SKAP2

General Information

Gene Name : SKAP2
Gene ID : ENSG00000005020.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SKAP2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SKAP2	ENSG00000005020.12	17.60	19.76	18.68	ENCSR000AEF
HepG2	SKAP2	ENSG00000005020.12	7.49	14.21	10.85	ENCSR985KAT
K562	SKAP2	ENSG00000005020.12	9.73	7.85	8.79	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SKAP2 is not avaliable on ENCORE database.

Proteins bound to RNA

SKAP2 RNA is bound by 4 proteins.

CanvasJS.com

eCLIP assay for SKAP2 is not avaliable on ENCORE database.

4 proteins are bound to SKAP2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	26838578	26838670	-	intron-Distal	4.95114	6.79054	HepG2	PCBP2
chr7	26757800	26757917	-	intron-Distal	5.13846	6.62062	HepG2	PTBP1
chr7	26751268	26751367	-	intron-Distal	4.45255	4.85866	HepG2	QKI
chr7	26708130	26708214	-	3'-UTR,intron-Distal	4.01412	4.30417	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 4 of 4 entries

eCLIP assay for SKAP2 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for SKAP2 is not available on ENCORE database.
91 RBPs can affect the levels of SKAP2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SKAP2 is not available on ENCORE database.

91 RBPs can affect the gene expression of SKAP2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SKAP2	ENSG00000005020.8	1388.14280	630.10770	1.13940	31.20790	29.80820	HepG2	NELFE
SKAP2	ENSG00000005020.8	1260.92310	615.27960	1.03510	26.54700	25.40960	HepG2	SRSF1
SKAP2	ENSG00000005020.8	1454.54920	720.78440	1.01280	25.39960	24.15020	HepG2	RBM22
SKAP2	ENSG00000005020.8	1327.25640	508.31760	1.38450	23.92430	21.93200	HepG2	PRPF8
SKAP2	ENSG00000005020.8	373.95950	735.55980	-0.97600	19.45630	17.82190	HepG2	HNRNPL
SKAP2	ENSG00000005020.8	250.20080	601.90840	-1.26650	18.37130	16.57710	K562	SRSF1
SKAP2	ENSG00000005020.8	242.26360	553.03380	-1.19080	17.73300	16.48950	HepG2	TAF15
SKAP2	ENSG00000005020.8	1510.56250	655.98390	1.20330	17.27980	15.84040	HepG2	SUPV3L1
SKAP2	ENSG00000005020.8	998.66870	429.06340	1.21870	14.95670	13.52690	HepG2	DDX21
SKAP2	ENSG00000005020.8	1147.17510	522.78090	1.13370	14.16440	12.70830	HepG2	U2AF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 103 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SKAP2

General Information

Functions

Localization

Domains (AlphaFold: SKAP2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SKAP2 is not avaliable on ENCORE database.

4 proteins are bound to SKAP2 RNA:

eCLIP assay for SKAP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SKAP2 is not available on ENCORE database.

91 RBPs can affect the gene expression of SKAP2 :

The Knockdown/knockout RNA-Seq assay for SKAP2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of SKAP2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for SKAP2 is not avaliable on ENCORE database.