NUF2

General Information

Gene Name : NUF2
Gene ID : ENSG00000143228.12
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NUF2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NUF2	ENSG00000143228.12	46.90	41.08	43.99	ENCSR000AEF
HepG2	NUF2	ENSG00000143228.12	18.45	41.69	30.07	ENCSR985KAT
K562	NUF2	ENSG00000143228.12	39.53	40.58	40.05	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NUF2 is not avaliable on ENCORE database.

Proteins bound to RNA

NUF2 RNA is bound by 20 proteins.

CanvasJS.com

eCLIP assay for NUF2 is not avaliable on ENCORE database.

20 proteins are bound to NUF2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	163325450	163325520	+	3'-UTR	4.21999	33.24522	K562	PUM2
chr1	163313588	163313661	+	3'-UTR,CDS,intron-Proximal	4.13175	16.16743	K562	ZNF622
chr1	163315483	163315542	+	3'-UTR,CDS,intron-Distal	4.23949	16.07261	K562	UCHL5
chr1	163317557	163317665	+	CDS	3.52953	14.29660	K562	UCHL5
chr1	163309123	163309225	+	CDS,intron-Proximal	3.92270	13.48685	K562	SF3B4
chr1	163298454	163298538	+	intron-Distal,intron-Proximal	3.99567	13.47128	K562	KHSRP
chr1	163300183	163300264	+	intron-Distal	3.71661	12.40530	K562	KHSRP
chr1	163315474	163315539	+	3'-UTR,CDS,intron-Distal	3.63314	12.25516	K562	ZNF622
chr1	163317563	163317722	+	CDS	5.13273	12.14572	HepG2	BCLAF1
chr1	163297949	163298045	+	CDS,intron-Proximal	4.17626	11.97728	K562	SF3B4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 63 entries

eCLIP assay for NUF2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NUF2 is not available on ENCORE database.
162 RBPs can affect the levels of NUF2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NUF2 is not available on ENCORE database.

162 RBPs can affect the gene expression of NUF2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NUF2	ENSG00000143228.8	12.91390	679.86490	-5.71820	126.10000	123.51310	HepG2	BOP1
NUF2	ENSG00000143228.8	36.36580	506.93460	-3.80110	99.20410	97.20400	HepG2	ZNF622
NUF2	ENSG00000143228.8	159.79330	975.75560	-2.61030	97.82560	95.93120	HepG2	SRFBP1
NUF2	ENSG00000143228.8	72.59160	659.72060	-3.18400	82.98020	80.95070	HepG2	TIAL1
NUF2	ENSG00000143228.8	138.35420	863.89970	-2.64250	79.73740	77.72460	HepG2	RBM22
NUF2	ENSG00000143228.8	15.24830	445.79370	-4.86970	74.13460	71.54510	HepG2	EIF2S1
NUF2	ENSG00000143228.8	124.91330	686.29710	-2.45790	73.51520	71.21470	HepG2	CKAP4
NUF2	ENSG00000143228.8	59.55590	526.36530	-3.14370	66.88640	64.59670	HepG2	RPS19
NUF2	ENSG00000143228.8	48.21410	578.51620	-3.58480	65.71470	63.39100	HepG2	SUPV3L1
NUF2	ENSG00000143228.8	35.74840	468.70880	-3.71270	62.11960	59.48090	HepG2	IGF2BP2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 197 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NUF2 is not available on ENCORE database.

19 RBPs can affect the splicing of NUF2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	NUF2	ENSG00000143228.8	chr1	+	163292656	163292885			163291679	163291856	163295821	163295964	0.22200	0.00000	included	K562	PUS1
SE	NUF2	ENSG00000143228.8	chr1	+	163292656	163292885			163291679	163291856	163295821	163295964	0.18400	0.00009	included	K562	EFTUD2
SE	NUF2	ENSG00000143228.8	chr1	+	163307809	163307883			163306540	163306638	163309170	163309267	-0.08900	0.00000	excluded	K562	U2AF1
SE	NUF2	ENSG00000143228.8	chr1	+	163315467	163315608			163313522	163313660	163317552	163317728	-0.08500	0.00000	excluded	K562	HNRNPL
SE	NUF2	ENSG00000143228.8	chr1	+	163315467	163315608			163313522	163313660	163317552	163317720	-0.08700	0.00011	excluded	K562	U2AF2
SE	NUF2	ENSG00000143228.8	chr1	+	163307809	163307883			163306540	163306638	163309170	163309267	-0.07400	0.00003	excluded	K562	U2AF2
SE	NUF2	ENSG00000143228.8	chr1	+	163292656	163292885			163291679	163291856	163295821	163295964	-0.10700	0.00000	excluded	K562	HNRNPK
SE	NUF2	ENSG00000143228.8	chr1	+	163315467	163315608			163313522	163313660	163317552	163317720	-0.07700	0.00006	excluded	K562	HNRNPC
A3SS	NUF2	ENSG00000143228.8	chr1	+	163298612	163298697			163298635	163298697	163298017	163298094	0.10300	0.00000	longer	K562	AQR
MXE	NUF2	ENSG00000143228.8	chr1	+	163309170	163309267	163310153	163310216	163307809	163307883	163313522	163313660	0.15300	0.00000	1included	K562	DROSHA

Showing 1 to 10 of 37 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NUF2

General Information

Functions

Localization

Domains (AlphaFold: NUF2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NUF2 is not avaliable on ENCORE database.

20 proteins are bound to NUF2 RNA:

eCLIP assay for NUF2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NUF2 is not available on ENCORE database.

162 RBPs can affect the gene expression of NUF2 :

The Knockdown/knockout RNA-Seq assay for NUF2 is not available on ENCORE database.

19 RBPs can affect the splicing of NUF2 :

The Knockdown/knockout RNA-Seq assay for NUF2 is not avaliable on ENCORE database.