BLVRA

General Information

Gene Name       : BLVRA
Gene ID             : ENSG00000106605.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BLVRA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BLVRAENSG00000106605.1054.9762.6758.82ENCSR000AEF
HepG2BLVRAENSG00000106605.1052.2668.1860.22ENCSR985KAT
K562BLVRAENSG00000106605.1046.3846.4346.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BLVRA is not avaliable on ENCORE database.



Proteins bound to RNA
  • BLVRA RNA is bound by 8 proteins.  







eCLIP assay for BLVRA is not avaliable on ENCORE database.





8 proteins are bound to BLVRA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr74384681043846910+3'-UTR,CDS4.4367410.68247K562PABPC4
chr74384682243846900+3'-UTR,CDS3.118863.07411K562LIN28B
chr74384677843846905+3'-UTR,CDS4.611005.18898HepG2LARP4
chr74381073643810764+5'-UTR,CDS,intron-Proximal4.342944.26442K562DDX3X
chr74379828843798333+5'-UTR4.271725.23852K562DDX3X
chr74382750143827626+CDS,intron-Proximal3.244185.97777HepG2PPIG
chr74384662643846684+CDS4.367214.27202K562PABPC4
chr74382750943827577+CDS4.548833.86664K562DDX3X
chr74384670443846755+CDS3.943213.45613K562PABPC4
chr74384016943840216+CDS,intron-Proximal4.618604.48002K562AQR
chr74384662743846650+CDS4.134043.86978K562YBX3
chr74384340843843447+CDS,intron-Proximal4.251684.88315K562GRWD1
chr74382752243827591+CDS4.673816.26332HepG2GRWD1
chr74384665043846674+CDS4.290954.07825K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BLVRA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BLVRA is not available on ENCORE database.

  • 70 RBPs can affect the levels of BLVRA.  








The Knockdown/knockout RNA-Seq assay for BLVRA is not available on ENCORE database.





70 RBPs can affect the gene expression of BLVRA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BLVRAENSG00000106605.61013.02320658.612100.6211010.745609.71080HepG2ACO1
BLVRAENSG00000106605.6675.45110486.904000.472102.836801.78630HepG2AKAP8
BLVRAENSG00000106605.61765.576401123.222100.6524014.3677013.01830HepG2AUH
BLVRAENSG00000106605.6244.05050338.92450-0.473802.353501.79630HepG2BOP1
BLVRAENSG00000106605.6824.22480658.538900.323703.256402.54550HepG2CKAP4
BLVRAENSG00000106605.61054.76040663.115100.669504.041403.11100HepG2CNOT7
BLVRAENSG00000106605.61838.941901074.757500.7748019.9507018.54380HepG2CELF1
BLVRAENSG00000106605.61883.122601055.440000.8352010.923909.75690HepG2DDX3X
BLVRAENSG00000106605.6870.08060647.241700.426702.064301.38620HepG2DDX55
BLVRAENSG00000106605.6516.03270630.13140-0.288201.967501.38090HepG2DKC1
BLVRAENSG00000106605.6586.76830963.20770-0.715106.345105.38100HepG2EIF4A3
BLVRAENSG00000106605.6792.382901092.07630-0.462802.831302.00900HepG2EIF4G2
BLVRAENSG00000106605.61084.128301289.63610-0.250402.486201.91180HepG2ETF1
BLVRAENSG00000106605.6646.82510475.228300.444703.092702.26500HepG2FUBP3
BLVRAENSG00000106605.6716.66540957.04900-0.417302.855101.94790HepG2G3BP2
BLVRAENSG00000106605.6251.12790359.29800-0.516802.646001.77080HepG2GEMIN5
BLVRAENSG00000106605.6426.59680613.88000-0.525102.659201.57000HepG2GRSF1
BLVRAENSG00000106605.6350.34730500.39560-0.514303.305502.60760HepG2HNRNPA1
BLVRAENSG00000106605.6267.86110556.59070-1.0551011.320909.99750HepG2HNRNPC
BLVRAENSG00000106605.6575.74390699.21650-0.280302.037301.41500HepG2HNRNPF
BLVRAENSG00000106605.6728.95140977.59330-0.423402.592101.98000HepG2MATR3
BLVRAENSG00000106605.6688.85490891.13830-0.371402.193001.54460HepG2PABPC4
BLVRAENSG00000106605.6276.20120493.15390-0.836308.754707.49010HepG2PPIL4
BLVRAENSG00000106605.6767.354001093.73370-0.511303.762503.07930HepG2PUF60
BLVRAENSG00000106605.6839.652801161.12310-0.467705.173004.41460HepG2PUM1
BLVRAENSG00000106605.61205.09540956.698300.332903.071402.41920HepG2QKI
BLVRAENSG00000106605.6820.51030543.985500.592902.035001.42180HepG2RAVER1
BLVRAENSG00000106605.6673.80330506.644500.411302.903902.02730HepG2RBM15
BLVRAENSG00000106605.6654.89600983.11050-0.586107.974307.14000HepG2NELFE
BLVRAENSG00000106605.6725.00340915.65370-0.336803.129402.47930HepG2RECQL
BLVRAENSG00000106605.6287.13320392.66370-0.451602.503901.91650HepG2RPS19
BLVRAENSG00000106605.6345.65840721.57880-1.0618012.3011010.07210HepG2RPS5
BLVRAENSG00000106605.6830.52360493.712100.750305.857704.75760HepG2RRP9
BLVRAENSG00000106605.6413.78900627.16450-0.599903.765702.24570HepG2SART3
BLVRAENSG00000106605.6845.054701048.87720-0.311702.491501.82060HepG2SLBP
BLVRAENSG00000106605.6705.58700574.223900.297102.596201.97000HepG2SMN1
BLVRAENSG00000106605.6623.69060370.694700.750504.109403.14780HepG2SNRNP70
BLVRAENSG00000106605.61736.948701217.429000.5126010.008009.21560HepG2SRFBP1
BLVRAENSG00000106605.6470.766501056.99930-1.1669030.9653029.67210HepG2SSB
BLVRAENSG00000106605.6220.97160328.09350-0.570203.010602.25830HepG2TARDBP
BLVRAENSG00000106605.6632.25100452.699000.481803.003002.34920HepG2U2AF1
BLVRAENSG00000106605.61444.785201131.238200.352902.324401.56180HepG2UBE2L3
BLVRAENSG00000106605.6592.53630380.553300.638704.599403.61630HepG2UCHL5
BLVRAENSG00000106605.6562.43220426.008100.400703.423302.66060HepG2UPF1
BLVRAENSG00000106605.6481.63380373.570000.366502.724302.05740HepG2ZC3H8
BLVRAENSG00000106605.61185.27480918.261000.368103.091502.40000K562AKAP8L
BLVRAENSG00000106605.6729.211601309.46950-0.8446011.6391010.55700K562AQR
BLVRAENSG00000106605.6161.36550284.40650-0.817605.282203.72020K562CCAR1
BLVRAENSG00000106605.61332.802101054.580200.337703.293601.99240K562CCDC124
BLVRAENSG00000106605.6868.97260676.099200.362003.570302.19290K562DDX21
BLVRAENSG00000106605.6578.96380735.32750-0.344903.070801.66960K562DDX27
BLVRAENSG00000106605.6856.34490724.500800.241101.873101.31740K562DDX47
BLVRAENSG00000106605.61403.913001014.885000.468006.661805.61670K562EIF2S2
BLVRAENSG00000106605.6632.48180849.89870-0.426303.350102.45060K562EIF4A3
BLVRAENSG00000106605.6291.86520536.78380-0.879007.636305.62200K562FKBP4
BLVRAENSG00000106605.6700.61790883.85900-0.335202.913402.29500K562FXR1
BLVRAENSG00000106605.6508.64560690.23480-0.440402.290901.65540K562G3BP2
BLVRAENSG00000106605.6152.90360618.32810-2.0158036.8116034.71200K562HNRNPC
BLVRAENSG00000106605.6352.76050552.15710-0.646405.497903.81660K562HNRNPF
BLVRAENSG00000106605.6612.20440405.264500.595004.115902.96460K562HNRNPM
BLVRAENSG00000106605.61039.07330667.951600.637406.534905.32710K562HSPD1
BLVRAENSG00000106605.61229.23440974.478600.335002.557701.76860K562KIF1C
BLVRAENSG00000106605.6393.80610551.32920-0.485403.353501.62230K562LSM11
BLVRAENSG00000106605.6794.42320994.54750-0.324102.510301.70790K562MAGOH
BLVRAENSG00000106605.6447.75290603.67200-0.431102.733901.32380K562PHF6
BLVRAENSG00000106605.6751.93410559.329400.426803.060002.19080K562PPIG
BLVRAENSG00000106605.6397.74800554.39290-0.479102.973802.03120K562PSIP1
BLVRAENSG00000106605.61278.710901625.81640-0.346503.199502.32320K562PUF60
BLVRAENSG00000106605.61130.84270887.296200.349803.489602.83610K562RBM15
BLVRAENSG00000106605.6647.63690926.54210-0.516704.742103.60780K562RBM22
BLVRAENSG00000106605.6912.19590707.982800.365502.083501.37910K562RPS19
BLVRAENSG00000106605.6387.93390542.04710-0.482602.753201.75280K562RPS3
BLVRAENSG00000106605.6979.29500710.652400.462502.595901.31110K562RRP9
BLVRAENSG00000106605.6291.55520393.66930-0.433202.291301.31240K562SAFB
BLVRAENSG00000106605.6538.70930693.88590-0.365203.320102.30580K562SRPK2
BLVRAENSG00000106605.6485.67390672.92030-0.470402.893201.85210K562SUPV3L1
BLVRAENSG00000106605.6340.67610443.13870-0.379402.189201.45810K562SYNCRIP
BLVRAENSG00000106605.6418.55420566.47730-0.436602.808401.85370K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BLVRA is not available on ENCORE database.





4 RBPs can affect the splicing of BLVRA :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBLVRAENSG00000106605.6chr7+4379961543799709437982854379833343810736438107690.052000.004390.05633includedK562PUS1
SEBLVRAENSG00000106605.6chr7+4379961543799709437982854379833343810736438107690.052000.003490.08546includedK562UTP18
SEBLVRAENSG00000106605.6chr7+4379961543799709437982854379833343810736438107690.281000.000000.00000includedHepG2HNRNPC
SEBLVRAENSG00000106605.6chr7+4379961543799709437982854379833343810736438107690.592000.000000.00001includedK562HNRNPC
MXEBLVRAENSG00000106605.6chr7+4381073643810769438275024382762443798278437983334383084743830967-0.210000.009780.091032includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BLVRA is not avaliable on ENCORE database.