on ENCORE database.





36 proteins are bound to CAMSAP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9138701568138701652-3'-UTR,intron-Distal6.7840422.62757K562PUM2
chr9138774670138774728-5'-UTR,CDS,intron-Distal,intron-Proximal3.956479.77514K562LIN28B
chr9138773625138773681-5'-UTR,CDS,intron-Distal,intron-Proximal4.8107211.27671HepG2SF3A3
chr9138773625138773693-5'-UTR,CDS,intron-Distal,intron-Proximal4.392635.52568K562GPKOW
chr9138773604138773689-5'-UTR,CDS,intron-Distal,intron-Proximal5.0770712.70303K562AQR
chr9138773592138773704-5'-UTR,CDS,intron-Distal,intron-Proximal3.841369.31583K562SF3B4
chr9138774645138774663-5'-UTR,CDS,intron-Distal,intron-Proximal5.151279.56266K562AQR
chr9138773488138773597-5'-UTR,CDS,intron-Distal,intron-Proximal3.308863.85127HepG2GRWD1
chr9138773585138773671-5'-UTR,CDS,intron-Distal,intron-Proximal4.354459.07460K562NOLC1
chr9138774666138774714-5'-UTR,CDS,intron-Distal,intron-Proximal5.399458.41725K562NOLC1
chr9138713977138714059-CDS,intron-Distal3.370784.59873K562UCHL5
chr9138774747138774927-CDS,intron-Distal,intron-Proximal4.1997411.50186HepG2GRWD1
chr9138714618138714684-CDS,intron-Distal4.094596.61895K562ZNF622
chr9138714684138714725-CDS,intron-Distal4.398434.77252K562ZNF622
chr9138712839138712875-CDS,intron-Distal4.255564.10264K562ZNF622
chr9138712815138712902-CDS,intron-Distal4.347644.42400K562SLTM
chr9138712845138712900-CDS,intron-Distal3.918415.89622K562FXR2
chr9138712836138712920-CDS,intron-Distal3.463793.77784K562RBM15
chr9138707716138707737-CDS,intron-Distal,intron-Proximal3.662633.04871K562AQR
chr9138709771138709842-CDS,intron-Distal,intron-Proximal5.183716.35567HepG2PRPF8
chr9138714572138714724-CDS,intron-Distal4.9802714.01494K562UCHL5
chr9138774758138774923-CDS,intron-Distal,intron-Proximal5.0389424.41134K562NOLC1
chr9138774822138774844-CDS,intron-Distal,intron-Proximal3.1234312.20084K562YBX3
chr9138706945138706999-CDS,intron-Distal3.400533.73423K562UCHL5
chr9138741907138742010-CDS,intron-Distal,intron-Proximal4.127143.85435K562PRPF8
chr9138714646138714732-CDS,intron-Distal3.722425.03105K562BUD13
chr9138714180138714252-CDS,intron-Distal4.670815.14565K562UCHL5
chr9138710352138710378-CDS,intron-Distal4.021033.04254K562UCHL5
chr9138712641138712710-CDS,intron-Distal,intron-Proximal4.847415.01842HepG2PRPF8
chr9138714633138714681-CDS,intron-Distal3.689143.02919K562GRWD1
chr9138723911138723962-intron-Distal4.403793.30687K562EXOSC5
chr9138740288138740361-intron-Distal4.733213.72755K562EIF4G2
chr9138768929138769073-intron-Distal4.026233.04182K562HNRNPM
chr9138779554138779608-intron-Distal3.785723.06347K562NONO
chr9138782004138782165-intron-Distal5.8114616.19652K562TARDBP
chr9138786019138786079-intron-Distal3.874555.89423HepG2HNRNPM
chr9138707461138707512-intron-Distal4.315506.11036HepG2XPO5
chr9138774517138774585-intron-Distal,intron-Proximal3.881165.29272K562BUD13
chr9138748452138748519-intron-Distal3.764843.50894K562SAFB2
chr9138780961138781009-intron-Distal3.508685.05066K562HNRNPM
chr9138731569138731664-intron-Distal4.305413.97018HepG2HNRNPM
chr9138794201138794257-intron-Distal3.834683.07980HepG2HNRNPM
chr9138725612138725667-intron-Distal4.903797.06230K562EXOSC5
chr9138793948138794078-intron-Distal3.138543.64681K562EXOSC5
chr9138780667138780723-intron-Distal4.053456.77622K562HNRNPM
chr9138748972138749019-intron-Distal4.158393.36882K562SLTM
chr9138781107138781168-intron-Distal4.4299010.58232K562HNRNPM
chr9138780612138780657-intron-Distal3.074273.10883HepG2SUGP2
chr9138748445138748510-intron-Distal5.082397.32644K562SLTM
chr9138766675138766763-intron-Distal3.759475.35459K562KHSRP
chr9138781719138781786-intron-Distal3.740064.87826HepG2MATR3
chr9138798480138798555-intron-Distal3.187904.50730K562AKAP8L
chr9138786405138786511-intron-Distal5.2439510.33470HepG2SUGP2
chr9138728130138728200-intron-Distal5.654988.53131K562EIF4G2
chr9138771173138771232-intron-Distal3.985843.79098HepG2SUGP2
chr9138758523138758589-intron-Distal4.288733.59909K562EXOSC5
chr9138780278138780325-intron-Distal4.025973.84389HepG2SUGP2
chr9138784978138785021-intron-Distal6.0788610.98212K562PTBP1
chr9138785067138785108-intron-Distal4.243305.16181K562PTBP1
chr9138787244138787335-intron-Distal4.457215.83842HepG2SUGP2
chr9138781724138781769-intron-Distal3.183717.31566K562HNRNPM
chr9138785931138785986-intron-Distal5.111198.39553K562HNRNPM
chr9138730817138730894-intron-Distal3.772383.22972K562TARDBP
chr9138749879138749956-intron-Distal4.070803.59941K562UCHL5
chr9138782688138782771-intron-Distal3.618094.80898K562HNRNPM
chr9138774598138774645-intron-Distal,intron-Proximal4.4161111.08359K562AQR
chr9138755582138755749-intron-Distal4.200303.65854HepG2RBFOX2
chr9138785941138786105-intron-Distal5.8193613.97739HepG2SUGP2
chr9138796871138797038-intron-Distal3.899103.05187HepG2QKI
chr9138781109138781162-intron-Distal4.358863.97018HepG2HNRNPM
chr9138729251138729325-intron-Distal5.217007.07160K562EIF4G2
chr9138786909138786944-intron-Distal3.957213.63454HepG2SUGP2
chr9138739661138739714-intron-Distal4.656214.35687HepG2DDX59
chr9138739990138740063-intron-Distal3.321834.09735K562ILF3
chr9138765171138765223-intron-Distal3.214543.43875K562EXOSC5
chr9138752750138752886-intron-Distal4.350504.38969K562YWHAG
chr9138709259138709355-intron-Distal4.187797.97087HepG2XPO5
chr9138740267138740384-intron-Distal3.797375.34807K562ILF3
chr9138781728138781785-intron-Distal4.426514.51299HepG2SUGP2
chr9138784982138785019-intron-Distal4.466075.07733HepG2PTBP1
chr9138749905138749993-intron-Distal3.974524.58695K562SLTM
chr9138785202138785237-intron-Distal4.644334.40618K562PTBP1
chr9138780980138781019-intron-Distal3.053543.10640HepG2SUGP2
chr9138724242138724277-intron-Distal4.307473.30687K562EXOSC5
chr9138785021138785067-intron-Distal6.3701814.59132K562PTBP1
chr9138706400138706460-intron-Distal4.571914.84986K562GTF2F1
chr9138785515138785567-intron-Distal4.138543.01445K562EXOSC5
chr9138707695138707716-intron-Distal,intron-Proximal4.819794.13847K562AQR
chr9138774029138774110-intron-Distal5.4631913.21172K562LIN28B
chr9138784326138784387-intron-Distal4.325387.22321K562PTBP1
chr9138771640138771776-intron-Distal4.651656.36768K562HNRNPM
chr9138783335138783415-intron-Distal3.406534.60009HepG2SUGP2
chr9138755654138755708-intron-Distal3.358863.11000HepG2HNRNPM
chr9138782083138782123-intron-Distal4.127733.79098HepG2SUGP2
chr9138782020138782066-intron-Distal4.341033.30696K562EXOSC5
chr9138785668138785750-intron-Distal4.428794.80466K562EXOSC5
chr9138709778138709823-intron-Distal,intron-Proximal4.916114.13847K562AQR
chr9138798677138798793-intron-Distal3.791023.17740K562CSTF2T
chr9138740274138740365-intron-Distal4.130054.48935K562CSTF2T
chr9138754726138754793-intron-Distal3.038093.77382HepG2HNRNPM
chr9138785814138785860-intron-Distal4.739365.31171K562HNRNPM
chr9138774061138774110-intron-Distal3.095513.11824K562NOLC1
chr9138798537138798638-intron-Distal3.957133.54147K562HNRNPM
chr9138755167138755227-intron-Distal4.533965.02084HepG2HNRNPM
chr9138764903138764958-intron-Distal3.796253.04224HepG2SUGP2
chr9138786969138787022-intron-Distal4.662905.01910HepG2MATR3
chr9138724776138724869-intron-Distal5.5045110.67022K562EXOSC5
chr9138785674138785734-intron-Distal4.405604.51299HepG2SUGP2
chr9138785944138785992-intron-Distal4.386094.38558HepG2HNRNPM
chr9138728824138728936-intron-Distal4.585446.45754K562TARDBP
chr9138785019138785102-intron-Distal3.472106.71645HepG2PTBP1
chr9138766932138767044-intron-Distal4.028853.71802K562RBFOX2
chr9138766572138766671-intron-Distal5.034289.39339K562KHSRP
chr9138736435138736481-intron-Distal4.288733.59909K562EXOSC5
chr9138736716138736750-intron-Distal4.283293.01445K562EXOSC5
chr9138739667138739726-intron-Distal4.671425.14122HepG2PCBP2
chr9138786084138786138-intron-Distal4.730126.45442HepG2HNRNPM
chr9138798425138798520-intron-Distal4.602385.59615K562NONO
chr9138781767138781807-intron-Distal3.931396.64193HepG2HNRNPM
chr9138758548138758671-intron-Distal5.212137.23521HepG2HNRNPM
chr9138786870138787037-intron-Distal4.290047.92343K562MATR3
chr9138786085138786190-intron-Distal5.4699012.04872K562HNRNPM
chr9138758529138758699-intron-Distal4.213088.81047K562HNRNPM
chr9138781769138781809-intron-Distal5.132088.94476K562HNRNPM
chr9138728042138728104-intron-Distal5.648257.07160K562EIF4G2
chr9138786012138786108-intron-Distal4.162906.71533HepG2MATR3
chr9138780440138780493-intron-Distal3.892223.31905K562NONO
chr9138774110138774162-intron-Distal3.085193.68457K562LIN28B
chr9138786511138786553-intron-Distal4.091593.84389HepG2SUGP2
chr9138785986138786085-intron-Distal5.1513819.15951K562HNRNPM
chr9138794574138794614-intron-Distal4.068453.59909K562EXOSC5
chr9138793729138793822-intron-Distal4.061753.78162K562HNRNPM
chr9138780674138780717-intron-Distal4.730124.38558HepG2HNRNPM
chr9138786340138786380-intron-Distal4.259724.51377K562HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CAMSAP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CAMSAP1 is not available on ENCORE database.

  • 53 RBPs can affect the levels of CAMSAP1.  








The Knockdown/knockout RNA-Seq assay for CAMSAP1 is not available on ENCORE database.





53 RBPs can affect the gene expression of CAMSAP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CAMSAP1ENSG00000130559.14462.22430690.85000-0.579804.270703.30370HepG2ASCC1
CAMSAP1ENSG00000130559.14957.502601161.07500-0.278102.853102.15780HepG2AUH
CAMSAP1ENSG00000130559.14527.04000676.28560-0.359702.494701.75940HepG2CALR
CAMSAP1ENSG00000130559.141057.41560739.894600.515104.459203.60430HepG2CPSF6
CAMSAP1ENSG00000130559.141081.22200755.182500.517707.332106.38050HepG2CELF1
CAMSAP1ENSG00000130559.141118.25730710.693500.653904.563103.69160HepG2EIF4B
CAMSAP1ENSG00000130559.141701.491801333.154900.351904.381203.65510HepG2ETF1
CAMSAP1ENSG00000130559.14561.89020800.41250-0.510503.727203.00650HepG2HNRNPLL
CAMSAP1ENSG00000130559.14463.44000590.99640-0.350802.728702.12580HepG2HNRNPU
CAMSAP1ENSG00000130559.14874.66010694.402600.332901.949201.37340HepG2IGF2BP2
CAMSAP1ENSG00000130559.14858.34260675.261600.346001.971101.35300HepG2PABPC4
CAMSAP1ENSG00000130559.14670.73340527.119600.347502.743302.00870HepG2PPIL4
CAMSAP1ENSG00000130559.14829.85530673.341200.301402.573402.04280HepG2PTBP1
CAMSAP1ENSG00000130559.141141.30720815.900500.484108.535307.61410HepG2PUM1
CAMSAP1ENSG00000130559.141279.39280815.291100.650009.770708.54990HepG2PUM2
CAMSAP1ENSG00000130559.14616.40330754.09540-0.290902.490301.89770HepG2PUS1
CAMSAP1ENSG00000130559.14979.67100729.194700.425904.233103.48450HepG2QKI
CAMSAP1ENSG00000130559.14852.36280644.403500.403402.622601.65820HepG2RBM27
CAMSAP1ENSG00000130559.141004.35060749.344500.422504.699304.02880HepG2NELFE
CAMSAP1ENSG00000130559.14910.17940697.948200.382903.978303.25640HepG2RECQL
CAMSAP1ENSG00000130559.141384.23010997.955800.471904.615503.76440HepG2RPLP0
CAMSAP1ENSG00000130559.14862.61220498.385700.791309.945408.86860HepG2RPS19
CAMSAP1ENSG00000130559.14804.70030594.305200.437102.932902.11000HepG2RPS2
CAMSAP1ENSG00000130559.14829.63410700.992700.243001.815301.31950HepG2SF3B4
CAMSAP1ENSG00000130559.14755.56120613.745500.299802.813302.16490HepG2SMN1
CAMSAP1ENSG00000130559.141184.57350852.465500.474602.937201.90190HepG2SRSF3
CAMSAP1ENSG00000130559.14767.47640595.293400.366403.719603.10060HepG2SRSF9
CAMSAP1ENSG00000130559.141239.51010863.038200.522209.387408.35740HepG2SUCLG1
CAMSAP1ENSG00000130559.14884.86750574.221000.623807.625006.87050HepG2TIAL1
CAMSAP1ENSG00000130559.14986.55030750.902800.393703.468402.47820HepG2TUFM
CAMSAP1ENSG00000130559.141428.97210813.375500.8129011.122509.83960HepG2U2AF1
CAMSAP1ENSG00000130559.141875.25210773.119901.278204.832703.50280HepG2U2AF2
CAMSAP1ENSG00000130559.141066.63090794.842000.424202.721401.89130HepG2UBE2L3
CAMSAP1ENSG00000130559.14685.66900910.39150-0.409004.836703.95440HepG2UPF1
CAMSAP1ENSG00000130559.141041.12050878.946000.244202.268301.71460HepG2UTP3
CAMSAP1ENSG00000130559.14943.21710794.548800.247402.279701.66260HepG2ZC3H8
CAMSAP1ENSG00000130559.14766.461401001.25530-0.385505.152704.46440HepG2ZNF622
CAMSAP1ENSG00000130559.142680.532601888.546200.5051011.8717010.78780K562AGGF1
CAMSAP1ENSG00000130559.142334.085901965.143800.248102.036501.47330K562AKAP8L
CAMSAP1ENSG00000130559.141478.762801013.889100.544406.889105.64370K562CPSF6
CAMSAP1ENSG00000130559.14879.21340706.926700.314602.296601.35150K562CSTF2
CAMSAP1ENSG00000130559.142917.643101860.508300.6490017.8903016.36160K562DDX47
CAMSAP1ENSG00000130559.141784.931602114.47340-0.244402.224601.45060K562DKC1
CAMSAP1ENSG00000130559.141059.71630681.954700.635803.694002.51320K562EIF3A
CAMSAP1ENSG00000130559.141227.01970912.913300.426502.648601.63760K562EIF3D
CAMSAP1ENSG00000130559.141028.00060741.271600.471704.806703.77260K562EIF3G
CAMSAP1ENSG00000130559.142590.120002069.141100.323904.025202.89430K562EIF4G2
CAMSAP1ENSG00000130559.141433.366401858.97380-0.375103.687502.81870K562GRSF1
CAMSAP1ENSG00000130559.141160.847301410.30450-0.280802.676401.79830K562HNRNPU
CAMSAP1ENSG00000130559.141240.910501650.67140-0.411703.659802.74890K562HSPD1
CAMSAP1ENSG00000130559.141364.670801005.472400.440602.964501.89220K562IGF2BP2
CAMSAP1ENSG00000130559.142456.647402085.418100.236302.128101.41480K562KIF1C
CAMSAP1ENSG00000130559.141029.506201382.11340-0.424903.634202.67530K562PPIG
CAMSAP1ENSG00000130559.141260.241701026.453700.295902.411901.78490K562PTBP1
CAMSAP1ENSG00000130559.142527.732101948.698700.375203.560902.95640K562PUS1
CAMSAP1ENSG00000130559.141301.32350845.207300.622505.373204.23070K562RPS19
CAMSAP1ENSG00000130559.14989.13000737.761600.422904.108503.06040K562SF3B4
CAMSAP1ENSG00000130559.141371.167301006.292900.446304.833203.90340K562SRSF1
CAMSAP1ENSG00000130559.141059.77430803.248800.399702.435701.48710K562SUPV3L1
CAMSAP1ENSG00000130559.141220.26180964.115600.339802.451201.43650K562TRA2A
CAMSAP1ENSG00000130559.141301.10020687.644100.9199011.154808.76640K562U2AF1
CAMSAP1ENSG00000130559.141419.09920710.373900.9982021.5190019.24820K562U2AF2
CAMSAP1ENSG00000130559.141179.699001748.97880-0.5681012.0516010.68370K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CAMSAP1 is not available on ENCORE database.





5 RBPs can affect the splicing of CAMSAP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECAMSAP1ENSG00000130559.14chr9-138754312138754454138742167138742307138758301138758382-0.425000.000320.07397excludedK562WDR43
SECAMSAP1ENSG00000130559.14chr9-138758301138758382138719252138719430138773478138773640-0.310000.003610.04838excludedK562PUS1
MXECAMSAP1ENSG00000130559.14chr9-138741982138742010138758301138758382138719252138719430138773478138773640-0.257000.004040.030062includedK562AQR
MXECAMSAP1ENSG00000130559.14chr9-138741982138742079138754312138754454138719252138719430138758301138758382-0.087000.004990.030402includedHepG2U2AF2
MXECAMSAP1ENSG00000130559.14chr9-1387543121387544541387583011387583821387421671387423071387734781387736400.275000.004660.061361includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CAMSAP1 is not avaliable on ENCORE database.