RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|---|---|---|---|---|---|---|
MATR3 | Product_ID: ab151714 Lot_ID: GR108745-9 Source: Abcam Target Name: MATR3-human | ![]() ![]() | ![]() | ![]() ![]() | ![]() |
RBP | Chr | Start | End | Strand | log2(fold change) | -log(p-value) | Cell Line | Matched Gene | Matched Area |
---|---|---|---|---|---|---|---|---|---|
MATR3 | chr6 | 47961134 | 47961179 | - | 4.72287 | 18.04500 | HepG2 | PTCHD4 | intron-Distal |
MATR3 | chrX | 132959852 | 132959904 | - | 4.17752 | 14.35124 | HepG2 | GPC3 | intron-Distal |
MATR3 | chr1 | 91968011 | 91968071 | + | 3.27873 | 14.09652 | HepG2 | CDC7 | intron-Distal |
MATR3 | chr22 | 21924383 | 21924497 | + | 4.70725 | 13.49215 | K562 | UBE2L3 | intron-Distal |
MATR3 | chr7 | 11133406 | 11133499 | + | 4.46395 | 13.06417 | HepG2 | PHF14 | intron-Distal |
MATR3 | chr2 | 242215095 | 242215163 | - | 4.64598 | 11.87081 | HepG2 | HDLBP | intron-Distal |
MATR3 | chr2 | 242228974 | 242229049 | - | 5.51222 | 11.81112 | HepG2 | HDLBP | intron-Distal |
MATR3 | chr3 | 6562070 | 6562117 | + | 5.55771 | 10.88401 | K562 | AC069277.2 | intron-Distal |
MATR3 | chr17 | 70927202 | 70927317 | - | 4.28793 | 10.52355 | HepG2 | SLC39A11 | intron-Distal |
MATR3 | chr13 | 98823517 | 98823607 | + | 3.69246 | 10.52355 | HepG2 | FARP1 | intron-Distal |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr5 | 138614528 | 138614547 | + | intron-Distal,intron-Proximal | 4.37919 | 400.00000 | K562 | PTBP1 |
chr5 | 138614532 | 138614547 | + | intron-Distal | 4.58679 | 400.00000 | K562 | SMNDC1 |
chr5 | 138614526 | 138614535 | + | intron-Distal,intron-Proximal | 8.39415 | 400.00000 | HepG2 | DKC1 |
chr5 | 138614468 | 138614506 | + | intron-Distal,intron-Proximal | 4.40403 | 400.00000 | HepG2 | NOLC1 |
chr5 | 138614566 | 138614573 | + | intron-Distal | 8.73839 | 400.00000 | HepG2 | DKC1 |
chr5 | 138614588 | 138614603 | + | intron-Distal | 5.30954 | 400.00000 | HepG2 | DKC1 |
chr5 | 138614634 | 138614640 | + | intron-Distal | 5.13806 | 400.00000 | HepG2 | DKC1 |
chr5 | 138611931 | 138611940 | + | intron-Distal,intron-Proximal | 3.66379 | 400.00000 | K562 | SMNDC1 |
chr5 | 138612002 | 138612016 | + | intron-Distal | 5.32969 | 400.00000 | HepG2 | DKC1 |
chr5 | 138611996 | 138612002 | + | intron-Distal | 5.48304 | 400.00000 | HepG2 | DKC1 |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
MAPK8IP2 | ENSG00000008735.10 | 728.15380 | 103.38310 | 2.81610 | 50.90800 | 48.52860 | HepG2 | MATR3 | |
ST3GAL1 | ENSG00000008513.10 | 830.57120 | 2802.87070 | -1.75470 | 40.96630 | 38.77270 | HepG2 | MATR3 | |
RPS20 | ENSG00000008988.5 | 5623.49410 | 14733.68870 | -1.38960 | 32.49900 | 30.50810 | HepG2 | MATR3 | |
SLC25A5 | ENSG00000005022.5 | 4197.75980 | 10746.44290 | -1.35620 | 30.50710 | 28.58900 | HepG2 | MATR3 | |
TMEM132A | ENSG00000006118.10 | 2102.43440 | 833.07670 | 1.33540 | 23.18710 | 21.50410 | HepG2 | MATR3 | |
JHDM1D | ENSG00000006459.6 | 873.03650 | 2142.86900 | -1.29540 | 22.46710 | 20.80960 | HepG2 | MATR3 | |
SLC7A2 | ENSG00000003989.12 | 6522.01960 | 13939.55690 | -1.09580 | 20.79120 | 19.19130 | HepG2 | MATR3 | |
ZNF195 | ENSG00000005801.12 | 1073.46800 | 415.82540 | 1.36810 | 19.58870 | 18.03100 | HepG2 | MATR3 | |
SARM1 | ENSG00000004139.9 | 144.45610 | 14.01390 | 3.36560 | 19.25460 | 17.70860 | HepG2 | MATR3 | |
ELAC2 | ENSG00000006744.14 | 1804.98780 | 821.66630 | 1.13530 | 16.86290 | 15.40810 | HepG2 | MATR3 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
MATR3 | ENSG00000015479.13 | 2797.97290 | 8060.72060 | -1.52650 | 79.22590 | 77.24070 | HepG2 | TIAL1 | |
MATR3 | ENSG00000015479.13 | 3224.41300 | 13998.43190 | -2.11820 | 68.37250 | 64.77230 | K562 | MATR3 | |
MATR3 | ENSG00000015479.13 | 4877.83870 | 8473.45270 | -0.79670 | 56.10650 | 53.51310 | HepG2 | ILF2 | |
MATR3 | ENSG00000015479.13 | 2130.10260 | 10840.87180 | -2.34750 | 46.70990 | 44.39680 | HepG2 | MATR3 | |
MATR3 | ENSG00000015479.13 | 5849.29230 | 9027.28190 | -0.62600 | 35.90400 | 34.51130 | HepG2 | ZNF622 | |
MATR3 | ENSG00000015479.13 | 4672.10430 | 7370.35130 | -0.65770 | 34.30370 | 32.25870 | HepG2 | DNAJC2 | |
MATR3 | ENSG00000015479.13 | 6728.32260 | 11802.06480 | -0.81070 | 32.73030 | 31.33670 | HepG2 | RBM22 | |
MATR3 | ENSG00000015479.13 | 23476.51360 | 11748.67870 | 0.99860 | 24.84280 | 23.21990 | K562 | PUS1 | |
MATR3 | ENSG00000015479.13 | 18269.85320 | 11447.95940 | 0.67430 | 21.91160 | 20.17440 | K562 | RBM15 | |
MATR3 | ENSG00000015479.13 | 5410.06370 | 8132.53950 | -0.58810 | 21.37310 | 19.99000 | HepG2 | TRIM56 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | PIGX | ENSG00000163964.9 | chr3 | + | 196448047 | 196448227 | 196443728 | 196443792 | 196449285 | 196449427 | 0.45500 | 0.00000 | 0.00009 | included | K562 | MATR3 | |||
SE | STX2 | ENSG00000111450.9 | chr12 | - | 131288849 | 131289088 | 131285959 | 131286033 | 131291526 | 131291635 | 0.34100 | 0.00000 | 0.00119 | included | K562 | MATR3 | |||
SE | ZFAS1 | ENSG00000177410.8 | chr20 | + | 47897439 | 47897501 | 47897021 | 47897107 | 47905581 | 47905797 | 0.16700 | 0.00000 | 0.00050 | included | K562 | MATR3 | |||
SE | PKP4 | ENSG00000144283.17 | chr2 | + | 159535092 | 159535166 | 159530394 | 159530512 | 159536940 | 159537941 | 0.20000 | 0.00000 | 0.00001 | included | K562 | MATR3 | |||
SE | DIAPH1 | ENSG00000131504.11 | chr5 | - | 140967790 | 140967817 | 140966608 | 140966764 | 140998364 | 140998622 | 0.45600 | 0.00000 | 0.00000 | included | K562 | MATR3 | |||
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78913352 | 78913422 | 78908833 | 78908898 | 78915434 | 78915587 | 0.28300 | 0.00000 | 0.00000 | included | K562 | MATR3 | |||
SE | RPA3-AS1 | ENSG00000219545.5 | chr7 | + | 7715732 | 7715839 | 7712939 | 7713084 | 7841300 | 7841374 | 0.51700 | 0.00000 | 0.00000 | included | K562 | MATR3 | |||
SE | TRAPPC10 | ENSG00000160218.8 | chr21 | + | 45516485 | 45516594 | 45513954 | 45514114 | 45518237 | 45518415 | 0.25500 | 0.00000 | 0.00000 | included | K562 | MATR3 | |||
SE | ALDH5A1 | ENSG00000112294.8 | chr6 | + | 24512057 | 24512096 | 24505096 | 24505213 | 24515394 | 24515538 | 0.48000 | 0.00000 | 0.00030 | included | K562 | MATR3 | |||
SE | UQCRC2 | ENSG00000140740.6 | chr16 | + | 21970659 | 21970876 | 21969855 | 21969920 | 21973780 | 21973837 | 0.13300 | 0.00000 | 0.00000 | included | K562 | MATR3 |
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138651385 | 138651427 | 138650363 | 138650425 | 138651764 | 138651877 | -0.22500 | 0.00000 | 0.00000 | excluded | K562 | SRSF1 | |||
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138642927 | 138644016 | 138629418 | 138629494 | 138650363 | 138650425 | -0.11800 | 0.00000 | 0.00008 | excluded | K562 | SF3B4 | |||
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138651385 | 138651427 | 138650363 | 138650425 | 138651764 | 138651877 | -0.29900 | 0.00000 | 0.00000 | excluded | K562 | SF3B4 | |||
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138615623 | 138615747 | 138614739 | 138614818 | 138618427 | 138618678 | -0.34500 | 0.00000 | 0.00013 | excluded | K562 | PRPF8 | |||
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138642927 | 138644016 | 138629336 | 138629494 | 138650363 | 138650425 | -0.26300 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF1 | |||
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138651385 | 138651427 | 138650363 | 138650425 | 138651764 | 138651877 | -0.43200 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF1 | |||
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138651385 | 138651427 | 138650363 | 138650425 | 138651764 | 138651877 | -0.17300 | 0.00000 | 0.00000 | excluded | K562 | AKAP8L | |||
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138642927 | 138644016 | 138629336 | 138629494 | 138650363 | 138650425 | -0.23600 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF2 | |||
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138651385 | 138651427 | 138650363 | 138650425 | 138651764 | 138651877 | -0.54600 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF2 | |||
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138642927 | 138644016 | 138629336 | 138629494 | 138650363 | 138650540 | -0.24600 | 0.00000 | 0.00000 | excluded | K562 | AQR |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138615623 | 138615747 | 138614739 | 138614818 | 138642927 | 138643245 | 0.27100 | 0.00006 | 0.01489 | included | K562 | MATR3 | |||
RI | MATR3 | ENSG00000015479.13 | chr5 | + | 138650363 | 138651877 | 138650363 | 138650425 | 138651764 | 138651877 | 0.33100 | 0.00006 | 0.01267 | included | K562 | MATR3 | |||
SE | MATR3 | ENSG00000015479.13 | chr5 | + | 138615623 | 138615747 | 138614739 | 138614818 | 138642927 | 138643245 | 0.50200 | 0.00041 | 0.02134 | included | HepG2 | MATR3 | |||
MXE | MATR3 | ENSG00000015479.13 | chr5 | + | 138615623 | 138615747 | 138629141 | 138629281 | 138614739 | 138614818 | 138642927 | 138643245 | 0.41400 | 0.00215 | 0.05338 | 1included | HepG2 | MATR3 |