ARRDC2

General Information

Gene Name       : ARRDC2
Gene ID             : ENSG00000105643.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARRDC2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARRDC2ENSG00000105643.92.942.942.94ENCSR000AEF
HepG2ARRDC2ENSG00000105643.93.792.633.21ENCSR985KAT
K562ARRDC2ENSG00000105643.911.288.529.90ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARRDC2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARRDC2 RNA is bound by 6 proteins.  







eCLIP assay for ARRDC2 is not avaliable on ENCORE database.





6 proteins are bound to ARRDC2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191812462918124712+3'-UTR3.906954.87320K562UPF1
chr191812439918124503+3'-UTR5.360409.60749K562UPF1
chr191812428518124396+3'-UTR3.485726.98582K562UPF1
chr191811200618112075+5'-UTR5.477477.65756K562DGCR8
chr191811202218112066+5'-UTR4.163783.95034K562DROSHA
chr191811207518112172+5'-UTR,CDS6.5015422.15066K562DGCR8
chr191811898418119092+5'-UTR,intron-Distal,intron-Proximal4.791335.91582K562NONO
chr191811237418112407+CDS,intron-Proximal3.340583.12664K562DGCR8
chr191811222618112290+CDS3.776814.90166K562DGCR8
chr191811229018112356+CDS4.394048.53964K562DGCR8
chr191811222718112348+CDS6.098978.47410K562DROSHA
chr191811335618113424+intron-Distal3.139713.58549K562NONO
chr191811819418118270+intron-Distal,intron-Proximal3.442574.34865K562NONO
chr191811315318113192+intron-Distal4.266633.34538K562DGCR8
chr191811309618113182+intron-Distal3.336703.61097K562ILF3
chr191811779018117835+intron-Distal4.155844.33692K562NONO
chr191812051318120592+intron-Proximal4.011033.31322HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARRDC2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARRDC2 is not available on ENCORE database.

  • 79 RBPs can affect the levels of ARRDC2.  








The Knockdown/knockout RNA-Seq assay for ARRDC2 is not available on ENCORE database.





79 RBPs can affect the gene expression of ARRDC2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARRDC2ENSG00000105643.5252.73330128.450500.976307.799806.88270HepG2ACO1
ARRDC2ENSG00000105643.5257.18970106.955801.265707.251906.43590HepG2AKAP1
ARRDC2ENSG00000105643.5208.32530117.342900.828003.787302.57290HepG2AKAP8
ARRDC2ENSG00000105643.5217.97730129.071000.755904.498803.53780HepG2AKAP8L
ARRDC2ENSG00000105643.5199.7172088.487901.174306.360505.19240HepG2ASCC1
ARRDC2ENSG00000105643.5264.82800160.786900.719804.627803.77960HepG2AUH
ARRDC2ENSG00000105643.5152.7724085.564100.836202.530801.63670HepG2BCCIP
ARRDC2ENSG00000105643.5153.7800097.126400.662802.470101.73830HepG2CALR
ARRDC2ENSG00000105643.5186.55400128.443100.538402.425801.79490HepG2CKAP4
ARRDC2ENSG00000105643.5341.16380147.723901.207507.334606.09450HepG2CNOT7
ARRDC2ENSG00000105643.5316.31830151.306901.063803.625202.90920HepG2CELF1
ARRDC2ENSG00000105643.555.14050110.67700-1.005203.529902.77140HepG2DDX21
ARRDC2ENSG00000105643.5232.01590102.436201.179406.845305.90420HepG2DDX3X
ARRDC2ENSG00000105643.5189.6667084.130401.172704.971103.97140HepG2DDX55
ARRDC2ENSG00000105643.5198.0925081.899601.274103.037502.01440HepG2DDX59
ARRDC2ENSG00000105643.5353.2110088.040302.0042019.9860018.52910HepG2DDX6
ARRDC2ENSG00000105643.567.28830122.89760-0.869003.251802.52740HepG2DKC1
ARRDC2ENSG00000105643.5167.6711084.590200.987004.127603.41230HepG2EIF2S1
ARRDC2ENSG00000105643.542.6722093.46020-1.131103.451302.73850HepG2EIF4A3
ARRDC2ENSG00000105643.5244.90810160.510700.609503.152302.26980HepG2EIF4G1
ARRDC2ENSG00000105643.556.09220125.40470-1.160704.545303.17970HepG2ESF1
ARRDC2ENSG00000105643.5280.98250184.628000.605803.506402.84200HepG2ETF1
ARRDC2ENSG00000105643.5118.0445069.785200.758202.636301.49770HepG2FAM120A
ARRDC2ENSG00000105643.5272.24480146.164700.897204.340603.39360HepG2FIP1L1
ARRDC2ENSG00000105643.5283.5998087.501301.6964014.7565013.27820HepG2G3BP1
ARRDC2ENSG00000105643.5165.0608088.684100.896203.569702.78220HepG2HNRNPK
ARRDC2ENSG00000105643.5182.1674083.507501.125202.571201.62470HepG2IGF2BP3
ARRDC2ENSG00000105643.5236.9080094.914401.319507.777406.76140HepG2MATR3
ARRDC2ENSG00000105643.5171.5204097.141400.820103.184602.50750HepG2NCBP2
ARRDC2ENSG00000105643.5252.28750161.362500.644703.054302.25380HepG2NOL12
ARRDC2ENSG00000105643.5385.19650135.014001.5124011.015409.21800HepG2PABPC1
ARRDC2ENSG00000105643.5166.7505096.532100.788503.749002.78080HepG2PARN
ARRDC2ENSG00000105643.5169.1861094.917900.833804.228003.50550HepG2PCBP1
ARRDC2ENSG00000105643.5185.2718096.585600.939705.289304.58320HepG2PTBP1
ARRDC2ENSG00000105643.5307.51980163.378500.912406.561905.54530HepG2PUM2
ARRDC2ENSG00000105643.5264.0814087.320501.596508.879907.66290HepG2RAVER1
ARRDC2ENSG00000105643.5340.42080148.844101.1934011.402709.84310HepG2RBM15
ARRDC2ENSG00000105643.5373.29110154.310001.2744013.6689012.69170HepG2RBM22
ARRDC2ENSG00000105643.5149.8439094.931900.658402.391901.76010HepG2RBM25
ARRDC2ENSG00000105643.5179.98280103.576600.797102.842801.75230HepG2RPS5
ARRDC2ENSG00000105643.5175.1368064.181201.448206.913105.73300HepG2RRP9
ARRDC2ENSG00000105643.5172.57920108.691400.666902.098301.50990HepG2SF3A3
ARRDC2ENSG00000105643.5126.7032077.237300.714002.315201.66670HepG2SF3B1
ARRDC2ENSG00000105643.5154.84550100.552500.622802.327201.77880HepG2SF3B4
ARRDC2ENSG00000105643.5361.06300174.279001.0508010.614109.80440HepG2SRFBP1
ARRDC2ENSG00000105643.5254.94830152.060300.745503.427002.74340HepG2SRSF5
ARRDC2ENSG00000105643.5198.9289085.390401.220009.215008.31210HepG2SRSF9
ARRDC2ENSG00000105643.520.83910151.30050-2.8601021.9674020.82430HepG2SSB
ARRDC2ENSG00000105643.5209.96710127.303000.721803.124701.76450HepG2SSRP1
ARRDC2ENSG00000105643.5199.63890129.015800.629702.539701.49190HepG2STIP1
ARRDC2ENSG00000105643.5148.0416081.600300.859302.578901.42140HepG2SUB1
ARRDC2ENSG00000105643.5106.1112056.128800.918702.799701.79960HepG2TFIP11
ARRDC2ENSG00000105643.5198.0004095.601601.050307.270506.43220HepG2TRIM56
ARRDC2ENSG00000105643.5268.35590125.048701.101606.955705.97040HepG2U2AF1
ARRDC2ENSG00000105643.5316.8265073.473602.108307.949906.19440HepG2U2AF2
ARRDC2ENSG00000105643.594.5371049.467800.934302.809402.04330HepG2UCHL5
ARRDC2ENSG00000105643.551.9486086.90340-0.742301.968201.38650HepG2ZC3H8
ARRDC2ENSG00000105643.5476.24030370.964200.360301.958101.40580K562AKAP8L
ARRDC2ENSG00000105643.51475.81360834.683700.8221011.7285010.64270K562AQR
ARRDC2ENSG00000105643.5551.21510426.045900.371502.485401.37970K562CCDC124
ARRDC2ENSG00000105643.5781.90240588.168200.410704.082202.72110K562CPEB4
ARRDC2ENSG00000105643.51335.442001084.601000.300102.473201.55200K562CELF1
ARRDC2ENSG00000105643.5831.79590608.691100.450405.119204.27090K562DDX47
ARRDC2ENSG00000105643.5517.21090399.180600.373602.684201.82530K562DKC1
ARRDC2ENSG00000105643.5623.06120381.858300.706205.815704.46090K562EFTUD2
ARRDC2ENSG00000105643.5587.21030408.737500.522602.949401.87820K562EIF3D
ARRDC2ENSG00000105643.5416.19120277.910500.582504.501403.49650K562EIF3G
ARRDC2ENSG00000105643.5483.52020309.747000.642404.945703.84440K562EIF4A3
ARRDC2ENSG00000105643.5380.57820278.927300.448202.914001.72190K562EIF4B
ARRDC2ENSG00000105643.51340.53380882.078000.603709.761308.03690K562EIF4G2
ARRDC2ENSG00000105643.5754.81030503.381300.584405.298004.09800K562FIP1L1
ARRDC2ENSG00000105643.5203.87620300.57560-0.560002.703401.59220K562FKBP4
ARRDC2ENSG00000105643.5492.64910322.120900.612905.372704.56780K562FXR1
ARRDC2ENSG00000105643.5662.14800514.526500.363802.778501.63560K562GLRX3
ARRDC2ENSG00000105643.5545.62780326.329800.741507.249605.86080K562MAGOH
ARRDC2ENSG00000105643.5444.16110325.642600.447702.954701.99730K562MATR3
ARRDC2ENSG00000105643.5569.42820441.025600.368602.378001.54420K562MBNL1
ARRDC2ENSG00000105643.5493.37080290.322500.764906.631505.09830K562PCBP2
ARRDC2ENSG00000105643.5589.28920371.595000.665104.811603.82650K562PRPF8
ARRDC2ENSG00000105643.5519.77190317.062200.713007.048706.02520K562PTBP1
ARRDC2ENSG00000105643.5667.03200303.934401.1339015.8230013.61830K562RBM22
ARRDC2ENSG00000105643.5601.96600378.426500.669604.457603.41710K562RPS19
ARRDC2ENSG00000105643.5300.54990187.391600.681403.095602.03120K562RPS3
ARRDC2ENSG00000105643.5551.49170379.848200.537802.623301.33190K562RRP9
ARRDC2ENSG00000105643.5737.93670593.062800.315202.285401.53840K562SF3A3
ARRDC2ENSG00000105643.5440.19430194.901001.1753014.9096012.80060K562SF3B4
ARRDC2ENSG00000105643.5813.98650607.601300.421803.737202.66850K562SRPK2
ARRDC2ENSG00000105643.5497.70270310.845200.679005.825604.80800K562SRSF1
ARRDC2ENSG00000105643.5717.72550314.555601.1900016.5673014.54940K562TARDBP
ARRDC2ENSG00000105643.5414.41730303.434900.449602.759501.94290K562TIA1
ARRDC2ENSG00000105643.5345.35110187.653000.879907.568706.23750K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARRDC2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ARRDC2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ARRDC2 is not avaliable on ENCORE database.