AP2B1

General Information

Gene Name : AP2B1
Gene ID : ENSG00000006125.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AP2B1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	AP2B1	ENSG00000006125.17	62.01	56.48	59.24	ENCSR000AEF
HepG2	AP2B1	ENSG00000006125.17	41.66	54.77	48.22	ENCSR985KAT
K562	AP2B1	ENSG00000006125.17	138.31	137.22	137.76	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AP2B1 is not avaliable on ENCORE database.

Proteins bound to RNA

AP2B1 RNA is bound by 39 proteins.

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eCLIP assay for AP2B1 is not avaliable on ENCORE database.

39 proteins are bound to AP2B1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	34052690	34052764	+	3'-UTR	5.17525	44.92919	K562	UPF1
chr17	34051129	34051181	+	3'-UTR	4.91010	39.61257	K562	PUM2
chr17	34052825	34052907	+	3'-UTR	4.06782	37.83209	K562	PABPC4
chr17	34052627	34052690	+	3'-UTR	4.07974	31.41478	K562	UPF1
chr17	34052546	34052627	+	3'-UTR	4.81795	30.08852	K562	UPF1
chr17	34051309	34051375	+	3'-UTR	3.23300	30.08583	K562	UPF1
chr17	33966739	33966780	+	5'-UTR,CDS,intron-Proximal	5.94471	28.92648	K562	DGCR8
chr17	34051657	34051766	+	3'-UTR	3.64719	28.18135	K562	FAM120A
chr17	33925195	33925270	+	5'-UTR,CDS,intron-Proximal	3.81602	26.46567	K562	SF3B4
chr17	34052764	34052834	+	3'-UTR	4.85634	25.12543	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 162 entries

eCLIP assay for AP2B1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for AP2B1 is not available on ENCORE database.
95 RBPs can affect the levels of AP2B1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for AP2B1 is not available on ENCORE database.

95 RBPs can affect the gene expression of AP2B1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AP2B1	ENSG00000006125.12	1871.73560	4339.60300	-1.21320	46.07960	44.49900	HepG2	TIAL1
AP2B1	ENSG00000006125.12	2043.92420	4041.76040	-0.98360	24.03640	22.45870	HepG2	HNRNPA1
AP2B1	ENSG00000006125.12	20363.41260	13702.46460	0.57140	15.99470	14.55270	K562	RBM15
AP2B1	ENSG00000006125.12	4061.66960	5614.44040	-0.46710	13.35510	12.39700	HepG2	SSB
AP2B1	ENSG00000006125.12	26464.96800	14063.00360	0.91210	12.78920	11.66730	K562	PUS1
AP2B1	ENSG00000006125.12	6682.55970	11284.09980	-0.75580	13.39930	11.63050	K562	TARDBP
AP2B1	ENSG00000006125.12	3072.82000	5396.04340	-0.81230	12.74970	11.53800	HepG2	EIF2S1
AP2B1	ENSG00000006125.12	3411.99230	6018.64070	-0.81880	12.84830	11.47400	HepG2	MAGOH
AP2B1	ENSG00000006125.12	4403.64800	5980.16310	-0.44150	11.87310	10.78310	HepG2	SF3B4
AP2B1	ENSG00000006125.12	9645.20410	14639.98350	-0.60200	12.32500	10.70860	K562	GRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 113 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for AP2B1 is not available on ENCORE database.

20 RBPs can affect the splicing of AP2B1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	AP2B1	ENSG00000006125.12	chr17	+	33997875	33997917			33984617	33984810	33998772	33998919	0.23700	0.00000	0.00002	included	HepG2	HNRNPL
SE	AP2B1	ENSG00000006125.12	chr17	+	33997875	33997917			33984617	33984810	33998772	33998919	0.16100	0.00000	0.00003	included	K562	PTBP1
SE	AP2B1	ENSG00000006125.12	chr17	+	33928004	33928090			33925248	33925354	33932723	33932859	0.14300	0.00000	0.00000	included	K562	HNRNPC
A3SS	AP2B1	ENSG00000006125.12	chr17	+	33966595	33966779			33966613	33966779	33963359	33963475	0.06400	0.00000	0.00000	longer	K562	AQR
MXE	AP2B1	ENSG00000006125.12	chr17	+	33921026	33921086	33925248	33925354	33914332	33914447	33932723	33932859	0.23700	0.00000	0.00000	1included	K562	SUPV3L1
SE	AP2B1	ENSG00000006125.12	chr17	+	33997875	33997917			33984617	33984810	33998772	33998919	0.14100	0.00001	0.00253	included	K562	MATR3
SE	AP2B1	ENSG00000006125.12	chr17	+	33997875	33997917			33984617	33984810	33998772	33998919	0.15900	0.00001	0.00125	included	HepG2	AKAP1
SE	AP2B1	ENSG00000006125.12	chr17	+	33914582	33914616			33914332	33914447	33921026	33921086	-0.08200	0.00001	0.00017	excluded	K562	AQR
SE	AP2B1	ENSG00000006125.12	chr17	+	34034932	34035028			34009713	34009843	34036242	34036327	0.06100	0.00001	0.00178	included	HepG2	SFPQ
SE	AP2B1	ENSG00000006125.12	chr17	+	33997875	33997917			33984617	33984810	33998772	33998919	0.19200	0.00001	0.01411	included	HepG2	UPF1

Showing 1 to 10 of 23 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AP2B1

General Information

Functions

Localization

Domains (AlphaFold: AP2B1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AP2B1 is not avaliable on ENCORE database.

39 proteins are bound to AP2B1 RNA:

eCLIP assay for AP2B1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AP2B1 is not available on ENCORE database.

95 RBPs can affect the gene expression of AP2B1 :

The Knockdown/knockout RNA-Seq assay for AP2B1 is not available on ENCORE database.

20 RBPs can affect the splicing of AP2B1 :

The Knockdown/knockout RNA-Seq assay for AP2B1 is not avaliable on ENCORE database.