TRIP12

General Information

Gene Name : TRIP12
Gene ID : ENSG00000153827.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TRIP12)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TRIP12	ENSG00000153827.13	96.97	97.72	97.34	ENCSR000AEF
HepG2	TRIP12	ENSG00000153827.13	105.88	101.18	103.53	ENCSR985KAT
K562	TRIP12	ENSG00000153827.13	57.74	58.88	58.31	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TRIP12 is not avaliable on ENCORE database.

Proteins bound to RNA

TRIP12 RNA is bound by 48 proteins.

CanvasJS.com

eCLIP assay for TRIP12 is not avaliable on ENCORE database.

48 proteins are bound to TRIP12 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	230670546	230670618	-	CDS,intron-Distal,intron-Proximal	4.38594	49.70573	HepG2	U2AF2
chr2	230655876	230655939	-	CDS,intron-Distal	5.57387	31.05078	HepG2	BCLAF1
chr2	230786091	230786269	-	intron-Distal,intron-Proximal	5.24345	30.51743	HepG2	PRPF4
chr2	230723862	230723933	-	CDS,intron-Distal,intron-Proximal	5.38652	27.82740	HepG2	BCLAF1
chr2	230638848	230638960	-	CDS,intron-Distal	4.38679	26.20360	HepG2	BCLAF1
chr2	230656866	230656937	-	CDS,intron-Distal,intron-Proximal	3.76707	25.23939	HepG2	BCLAF1
chr2	230672326	230672455	-	CDS,intron-Distal,intron-Proximal	3.52005	21.60064	HepG2	PRPF8
chr2	230786597	230786667	-	5'-UTR,intron-Distal,intron-Proximal	4.49137	20.55694	K562	ZNF622
chr2	230786353	230786419	-	5'-UTR,intron-Distal,intron-Proximal	4.34603	20.35162	HepG2	CSTF2T
chr2	230723997	230724077	-	CDS,intron-Distal,intron-Proximal	4.28030	20.29031	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 327 entries

eCLIP assay for TRIP12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TRIP12 is not available on ENCORE database.
74 RBPs can affect the levels of TRIP12.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TRIP12 is not available on ENCORE database.

74 RBPs can affect the gene expression of TRIP12 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TRIP12	ENSG00000153827.9	9818.05170	5671.58380	0.79160	43.78780	42.40210	HepG2	SRSF1
TRIP12	ENSG00000153827.9	7581.30640	4614.19170	0.71630	33.24680	31.74280	HepG2	SRSF9
TRIP12	ENSG00000153827.9	12726.00720	8643.23860	0.55800	24.77010	23.66150	HepG2	SRFBP1
TRIP12	ENSG00000153827.9	7794.83390	5219.11810	0.57860	19.65350	18.44460	HepG2	PTBP1
TRIP12	ENSG00000153827.9	8825.62030	5129.84640	0.78270	19.49150	17.80710	HepG2	RBM25
TRIP12	ENSG00000153827.9	3600.14040	4824.03170	-0.42220	16.30150	14.69690	K562	NSUN2
TRIP12	ENSG00000153827.9	4539.45880	6127.34520	-0.43270	15.61050	14.12710	HepG2	HNRNPL
TRIP12	ENSG00000153827.9	7646.48800	5433.61580	0.49280	15.19970	13.98090	HepG2	SF3B4
TRIP12	ENSG00000153827.9	3783.15220	6218.13260	-0.71690	15.47970	13.65500	K562	GRSF1
TRIP12	ENSG00000153827.9	3791.04470	5137.21620	-0.43840	11.19740	10.17530	HepG2	TRIM56
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 84 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TRIP12 is not available on ENCORE database.

18 RBPs can affect the splicing of TRIP12 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	TRIP12	ENSG00000153827.9	chr2	-	230725121	230725247	230723487	230724290	230744697	230744844	-0.26000	0.00000	excluded	HepG2	U2AF1
SE	TRIP12	ENSG00000153827.9	chr2	-	230725121	230725247	230724202	230724290	230744697	230744844	-0.22800	0.00017	excluded	K562	AKAP8L
SE	TRIP12	ENSG00000153827.9	chr2	-	230663998	230664099	230663590	230663765	230666967	230667175	-0.05300	0.00002	excluded	HepG2	U2AF2
SE	TRIP12	ENSG00000153827.9	chr2	-	230725121	230725247	230723487	230724290	230744697	230744844	-0.40500	0.00000	excluded	HepG2	U2AF2
SE	TRIP12	ENSG00000153827.9	chr2	-	230650472	230650571	230643591	230643706	230654326	230654478	-0.15200	0.00005	excluded	K562	AQR
SE	TRIP12	ENSG00000153827.9	chr2	-	230725121	230725247	230723487	230724290	230744697	230744844	-0.33700	0.00000	excluded	K562	PUS1
SE	TRIP12	ENSG00000153827.9	chr2	-	230725121	230725247	230723487	230724290	230744697	230744844	-0.30000	0.00000	excluded	K562	U2AF1
SE	TRIP12	ENSG00000153827.9	chr2	-	230725121	230725247	230723487	230724290	230744697	230744844	-0.24100	0.00002	excluded	K562	HNRNPUL1
SE	TRIP12	ENSG00000153827.9	chr2	-	230725121	230725247	230723487	230724290	230744697	230744844	-0.32500	0.00000	excluded	K562	U2AF2
SE	TRIP12	ENSG00000153827.9	chr2	-	230725121	230725247	230724202	230724290	230744697	230744844	-0.23700	0.00002	excluded	K562	RBM15

Showing 1 to 10 of 34 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TRIP12

General Information

Functions

Localization

Domains (AlphaFold: TRIP12)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TRIP12 is not avaliable on ENCORE database.

48 proteins are bound to TRIP12 RNA:

eCLIP assay for TRIP12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TRIP12 is not available on ENCORE database.

74 RBPs can affect the gene expression of TRIP12 :

The Knockdown/knockout RNA-Seq assay for TRIP12 is not available on ENCORE database.

18 RBPs can affect the splicing of TRIP12 :

The Knockdown/knockout RNA-Seq assay for TRIP12 is not avaliable on ENCORE database.