ARSB

General Information

Gene Name : ARSB
Gene ID : ENSG00000113273.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ARSB)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ARSB	ENSG00000113273.16	4.68	3.66	4.17	ENCSR000AEF
HepG2	ARSB	ENSG00000113273.16	21.16	31.22	26.19	ENCSR985KAT
K562	ARSB	ENSG00000113273.16	1.23	1.64	1.44	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ARSB is not avaliable on ENCORE database.

Proteins bound to RNA

ARSB RNA is bound by 25 proteins.

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eCLIP assay for ARSB is not avaliable on ENCORE database.

25 proteins are bound to ARSB RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr5	78281204	78281315	-	3'-UTR,5'-UTR,intron-Distal	3.41416	39.82226	HepG2	DDX3X
chr5	78277255	78277359	-	intron-Distal	5.56636	24.76376	HepG2	QKI
chr5	78075747	78075775	-	3'-UTR,intron-Distal	4.55964	24.04761	HepG2	LIN28B
chr5	78281063	78281130	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.97117	23.83881	HepG2	DDX3X
chr5	78075775	78075800	-	3'-UTR,intron-Distal	4.54424	23.50347	HepG2	LIN28B
chr5	78281140	78281204	-	3'-UTR,5'-UTR,intron-Distal	3.45511	22.15511	HepG2	DDX3X
chr5	78243922	78244001	-	intron-Distal	6.27661	19.23199	HepG2	PCBP2
chr5	78075120	78075184	-	3'-UTR,intron-Distal	5.15337	17.83698	HepG2	LIN28B
chr5	78280930	78280989	-	CDS,intron-Distal,intron-Proximal	3.09814	16.59244	HepG2	DDX3X
chr5	78281145	78281264	-	3'-UTR,5'-UTR,intron-Distal	3.68356	15.06615	HepG2	RPS3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 111 entries

eCLIP assay for ARSB is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ARSB is not available on ENCORE database.
122 RBPs can affect the levels of ARSB.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ARSB is not available on ENCORE database.

122 RBPs can affect the gene expression of ARSB :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ARSB	ENSG00000113273.11	1352.69090	3860.75880	-1.51310	91.80210	89.75700	HepG2	PTBP1
ARSB	ENSG00000113273.11	874.90370	2450.06330	-1.48560	85.16790	82.57510	HepG2	SAFB2
ARSB	ENSG00000113273.11	845.98750	2401.73010	-1.50540	82.13450	79.56170	HepG2	ZC3H8
ARSB	ENSG00000113273.11	1667.24770	4019.57490	-1.26960	70.89120	68.67760	HepG2	SF3B4
ARSB	ENSG00000113273.11	1721.44710	4001.73830	-1.21700	66.16050	64.00720	HepG2	RECQL
ARSB	ENSG00000113273.11	882.45990	2673.38620	-1.59910	64.97790	63.16470	HepG2	TIAL1
ARSB	ENSG00000113273.11	1906.77000	4195.55510	-1.13770	64.38170	62.78610	HepG2	SRSF1
ARSB	ENSG00000113273.11	1865.40950	4296.66620	-1.20370	64.45310	62.68200	HepG2	NELFE
ARSB	ENSG00000113273.11	5471.09870	2927.41870	0.90210	46.97130	44.86010	HepG2	UPF1
ARSB	ENSG00000113273.11	465.10200	2294.54940	-2.30260	46.36650	44.10150	HepG2	DDX21
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 127 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ARSB is not available on ENCORE database.

5 RBPs can affect the splicing of ARSB :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ARSB	ENSG00000113273.11	chr5	-	78079139	78079320			78077674	78077797	78135178	78135249	0.07900	0.00000	0.00023	included	HepG2	PCBP1
SE	ARSB	ENSG00000113273.11	chr5	-	78079139	78079320			78077674	78077797	78135178	78135249	0.12000	0.00001	0.00224	included	HepG2	TIAL1
SE	ARSB	ENSG00000113273.11	chr5	-	78079139	78079320			78077674	78077797	78135178	78135249	0.05700	0.00034	0.04205	included	HepG2	TAF15
MXE	ARSB	ENSG00000113273.11	chr5	-	78119392	78119475	78119932	78120004	78111333	78111937	78135178	78135249	0.12300	0.00061	0.03501	1included	HepG2	SRSF9
SE	ARSB	ENSG00000113273.11	chr5	-	78079139	78079320			78077674	78077797	78135178	78135249	0.07200	0.00095	0.09086	included	HepG2	SSB

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ARSB

General Information

Functions

Localization

Domains (AlphaFold: ARSB)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ARSB is not avaliable on ENCORE database.

25 proteins are bound to ARSB RNA:

eCLIP assay for ARSB is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ARSB is not available on ENCORE database.

122 RBPs can affect the gene expression of ARSB :

The Knockdown/knockout RNA-Seq assay for ARSB is not available on ENCORE database.

5 RBPs can affect the splicing of ARSB :

The Knockdown/knockout RNA-Seq assay for ARSB is not avaliable on ENCORE database.