ALG13

General Information

Gene Name       : ALG13
Gene ID             : ENSG00000101901.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ALG13)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ALG13ENSG00000101901.1173.7958.8266.31ENCSR000AEF
HepG2ALG13ENSG00000101901.1122.3229.5825.95ENCSR985KAT
K562ALG13ENSG00000101901.1160.4278.5869.50ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ALG13 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ALG13 RNA is bound by 26 proteins.  







eCLIP assay for ALG13 is not avaliable on ENCORE database.





26 proteins are bound to ALG13 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX110931239110931298+3'-UTR,intron-Distal4.078054.66738K562KHDRBS1
chrX110928195110928229+5'-UTR,CDS3.593569.17534K562U2AF2
chrX110928192110928233+5'-UTR,CDS,intron-Proximal3.427885.95375K562ZNF622
chrX110928191110928195+5'-UTR,CDS,intron-Proximal3.515698.80785K562U2AF2
chrX110925508110925523+5'-UTR,CDS,intron-Proximal3.391523.87732K562U2AF1
chrX110925501110925523+5'-UTR,CDS,intron-Proximal3.043193.55138K562ZNF622
chrX110928189110928225+5'-UTR,CDS,intron-Proximal3.691615.36788K562U2AF1
chrX110928190110928280+5'-UTR,CDS,intron-Proximal3.433244.13112K562SRSF1
chrX110928192110928225+5'-UTR,CDS,intron-Proximal3.740343.62357HepG2U2AF2
chrX110968236110968287+CDS5.071696.64300K562ZNF622
chrX110931105110931157+CDS,intron-Distal,intron-Proximal6.2660518.48619K562U2AF1
chrX110967088110967133+CDS,intron-Proximal4.430564.04372HepG2BCLAF1
chrX110978292110978335+CDS4.220583.71613K562UCHL5
chrX110931103110931155+CDS,intron-Distal,intron-Proximal3.980799.29186HepG2U2AF2
chrX110971510110971533+CDS4.040583.36385K562UCHL5
chrX110970087110970177+CDS3.127068.71478K562DDX24
chrX110970955110971000+CDS,intron-Proximal3.212024.37507K562DDX24
chrX110970920110971001+CDS,intron-Proximal3.828453.25205K562GRWD1
chrX110970239110970281+CDS3.236224.74755K562ZNF622
chrX110928315110928354+CDS,intron-Proximal4.130113.02457HepG2BCLAF1
chrX110967072110967117+CDS3.170594.62864K562ZNF622
chrX110967041110967120+CDS3.592014.17944K562BUD13
chrX110967025110967071+CDS,intron-Proximal5.220984.75872K562DDX24
chrX110956433110956480+CDS,intron-Proximal3.747894.50744HepG2U2AF2
chrX110966035110966075+CDS,intron-Distal3.906383.02457HepG2BCLAF1
chrX110970834110970888+CDS,intron-Proximal3.150453.46826K562U2AF1
chrX110951421110951485+CDS,intron-Distal4.066617.07404HepG2U2AF2
chrX110955659110955740+CDS,intron-Proximal4.195694.42765K562SF3B4
chrX110971411110971470+CDS,intron-Proximal3.416075.33841K562DDX24
chrX110971476110971533+CDS3.275886.36421K562ZNF622
chrX110961360110961399+CDS4.255567.93948K562ZNF622
chrX110961399110961501+CDS3.9374415.32636K562ZNF622
chrX110961374110961503+CDS,intron-Proximal4.0774813.60283K562UCHL5
chrX110978308110978348+CDS4.163254.12139K562DDX24
chrX110970827110970893+CDS,intron-Proximal3.498515.85184K562U2AF2
chrX110963325110963395+CDS4.147917.23632K562UCHL5
chrX110970958110970998+CDS3.644366.84505K562ZNF622
chrX110961073110961122+CDS,intron-Proximal3.255286.73886K562ZNF622
chrX110951398110951479+CDS,intron-Distal3.773044.59413K562PCBP1
chrX110956429110956497+CDS,intron-Proximal3.729243.47293K562U2AF2
chrX110968229110968289+CDS3.306144.59873K562UCHL5
chrX110961020110961104+CDS,intron-Proximal5.195695.90023K562SF3B4
chrX110979943110979995+CDS3.946775.20093K562DDX24
chrX110951424110951481+CDS,intron-Distal4.018183.88460HepG2PCBP2
chrX110931105110931157+CDS,intron-Distal,intron-Proximal5.3990822.78340K562U2AF2
chrX110935256110935310+intron-Distal4.350195.01208K562MATR3
chrX110945927110945981+intron-Distal5.199888.23486K562MATR3
chrX110944144110944192+intron-Distal4.9107027.28587K562EXOSC5
chrX110943311110943346+intron-Distal3.7791810.01558K562EXOSC5
chrX110944703110944763+intron-Distal3.466613.48890K562KHSRP
chrX110968364110968448+intron-Distal,intron-Proximal3.441295.98045K562KHSRP
chrX110945535110945608+intron-Distal4.004577.54890HepG2SUGP2
chrX110944773110944838+intron-Distal3.351875.96782K562MATR3
chrX110946438110946514+intron-Distal4.253288.12131K562MATR3
chrX110945880110945973+intron-Distal6.3957117.51063K562PTBP1
chrX110946460110946508+intron-Distal3.302083.23702K562PTBP1
chrX110944911110944953+intron-Distal3.350196.52950K562MATR3
chrX110944533110944592+intron-Distal4.318719.51317K562HNRNPM
chrX110945364110945449+intron-Distal4.6576813.55501K562KHSRP
chrX110935159110935256+intron-Distal3.031485.54972K562MATR3
chrX110944440110944475+intron-Distal5.093768.36828K562EXOSC5
chrX110943494110943550+intron-Distal4.0812114.47840K562EXOSC5
chrX110942609110942636+intron-Distal3.772284.91037K562EXOSC5
chrX110945143110945175+intron-Distal3.606677.26545K562EXOSC5
chrX110948121110948167+intron-Distal4.199863.82619K562ILF3
chrX110944492110944523+intron-Distal4.743985.76606K562EXOSC5
chrX110945142110945194+intron-Distal3.023534.40773HepG2SUGP2
chrX110944537110944589+intron-Distal4.332633.97018HepG2HNRNPM
chrX110945872110945927+intron-Distal3.619147.56487K562MATR3
chrX110997614110997698+intron-Distal4.033664.15306K562SAFB2
chrX110935445110935497+intron-Distal4.609563.91475K562PTBP1
chrX110942804110942851+intron-Distal3.061823.18966K562MATR3
chrX110941328110941371+intron-Distal3.638557.21887K562KHSRP
chrX110930940110930993+intron-Distal4.239364.10688K562KHSRP
chrX110945885110945935+intron-Distal3.234584.89779HepG2PTBP1
chrX110947275110947313+intron-Distal3.272063.61097K562ILF3
chrX110947914110947993+intron-Distal4.956686.66835K562ILF3
chrX110943653110943686+intron-Distal3.606037.27613K562HNRNPM
chrX110943132110943183+intron-Distal5.8346912.98926K562EXOSC5
chrX110944321110944383+intron-Distal4.173187.80309K562HNRNPM
chrX110949098110949159+intron-Distal4.7758510.52606K562PTBP1
chrX110975366110975426+intron-Distal4.170795.51743K562QKI
chrX110944896110944983+intron-Distal4.936828.54663K562PTBP1
chrX110941371110941415+intron-Distal4.312149.85516K562KHSRP
chrX110944957110945044+intron-Distal3.143745.28181HepG2MATR3
chrX110928365110928479+intron-Distal,intron-Proximal4.1189410.78474HepG2PCBP2
chrX110941227110941294+intron-Distal3.075198.00348K562KHSRP
chrX110945447110945502+intron-Distal4.727615.31529HepG2SUGP2
chrX110945712110945762+intron-Distal3.104274.63722K562MATR3
chrX110944315110944376+intron-Distal4.690088.51158K562EXOSC5
chrX110935344110935490+intron-Distal4.1576312.84261K562MATR3
chrX110946088110946140+intron-Distal3.270024.08528HepG2SUGP2
chrX110943498110943548+intron-Distal4.088734.28663HepG2SUGP2
chrX110930875110930940+intron-Distal3.480214.93120K562KHSRP
chrX110945537110945587+intron-Distal3.809205.72424K562MATR3
chrX110943186110943203+intron-Distal4.667985.12361K562EXOSC5
chrX110955761110955877+intron-Distal,intron-Proximal3.585914.48980K562PRPF8
chrX110943820110943863+intron-Distal3.389227.66059K562EXOSC5
chrX110941471110941547+intron-Distal3.052008.75085K562KHSRP
chrX110947764110947810+intron-Distal3.266673.84723K562ILF3
chrX110928529110928635+intron-Distal5.4917322.79657K562TARDBP
chrX110944953110945084+intron-Distal4.3415519.45354K562MATR3
chrX110946198110946277+intron-Distal3.637915.42643HepG2MATR3
chrX110972677110972755+intron-Distal4.704635.71021K562TARDBP
chrX110947717110947764+intron-Distal4.137963.57189K562ILF3
chrX110937606110937723+intron-Distal3.135609.31374K562QKI
chrX110942641110942679+intron-Distal3.509028.85745K562EXOSC5
chrX110943637110943653+intron-Distal3.425496.31832K562HNRNPM
chrX110975426110975487+intron-Distal4.844753.78039K562QKI
chrX110945013110945037+intron-Distal4.653416.08869K562EXOSC5
chrX110945935110945979+intron-Distal3.927955.36899HepG2PTBP1
chrX110944259110944321+intron-Distal5.4143811.30381K562HNRNPM
chrX110975363110975474+intron-Distal4.333804.05848HepG2QKI
chrX110946220110946282+intron-Distal5.285558.59780K562MATR3
chrX110943588110943627+intron-Distal4.038399.08614K562EXOSC5
chrX110945465110945500+intron-Distal3.275974.46778K562EXOSC5
chrX110928351110928477+intron-Distal,intron-Proximal4.1271410.05012K562PRPF8
chrX110944540110944585+intron-Distal4.8448013.19705K562EXOSC5
chrX110944271110944374+intron-Distal4.962097.78465HepG2HNRNPM
chrX110937672110937724+intron-Distal4.002323.50357HepG2QKI
chrX110956397110956443+intron-Proximal4.869655.58150K562SF3B4
chrX110955791110955857+intron-Proximal3.347564.13525K562RBFOX2
chrX110968313110968364+intron-Proximal3.431034.08064K562KHSRP
chrX110928359110928412+intron-Proximal3.908325.52744K562RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ALG13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ALG13 is not available on ENCORE database.

  • 52 RBPs can affect the levels of ALG13.  








The Knockdown/knockout RNA-Seq assay for ALG13 is not available on ENCORE database.





52 RBPs can affect the gene expression of ALG13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ALG13ENSG00000101901.6541.23460382.193500.501904.860104.09660HepG2ACO1
ALG13ENSG00000101901.6719.70360480.649800.582303.705103.10170HepG2AKAP1
ALG13ENSG00000101901.6476.46180383.939100.311401.961801.30140HepG2AKAP8L
ALG13ENSG00000101901.6478.79080626.13020-0.387103.125002.44960HepG2CELF1
ALG13ENSG00000101901.6527.39390673.24450-0.352203.229602.43980HepG2DAZAP1
ALG13ENSG00000101901.6498.32110361.174400.464302.346201.62760HepG2DDX55
ALG13ENSG00000101901.6520.67050395.519600.396501.819201.30800HepG2DDX6
ALG13ENSG00000101901.6480.30550636.25770-0.405702.496101.72090HepG2EIF4G2
ALG13ENSG00000101901.6985.27970691.575800.510506.764305.89310HepG2ETF1
ALG13ENSG00000101901.6389.95640276.135600.497802.866702.06650HepG2FUBP3
ALG13ENSG00000101901.6594.40470393.274500.595804.071303.27250HepG2G3BP1
ALG13ENSG00000101901.6450.42020629.70340-0.483402.427901.82410HepG2GPKOW
ALG13ENSG00000101901.6328.39170433.45120-0.400502.009101.40780HepG2HNRNPC
ALG13ENSG00000101901.6371.86710501.26430-0.430803.374002.58830HepG2HNRNPF
ALG13ENSG00000101901.6570.38220398.237500.518203.400302.62880HepG2HNRNPK
ALG13ENSG00000101901.6507.42240613.27450-0.273301.971101.39020HepG2HNRNPL
ALG13ENSG00000101901.6359.46400493.60240-0.457503.289802.50590HepG2IGF2BP1
ALG13ENSG00000101901.6501.94790667.58780-0.411403.348702.51050HepG2NOL12
ALG13ENSG00000101901.6500.68340390.764100.357502.522201.93580HepG2PCBP1
ALG13ENSG00000101901.6475.55220637.27080-0.422302.935502.32450HepG2PUF60
ALG13ENSG00000101901.6510.29170675.99680-0.405703.067802.36070HepG2PUM2
ALG13ENSG00000101901.6629.12420430.617100.546804.913404.11690HepG2QKI
ALG13ENSG00000101901.6700.25300578.032800.276601.780801.34130HepG2RBM22
ALG13ENSG00000101901.6300.53670383.46270-0.351502.122301.54500HepG2SAFB2
ALG13ENSG00000101901.6533.43150413.962100.365702.565301.99200HepG2SF3B4
ALG13ENSG00000101901.6491.42580611.04270-0.314302.453301.78690HepG2SLBP
ALG13ENSG00000101901.6803.59400652.872700.299602.631702.13830HepG2SRFBP1
ALG13ENSG00000101901.6464.40210629.21170-0.438203.975603.24910HepG2SRSF5
ALG13ENSG00000101901.6386.38190492.47490-0.350002.428101.77310HepG2SRSF7
ALG13ENSG00000101901.6470.87420351.539600.421603.285902.69500HepG2SRSF9
ALG13ENSG00000101901.6452.61880566.85850-0.324702.313301.83510HepG2SSB
ALG13ENSG00000101901.6491.32740715.58740-0.542406.506805.62350HepG2SUCLG1
ALG13ENSG00000101901.6555.36460388.407200.515804.470803.78420HepG2TAF15
ALG13ENSG00000101901.6320.92250427.15090-0.412502.991802.29830HepG2ZC3H8
ALG13ENSG00000101901.6549.77810457.827400.263901.837501.36680HepG2ZNF622
ALG13ENSG00000101901.61099.516901450.48390-0.399703.549002.90100K562AQR
ALG13ENSG00000101901.6905.472601205.72760-0.413204.129003.16970K562CPSF6
ALG13ENSG00000101901.61182.674401370.37670-0.212501.985701.41670K562DDX47
ALG13ENSG00000101901.6445.02770630.60420-0.502803.441602.41910K562EFTUD2
ALG13ENSG00000101901.6608.21640735.76960-0.274702.060901.36620K562EIF3G
ALG13ENSG00000101901.6603.92200786.54530-0.381202.767101.94580K562EIF4A3
ALG13ENSG00000101901.6937.93790637.416300.557204.520403.01340K562FKBP4
ALG13ENSG00000101901.61226.96850876.678300.484903.080202.32680K562G3BP2
ALG13ENSG00000101901.6927.211701151.14810-0.312102.300401.57630K562GPKOW
ALG13ENSG00000101901.61061.34370847.041300.325302.573601.53680K562HNRNPA1
ALG13ENSG00000101901.6863.682601238.44270-0.520005.805404.21900K562HNRNPL
ALG13ENSG00000101901.6778.74900990.03590-0.346302.741101.90590K562MAGOH
ALG13ENSG00000101901.6861.240701107.46240-0.362804.990704.03000K562NSUN2
ALG13ENSG00000101901.6869.92360688.387400.337602.363801.36810K562SAFB
ALG13ENSG00000101901.6845.742201092.84140-0.369803.788002.84240K562SF3A3
ALG13ENSG00000101901.6678.67180911.46090-0.425504.042103.00110K562SF3B4
ALG13ENSG00000101901.61357.422601119.644900.277703.333002.31640K562SRPK2
ALG13ENSG00000101901.6572.98410942.93370-0.718709.105707.83140K562SRSF1
ALG13ENSG00000101901.6676.23100954.35110-0.497004.207503.32970K562TARDBP
ALG13ENSG00000101901.61000.165301174.26900-0.231502.078801.44970K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ALG13 is not available on ENCORE database.





21 RBPs can affect the splicing of ALG13 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEALG13ENSG00000101901.6chrX+110971412110971533110970850110970998110973622110973655-0.365000.000000.00000excludedK562SRSF1
SEALG13ENSG00000101901.6chrX+110967025110967126110963322110963398110968161110968289-0.266000.006820.09366excludedK562SF3B4
SEALG13ENSG00000101901.6chrX+110954902110954953110952192110952276110955711110955758-0.380000.006820.09358excludedK562SF3B4
SEALG13ENSG00000101901.6chrX+110967025110967126110963322110963398110968161110968289-0.156000.000240.01006excludedK562AKAP8L
SEALG13ENSG00000101901.6chrX+110929364110929402110928192110928331110931114110931297-0.194000.000070.00365excludedK562AKAP8L
SEALG13ENSG00000101901.6chrX+110964830110964939110963322110963398110966020110966085-0.135000.002530.02663excludedK562AQR
SEALG13ENSG00000101901.6chrX+110971412110971533110970841110970998110973622110973655-0.069000.003550.03506excludedK562AQR
SEALG13ENSG00000101901.6chrX+1109311141109312761109281921109283311109323141109324250.223000.000890.09635includedK562DROSHA
SEALG13ENSG00000101901.6chrX+1109311141109312811109281921109283311109512541109516210.358000.000010.00042includedK562PUS1
SEALG13ENSG00000101901.6chrX+110971412110971533110970841110970998110973622110973655-0.058000.000510.00974excludedK562PUS1
SEALG13ENSG00000101901.6chrX+110966020110966085110964830110964939110967025110967126-0.111000.002020.03031excludedK562PUS1
SEALG13ENSG00000101901.6chrX+110929364110929402110928192110928331110931114110931281-0.188000.000000.00013excludedK562PUS1
SEALG13ENSG00000101901.6chrX+1109293641109294021109281921109283311109311141109312970.099000.001680.08677includedHepG2FTO
SEALG13ENSG00000101901.6chrX+1109293641109294021109281921109283311109311141109312810.133000.000020.00502includedHepG2LARP4
SEALG13ENSG00000101901.6chrX+110929364110929402110928192110928331110931114110931297-0.088000.001450.08324excludedK562HNRNPL
SEALG13ENSG00000101901.6chrX+1109311141109312761109281921109283311109323141109324250.234000.001630.09021includedK562HNRNPUL1
SEALG13ENSG00000101901.6chrX+110967025110967126110963322110963398110968161110968289-0.249000.000000.00005excludedK562UTP18
SEALG13ENSG00000101901.6chrX+110929364110929402110928192110928331110931114110931281-0.178000.000180.00928excludedK562UTP18
SEALG13ENSG00000101901.6chrX+110954902110954953110952192110952276110955711110955758-0.702000.000000.00001excludedK562U2AF2
SEALG13ENSG00000101901.6chrX+110987895110988132110979941110980107110996017110996058-0.186000.007200.09567excludedK562U2AF2
SEALG13ENSG00000101901.6chrX+110966020110966085110963322110963398110967025110967126-0.264000.005830.08152excludedK562U2AF2
SEALG13ENSG00000101901.6chrX+110987895110988132110979941110980107110996017110996058-0.260000.001000.03789excludedK562TARDBP
SEALG13ENSG00000101901.6chrX+110964830110964939110963322110963398110966020110966085-0.274000.001200.04329excludedK562HNRNPU
SEALG13ENSG00000101901.6chrX+110966020110966085110964869110964939110967025110967126-0.174000.000310.01080excludedK562RBM15
SEALG13ENSG00000101901.6chrX+110929364110929402110928192110928331110931114110931281-0.165000.000980.02693excludedK562RBM15
SEALG13ENSG00000101901.6chrX+110967025110967126110963322110963398110968161110968289-0.221000.000010.00056excludedK562AGGF1
SEALG13ENSG00000101901.6chrX+110954902110954953110952192110952276110955711110955758-0.235000.004560.08661excludedK562AGGF1
SEALG13ENSG00000101901.6chrX+1109293641109294021109281921109283311109311141109312970.102000.000140.02286includedK562CPSF6
SEALG13ENSG00000101901.6chrX+1109293641109294021109281921109283311109311141109312970.192000.000010.02493includedHepG2GTF2F1
SEALG13ENSG00000101901.6chrX+1109293641109294021109281921109283311109311141109312970.214000.000160.01541includedHepG2SRSF9
SEALG13ENSG00000101901.6chrX+110929364110929402110928192110928331110931114110931281-0.089000.004750.06676excludedK562HNRNPC
A3SSALG13ENSG00000101901.6chrX+1109632951109633981109633221109633981109613391109615020.078000.006250.03517longerK562AQR
A3SSALG13ENSG00000101901.6chrX+1109253191109255221109253591109255221109244161109245270.064000.000440.00335longerK562AQR
A3SSALG13ENSG00000101901.6chrX+1110029381110031271110029611110031271110008601110009900.069000.007660.04201longerK562AQR
A3SSALG13ENSG00000101901.6chrX+1109713881109715331109714121109715331109708411109709980.056000.016010.07901longerK562AQR
MXEALG13ENSG00000101901.6chrX+110971412110971533110973622110973655110970870110970998110978278110978350-0.065000.005660.076242includedK562PUS1
MXEALG13ENSG00000101901.6chrX+1109705831109706731109708411109709981109700771109702831109714121109715330.068000.006360.043921includedK562AQR
MXEALG13ENSG00000101901.6chrX+1109799411109801071109878951109881321109737521109738081109960171109960580.180000.003880.046401includedK562U2AF2
MXEALG13ENSG00000101901.6chrX+110971412110971533110979941110980107110970841110970998110996017110996058-0.152000.001640.039002includedK562TARDBP
MXEALG13ENSG00000101901.6chrX+1109311141109312811109512541109516211109281921109283311109521921109522760.168000.000010.005961includedK562APOBEC3C
MXEALG13ENSG00000101901.6chrX+1109648301109649391109670251109671261109633221109633981109681611109682890.107000.003700.052951includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ALG13 is not avaliable on ENCORE database.