ABCG5

General Information

Gene Name : ABCG5
Gene ID : ENSG00000138075.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ABCG5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ABCG5	ENSG00000138075.12	0.00	0.00	0.00	ENCSR000AEF
HepG2	ABCG5	ENSG00000138075.12	10.82	11.33	11.07	ENCSR985KAT
K562	ABCG5	ENSG00000138075.12	0.00	0.01	0.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ABCG5 is not avaliable on ENCORE database.

Proteins bound to RNA

ABCG5 RNA is bound by 21 proteins.

eCLIP assay for ABCG5 is not avaliable on ENCORE database.

21 proteins are bound to ABCG5 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	44051134	44051174	-	3'-UTR,CDS,intron-Distal	3.28992	7.33138	HepG2	BCLAF1
chr2	44040268	44040325	-	3'-UTR,CDS,intron-Distal	3.94405	4.50744	HepG2	U2AF2
chr2	44051140	44051177	-	3'-UTR,CDS,intron-Distal	3.99018	3.28046	HepG2	ZC3H11A
chr2	44051239	44051257	-	3'-UTR,CDS,intron-Distal	3.69475	8.25092	HepG2	BCLAF1
chr2	44047133	44047194	-	3'-UTR,CDS,intron-Distal	3.08953	4.95657	HepG2	LSM11
chr2	44055125	44055180	-	5'-UTR,CDS,intron-Distal	3.06085	3.49429	HepG2	SRSF1
chr2	44065863	44065927	-	5'-UTR,intron-Distal,intron-Proximal	3.50072	7.80135	HepG2	EFTUD2
chr2	44055132	44055173	-	5'-UTR,CDS,intron-Distal	3.09856	3.20279	HepG2	LSM11
chr2	44065060	44065179	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.97975	15.04211	HepG2	AQR
chr2	44055125	44055178	-	5'-UTR,CDS,intron-Distal	3.57381	8.57574	HepG2	PPIG
chr2	44065096	44065166	-	5'-UTR,intron-Distal,intron-Proximal	4.28953	9.75000	HepG2	SF3B4
chr2	44065295	44065401	-	5'-UTR,intron-Distal	3.20539	7.48310	HepG2	PRPF4
chr2	44064974	44065015	-	5'-UTR,CDS,intron-Distal	3.60008	7.52043	HepG2	GRWD1
chr2	44064969	44065043	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.79166	22.80908	HepG2	PPIG
chr2	44055134	44055203	-	5'-UTR,CDS,intron-Distal	3.08189	4.88392	HepG2	FASTKD2
chr2	44058873	44058914	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.83227	4.97857	HepG2	AQR
chr2	44058871	44058909	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.53393	10.09745	HepG2	PRPF8
chr2	44055226	44055319	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.37032	6.58230	HepG2	AQR
chr2	44055226	44055255	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.70132	8.19289	HepG2	PPIG
chr2	44065164	44065216	-	5'-UTR,intron-Distal,intron-Proximal	4.01687	4.21542	HepG2	SRSF1
chr2	44065705	44065776	-	5'-UTR,CDS,intron-Distal	4.22026	4.31526	HepG2	SRSF1
chr2	44065477	44065609	-	5'-UTR,intron-Distal	4.18885	4.01760	HepG2	TIAL1
chr2	44059161	44059178	-	5'-UTR,CDS,intron-Distal	3.75289	5.40651	HepG2	PPIG
chr2	44058968	44059003	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.22420	6.27819	HepG2	PPIG
chr2	44065939	44065985	-	5'-UTR,intron-Distal,intron-Proximal	3.47866	3.39008	HepG2	AQR
chr2	44055193	44055226	-	5'-UTR,CDS,intron-Distal	4.35684	8.38781	HepG2	PPIG
chr2	44055127	44055185	-	5'-UTR,CDS,intron-Distal	3.64200	8.38773	HepG2	GRWD1
chr2	44058906	44058947	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.56007	9.99012	HepG2	PPIG
chr2	44065276	44065399	-	5'-UTR,intron-Distal	3.99548	9.16368	HepG2	UCHL5
chr2	44059089	44059155	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.11281	8.97671	HepG2	PPIG
chr2	44065450	44065553	-	5'-UTR,intron-Distal	3.82148	9.60640	HepG2	PRPF4
chr2	44065641	44065678	-	5'-UTR,CDS,intron-Distal	4.00752	4.90219	HepG2	AQR
chr2	44055135	44055186	-	5'-UTR,CDS,intron-Distal	3.44347	3.39008	HepG2	AQR
chr2	44065458	44065545	-	5'-UTR,intron-Distal	3.51275	7.89512	HepG2	FASTKD2
chr2	44065779	44065833	-	5'-UTR,CDS,intron-Distal	3.81156	7.18138	HepG2	RBM15
chr2	44051357	44051382	-	CDS,intron-Distal,intron-Proximal	3.70495	10.68403	HepG2	BCLAF1
chr2	44053483	44053543	-	CDS,intron-Distal,intron-Proximal	4.68371	8.44604	HepG2	PRPF8
chr2	44058803	44058844	-	intron-Distal,intron-Proximal	4.23026	7.38067	HepG2	PRPF8
chr2	44042997	44043056	-	intron-Distal	4.26574	3.27829	HepG2	MATR3
chr2	44058044	44058113	-	intron-Distal	3.39535	3.40206	HepG2	HNRNPC
chr2	44058737	44058872	-	intron-Distal,intron-Proximal	3.13242	5.96194	HepG2	PCBP2
chr2	44049583	44049636	-	intron-Distal	3.63830	5.00859	HepG2	RBFOX2
chr2	44063683	44063732	-	intron-Distal	4.13330	10.23600	HepG2	XPO5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for ABCG5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ABCG5 is not available on ENCORE database.
60 RBPs can affect the levels of ABCG5.

The Knockdown/knockout RNA-Seq assay for ABCG5 is not available on ENCORE database.

60 RBPs can affect the gene expression of ABCG5 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ABCG5	ENSG00000138075.7	539.53480	786.70470	-0.54410	7.26730	6.37830	HepG2	ACO1
ABCG5	ENSG00000138075.7	533.01150	1111.09340	-1.05970	12.26230	11.22180	HepG2	AKAP1
ABCG5	ENSG00000138075.7	670.59300	873.42530	-0.38120	2.36070	1.64190	HepG2	CIRBP
ABCG5	ENSG00000138075.7	603.91350	365.38390	0.72480	6.08700	5.10150	HepG2	CPSF6
ABCG5	ENSG00000138075.7	769.39260	1020.85990	-0.40800	4.48200	3.69860	HepG2	CELF1
ABCG5	ENSG00000138075.7	996.77620	621.84050	0.68060	7.18790	5.62580	HepG2	DDX5
ABCG5	ENSG00000138075.7	833.61360	492.03380	0.76050	5.36200	4.02610	HepG2	DHX30
ABCG5	ENSG00000138075.7	1429.79770	752.63240	0.92570	8.05370	7.01350	HepG2	DKC1
ABCG5	ENSG00000138075.7	681.28940	510.13520	0.41730	3.66810	2.86480	HepG2	DNAJC21
ABCG5	ENSG00000138075.7	705.22170	945.72190	-0.42330	2.13080	1.52450	HepG2	EIF4B
ABCG5	ENSG00000138075.7	1556.57430	1082.92280	0.52330	8.80590	7.47140	HepG2	EIF4G1
ABCG5	ENSG00000138075.7	1369.36110	1037.36940	0.40050	3.34780	2.45710	HepG2	EIF4G2
ABCG5	ENSG00000138075.7	460.46860	768.64530	-0.73920	8.72250	7.25400	HepG2	EWSR1
ABCG5	ENSG00000138075.7	579.59750	774.20280	-0.41770	2.34300	1.63020	HepG2	FIP1L1
ABCG5	ENSG00000138075.7	807.65210	632.13740	0.35340	2.57510	1.81520	HepG2	FUBP3
ABCG5	ENSG00000138075.7	664.31210	980.05800	-0.56100	4.50580	3.63780	HepG2	FXR1
ABCG5	ENSG00000138075.7	720.69400	414.14290	0.79920	6.79690	5.82070	HepG2	GPKOW
ABCG5	ENSG00000138075.7	703.65100	515.02280	0.45010	3.31960	2.62000	HepG2	HNRNPA1
ABCG5	ENSG00000138075.7	710.74970	496.01900	0.51880	3.10350	2.34640	HepG2	HNRNPF
ABCG5	ENSG00000138075.7	601.77390	395.22860	0.60640	2.46190	1.86310	HepG2	HNRNPLL
ABCG5	ENSG00000138075.7	402.91200	534.12430	-0.40670	2.62540	1.69700	HepG2	HNRNPM
ABCG5	ENSG00000138075.7	734.09180	569.09170	0.36720	2.71300	2.11240	HepG2	HNRNPU
ABCG5	ENSG00000138075.7	780.63580	488.42630	0.67640	7.10090	5.98890	HepG2	IGF2BP1
ABCG5	ENSG00000138075.7	944.54070	719.07260	0.39340	5.06950	3.69760	HepG2	KIF1C
ABCG5	ENSG00000138075.7	538.96880	730.25490	-0.43820	2.32680	1.57000	HepG2	LARP4
ABCG5	ENSG00000138075.7	524.05070	985.87310	-0.91170	9.42060	8.31410	HepG2	MATR3
ABCG5	ENSG00000138075.7	426.36670	626.52180	-0.55530	4.67510	3.64400	HepG2	MSI2
ABCG5	ENSG00000138075.7	632.90130	403.18720	0.65040	3.39540	2.31390	HepG2	MTPAP
ABCG5	ENSG00000138075.7	753.66110	1009.08410	-0.42110	2.80880	2.17120	HepG2	NCBP2
ABCG5	ENSG00000138075.7	772.35000	1088.44450	-0.49490	5.87170	4.76290	HepG2	NOL12
ABCG5	ENSG00000138075.7	557.07620	350.48070	0.66840	4.96460	3.97300	HepG2	NSUN2
ABCG5	ENSG00000138075.7	723.41890	945.58070	-0.38640	4.11490	3.40230	HepG2	PCBP1
ABCG5	ENSG00000138075.7	1346.68230	1039.01780	0.37410	3.31320	2.66980	HepG2	PUF60
ABCG5	ENSG00000138075.7	806.00020	1102.96590	-0.45250	7.05720	6.19920	HepG2	PUM1
ABCG5	ENSG00000138075.7	904.08350	1102.15860	-0.28580	2.20580	1.60420	HepG2	PUM2
ABCG5	ENSG00000138075.7	1580.80320	1042.00720	0.60120	9.66710	8.59920	HepG2	QKI
ABCG5	ENSG00000138075.7	318.52070	628.55630	-0.98070	5.96580	4.95760	HepG2	RAVER1
ABCG5	ENSG00000138075.7	1184.05810	817.13770	0.53500	6.63450	5.37790	HepG2	RBM15
ABCG5	ENSG00000138075.7	732.38630	1206.29720	-0.71990	12.67490	11.72820	HepG2	RBM22
ABCG5	ENSG00000138075.7	355.89220	495.26950	-0.47680	3.15880	2.50850	HepG2	RPS19
ABCG5	ENSG00000138075.7	851.20960	592.31670	0.52300	3.08300	2.24020	HepG2	RPS3A
ABCG5	ENSG00000138075.7	704.81130	506.79400	0.47570	5.36960	4.52460	HepG2	SAFB2
ABCG5	ENSG00000138075.7	572.52280	878.52130	-0.61770	4.11600	3.28520	HepG2	SF3A3
ABCG5	ENSG00000138075.7	796.36200	1001.70800	-0.33100	3.14580	2.52040	HepG2	SF3B4
ABCG5	ENSG00000138075.7	478.61100	590.99500	-0.30430	2.39990	1.79510	HepG2	SMN1
ABCG5	ENSG00000138075.7	1041.19900	1362.42890	-0.38790	3.85140	3.28960	HepG2	SRFBP1
ABCG5	ENSG00000138075.7	672.93050	1045.59410	-0.63580	9.94550	9.17310	HepG2	SRSF1
ABCG5	ENSG00000138075.7	861.41510	1025.88190	-0.25210	2.15180	1.59160	HepG2	SRSF5
ABCG5	ENSG00000138075.7	1548.02990	1182.84200	0.38810	3.30040	2.75190	HepG2	SSB
ABCG5	ENSG00000138075.7	723.32530	517.05440	0.48420	2.77450	1.53610	HepG2	STAU1
ABCG5	ENSG00000138075.7	955.78890	1166.70760	-0.28770	3.07530	2.42640	HepG2	SUCLG1
ABCG5	ENSG00000138075.7	1196.88300	939.89790	0.34860	3.67570	3.04500	HepG2	TAF15
ABCG5	ENSG00000138075.7	528.90830	385.35340	0.45670	2.69130	1.97550	HepG2	TARDBP
ABCG5	ENSG00000138075.7	707.33510	552.93200	0.35520	2.70150	2.20580	HepG2	TIAL1
ABCG5	ENSG00000138075.7	515.94190	662.24180	-0.36010	2.03800	1.48960	HepG2	U2AF1
ABCG5	ENSG00000138075.7	759.60490	532.38000	0.51270	2.58820	1.61890	HepG2	UPF2
ABCG5	ENSG00000138075.7	455.35040	752.20530	-0.72410	10.02390	8.99740	HepG2	UTP3
ABCG5	ENSG00000138075.7	739.25510	530.52120	0.47860	2.58410	1.53150	HepG2	XPO5
ABCG5	ENSG00000138075.7	957.91600	572.39100	0.74280	6.76300	5.64500	HepG2	XRN2
ABCG5	ENSG00000138075.7	622.89390	856.87700	-0.46010	6.26260	5.52610	HepG2	ZNF622
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ABCG5 is not available on ENCORE database.

8 RBPs can affect the splicing of ABCG5 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ABCG5	ENSG00000138075.7	chr2	-	44051703	44051898			44051357	44051571	44052027	44052157	0.13100	0.00020	0.02384	included	HepG2	G3BP1
SE	ABCG5	ENSG00000138075.7	chr2	-	44051703	44051898			44051357	44051571	44052027	44052157	-0.24600	0.00842	0.07958	excluded	HepG2	U2AF2
SE	ABCG5	ENSG00000138075.7	chr2	-	44052027	44052157			44051357	44051571	44055121	44055254	-0.26400	0.00007	0.01013	excluded	HepG2	DDX3X
SE	ABCG5	ENSG00000138075.7	chr2	-	44051703	44051898			44051357	44051571	44052027	44052157	0.15500	0.00010	0.01066	included	HepG2	NCBP2
SE	ABCG5	ENSG00000138075.7	chr2	-	44052027	44052157			44051357	44051571	44055121	44055254	-0.35300	0.00000	0.00050	excluded	HepG2	NCBP2
SE	ABCG5	ENSG00000138075.7	chr2	-	44049935	44050074			44047053	44047239	44051051	44051257	-0.06000	0.00476	0.08533	excluded	HepG2	SRSF1
SE	ABCG5	ENSG00000138075.7	chr2	-	44052027	44052157			44051357	44051571	44055121	44055254	-0.29800	0.00120	0.03532	excluded	HepG2	SF3A3
SE	ABCG5	ENSG00000138075.7	chr2	-	44041408	44041484			44039698	44040448	44041615	44041728	0.12000	0.00001	0.00460	included	HepG2	EIF3D
A3SS	ABCG5	ENSG00000138075.7	chr2	-	44051051	44051285			44051051	44051257	44051357	44051571	0.07700	0.00015	0.01652	longer	HepG2	SF3A3
MXE	ABCG5	ENSG00000138075.7	chr2	-	44065175	44065352	44065675	44065787	44064972	44065094	44065985	44066004	-0.55000	0.00007	0.01014	2included	HepG2	RBM22

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ABCG5

General Information

Functions

Localization

Domains (AlphaFold: ABCG5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ABCG5 is not avaliable on ENCORE database.

21 proteins are bound to ABCG5 RNA:

eCLIP assay for ABCG5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ABCG5 is not available on ENCORE database.

60 RBPs can affect the gene expression of ABCG5 :

The Knockdown/knockout RNA-Seq assay for ABCG5 is not available on ENCORE database.

8 RBPs can affect the splicing of ABCG5 :

The Knockdown/knockout RNA-Seq assay for ABCG5 is not avaliable on ENCORE database.