ALG13

General Information

Gene Name : ALG13
Gene ID : ENSG00000101901.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ALG13)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ALG13	ENSG00000101901.11	73.79	58.82	66.31	ENCSR000AEF
HepG2	ALG13	ENSG00000101901.11	22.32	29.58	25.95	ENCSR985KAT
K562	ALG13	ENSG00000101901.11	60.42	78.58	69.50	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ALG13 is not avaliable on ENCORE database.

Proteins bound to RNA

ALG13 RNA is bound by 26 proteins.

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eCLIP assay for ALG13 is not avaliable on ENCORE database.

26 proteins are bound to ALG13 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	110944144	110944192	+	intron-Distal	4.91070	27.28587	K562	EXOSC5
chrX	110928529	110928635	+	intron-Distal	5.49173	22.79657	K562	TARDBP
chrX	110931105	110931157	+	CDS,intron-Distal,intron-Proximal	5.39908	22.78340	K562	U2AF2
chrX	110944953	110945084	+	intron-Distal	4.34155	19.45354	K562	MATR3
chrX	110931105	110931157	+	CDS,intron-Distal,intron-Proximal	6.26605	18.48619	K562	U2AF1
chrX	110945880	110945973	+	intron-Distal	6.39571	17.51063	K562	PTBP1
chrX	110961399	110961501	+	CDS	3.93744	15.32636	K562	ZNF622
chrX	110943494	110943550	+	intron-Distal	4.08121	14.47840	K562	EXOSC5
chrX	110961374	110961503	+	CDS,intron-Proximal	4.07748	13.60283	K562	UCHL5
chrX	110945364	110945449	+	intron-Distal	4.65768	13.55501	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 124 entries

eCLIP assay for ALG13 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ALG13 is not available on ENCORE database.
52 RBPs can affect the levels of ALG13.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ALG13 is not available on ENCORE database.

52 RBPs can affect the gene expression of ALG13 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ALG13	ENSG00000101901.6	572.98410	942.93370	-0.71870	9.10570	7.83140	K562	SRSF1
ALG13	ENSG00000101901.6	985.27970	691.57580	0.51050	6.76430	5.89310	HepG2	ETF1
ALG13	ENSG00000101901.6	491.32740	715.58740	-0.54240	6.50680	5.62350	HepG2	SUCLG1
ALG13	ENSG00000101901.6	863.68260	1238.44270	-0.52000	5.80540	4.21900	K562	HNRNPL
ALG13	ENSG00000101901.6	629.12420	430.61710	0.54680	4.91340	4.11690	HepG2	QKI
ALG13	ENSG00000101901.6	541.23460	382.19350	0.50190	4.86010	4.09660	HepG2	ACO1
ALG13	ENSG00000101901.6	861.24070	1107.46240	-0.36280	4.99070	4.03000	K562	NSUN2
ALG13	ENSG00000101901.6	555.36460	388.40720	0.51580	4.47080	3.78420	HepG2	TAF15
ALG13	ENSG00000101901.6	676.23100	954.35110	-0.49700	4.20750	3.32970	K562	TARDBP
ALG13	ENSG00000101901.6	594.40470	393.27450	0.59580	4.07130	3.27250	HepG2	G3BP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 55 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ALG13 is not available on ENCORE database.

21 RBPs can affect the splicing of ALG13 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ALG13	ENSG00000101901.6	chrX	+	110971412	110971533			110970850	110970998	110973622	110973655	-0.36500	0.00000	0.00000	excluded	K562	SRSF1
SE	ALG13	ENSG00000101901.6	chrX	+	110929364	110929402			110928192	110928331	110931114	110931281	-0.18800	0.00000	0.00013	excluded	K562	PUS1
SE	ALG13	ENSG00000101901.6	chrX	+	110967025	110967126			110963322	110963398	110968161	110968289	-0.24900	0.00000	0.00005	excluded	K562	UTP18
SE	ALG13	ENSG00000101901.6	chrX	+	110954902	110954953			110952192	110952276	110955711	110955758	-0.70200	0.00000	0.00001	excluded	K562	U2AF2
SE	ALG13	ENSG00000101901.6	chrX	+	110931114	110931281			110928192	110928331	110951254	110951621	0.35800	0.00001	0.00042	included	K562	PUS1
SE	ALG13	ENSG00000101901.6	chrX	+	110967025	110967126			110963322	110963398	110968161	110968289	-0.22100	0.00001	0.00056	excluded	K562	AGGF1
SE	ALG13	ENSG00000101901.6	chrX	+	110929364	110929402			110928192	110928331	110931114	110931297	0.19200	0.00001	0.02493	included	HepG2	GTF2F1
MXE	ALG13	ENSG00000101901.6	chrX	+	110931114	110931281	110951254	110951621	110928192	110928331	110952192	110952276	0.16800	0.00001	0.00596	1included	K562	APOBEC3C
SE	ALG13	ENSG00000101901.6	chrX	+	110929364	110929402			110928192	110928331	110931114	110931281	0.13300	0.00002	0.00502	included	HepG2	LARP4
SE	ALG13	ENSG00000101901.6	chrX	+	110929364	110929402			110928192	110928331	110931114	110931297	-0.19400	0.00007	0.00365	excluded	K562	AKAP8L

Showing 1 to 10 of 41 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ALG13

General Information

Functions

Localization

Domains (AlphaFold: ALG13)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ALG13 is not avaliable on ENCORE database.

26 proteins are bound to ALG13 RNA:

eCLIP assay for ALG13 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ALG13 is not available on ENCORE database.

52 RBPs can affect the gene expression of ALG13 :

The Knockdown/knockout RNA-Seq assay for ALG13 is not available on ENCORE database.

21 RBPs can affect the splicing of ALG13 :

The Knockdown/knockout RNA-Seq assay for ALG13 is not avaliable on ENCORE database.