ZNF271

General Information

Gene Name       : ZNF271
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF271)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF271 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF271 RNA is bound by 2 proteins.  







eCLIP assay for ZNF271 is not avaliable on ENCORE database.





2 proteins are bound to ZNF271 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr183287899932879098+intron-Distal3.233594.30679K562KHSRP
chr183287035932870431+intron-Proximal5.9161112.10660K562AQR
chr183287035532870359+intron-Proximal5.501078.88118K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF271 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF271 is not available on ENCORE database.

  • 74 RBPs can affect the levels of ZNF271.  








The Knockdown/knockout RNA-Seq assay for ZNF271 is not available on ENCORE database.





74 RBPs can affect the gene expression of ZNF271 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF271ENSG00000257267.1671.64120465.389100.529206.189405.35330HepG2ACO1
ZNF271ENSG00000257267.1368.65910467.61100-0.343002.238301.54070HepG2AKAP8L
ZNF271ENSG00000257267.1347.32710466.30580-0.425002.232701.60660HepG2CPSF6
ZNF271ENSG00000257267.1397.66180287.363300.468602.982601.86810HepG2CSTF2
ZNF271ENSG00000257267.1592.18770445.262200.411303.371002.63320HepG2DKC1
ZNF271ENSG00000257267.1317.05760421.11090-0.409503.143302.45550HepG2DNAJC2
ZNF271ENSG00000257267.1512.03410369.799800.469403.214602.05840HepG2EIF3G
ZNF271ENSG00000257267.11314.08890740.311100.8278018.5260017.20030HepG2ETF1
ZNF271ENSG00000257267.1248.55080379.37440-0.610103.972003.03820HepG2FUBP3
ZNF271ENSG00000257267.1648.95760428.906900.597402.985902.31770HepG2HNRNPA1
ZNF271ENSG00000257267.1362.19040473.93330-0.387902.760802.15380HepG2HNRNPU
ZNF271ENSG00000257267.1321.90370425.45040-0.402402.972201.92010HepG2KIF1C
ZNF271ENSG00000257267.11370.07240778.248100.815907.802106.39620HepG2LARP4
ZNF271ENSG00000257267.1633.30630449.904600.493204.023303.05370HepG2MSI2
ZNF271ENSG00000257267.1506.30780675.07820-0.415003.263602.43820HepG2NOL12
ZNF271ENSG00000257267.1495.69670383.044700.371802.672401.91030HepG2PRPF4
ZNF271ENSG00000257267.1664.72650460.976400.528002.641201.44590HepG2PRPF6
ZNF271ENSG00000257267.1410.30870604.01630-0.557905.781805.04960HepG2PTBP1
ZNF271ENSG00000257267.1388.22300644.43900-0.731207.114306.21430HepG2PUF60
ZNF271ENSG00000257267.1326.93880474.03520-0.536004.911204.13270HepG2PUS1
ZNF271ENSG00000257267.1515.99180654.25480-0.342502.494501.89590HepG2QKI
ZNF271ENSG00000257267.1818.78910618.761600.404003.466002.90430HepG2RBM22
ZNF271ENSG00000257267.1428.87150593.74420-0.469303.603902.84140HepG2RBM25
ZNF271ENSG00000257267.1875.12150594.080600.558705.265204.36340HepG2RPLP0
ZNF271ENSG00000257267.1677.13370479.055000.499103.821502.88530HepG2RPS2
ZNF271ENSG00000257267.1304.85910422.05350-0.469303.576602.86030HepG2SAFB2
ZNF271ENSG00000257267.1252.44920431.60920-0.773704.867203.56170HepG2SMNDC1
ZNF271ENSG00000257267.11031.22070698.865800.561208.941108.18160HepG2SRFBP1
ZNF271ENSG00000257267.1963.07870656.440900.552907.162606.48520HepG2SRSF1
ZNF271ENSG00000257267.11008.46430606.776300.7328013.7610012.79230HepG2SSB
ZNF271ENSG00000257267.1361.51230527.38460-0.544803.215601.84070HepG2SSRP1
ZNF271ENSG00000257267.1868.82530723.643600.263702.509601.91200HepG2SUCLG1
ZNF271ENSG00000257267.1660.19860455.229800.536203.794903.02150HepG2SUPV3L1
ZNF271ENSG00000257267.1364.15480460.48260-0.338601.939201.50490HepG2TIAL1
ZNF271ENSG00000257267.1380.90920464.63350-0.286601.802201.32750HepG2TRIM56
ZNF271ENSG00000257267.1607.80390475.461400.354201.996401.45340HepG2U2AF1
ZNF271ENSG00000257267.1682.11520524.643500.378602.983602.36590HepG2UTP3
ZNF271ENSG00000257267.1657.00930465.377000.497402.564601.54810HepG2XRCC6
ZNF271ENSG00000257267.1842.13320597.649600.494606.961606.19660HepG2ZNF622
ZNF271ENSG00000257267.1423.40320710.09470-0.746004.443403.75440K562AGGF1
ZNF271ENSG00000257267.1565.21550780.16180-0.465002.552601.61510K562AKAP8
ZNF271ENSG00000257267.1351.95570738.85500-1.069906.006205.01940K562AKAP8L
ZNF271ENSG00000257267.12105.678501128.006900.9004014.4720013.09790K562DDX47
ZNF271ENSG00000257267.1512.31750795.25370-0.634402.899702.00140K562DKC1
ZNF271ENSG00000257267.1810.292801091.48280-0.429804.941104.01960K562EIF2S2
ZNF271ENSG00000257267.1505.80950309.238700.709803.354502.23810K562EIF3A
ZNF271ENSG00000257267.1581.73860397.996700.547504.276403.25640K562EIF4A3
ZNF271ENSG00000257267.1955.56740413.900001.2070022.8033021.18470K562FXR1
ZNF271ENSG00000257267.1660.45500488.436700.435202.259901.62910K562G3BP2
ZNF271ENSG00000257267.1466.66790748.27140-0.681202.765601.54700K562HNRNPA2B1
ZNF271ENSG00000257267.1691.06760508.729500.441802.485601.91620K562HNRNPC
ZNF271ENSG00000257267.11230.31150851.858500.530204.254803.08450K562HNRNPM
ZNF271ENSG00000257267.1524.28510729.32690-0.476204.560103.40780K562HNRNPU
ZNF271ENSG00000257267.1376.66190578.92580-0.620103.929702.61820K562IGF2BP2
ZNF271ENSG00000257267.1429.02560588.83240-0.456803.318801.98030K562IGF2BP3
ZNF271ENSG00000257267.1489.71570784.21760-0.679303.953402.94480K562KIF1C
ZNF271ENSG00000257267.1829.11620608.394900.446503.848902.84960K562MAGOH
ZNF271ENSG00000257267.1509.29990750.60180-0.559502.676901.62240K562MAK16
ZNF271ENSG00000257267.1805.63880607.155600.408003.403402.36530K562MATR3
ZNF271ENSG00000257267.1641.26400878.50670-0.454102.201001.40610K562MBNL1
ZNF271ENSG00000257267.1379.28080615.76010-0.699103.733202.66980K562NAA15
ZNF271ENSG00000257267.1748.63880907.79320-0.278102.858702.10150K562NSUN2
ZNF271ENSG00000257267.1239.89680654.76650-1.448609.618807.38100K562PABPN1
ZNF271ENSG00000257267.1892.817301175.69440-0.397103.199202.30660K562PPIG
ZNF271ENSG00000257267.1401.01650778.68140-0.957404.437502.42450K562PPP1R8
ZNF271ENSG00000257267.11956.261201627.581300.265302.728501.67000K562PUM1
ZNF271ENSG00000257267.1237.78090732.96130-1.6241011.1305010.09090K562PUS1
ZNF271ENSG00000257267.1419.05460713.97820-0.768704.198803.48450K562RBM15
ZNF271ENSG00000257267.1787.96180596.441600.401602.688401.61290K562NELFE
ZNF271ENSG00000257267.11014.73240597.772300.763307.478406.12200K562RPS19
ZNF271ENSG00000257267.1636.48590394.941000.688405.043903.63430K562RPS3
ZNF271ENSG00000257267.1726.23570559.843500.375302.507701.47770K562SAFB
ZNF271ENSG00000257267.1839.02980578.820000.535504.531902.65890K562SDAD1
ZNF271ENSG00000257267.1308.58100687.62960-1.156006.113604.05460K562SNRNP200
ZNF271ENSG00000257267.1754.20340579.475100.380102.818102.10580K562SRSF1
ZNF271ENSG00000257267.1944.89820630.226400.584206.921505.60920K562SYNCRIP
ZNF271ENSG00000257267.1304.77420517.92840-0.765005.714903.34490K562TFIP11
ZNF271ENSG00000257267.11130.65790962.551400.232101.991901.37550K562UPF1
ZNF271ENSG00000257267.1467.70310742.92400-0.667602.915301.58010K562UTP18
ZNF271ENSG00000257267.11018.05200856.464400.249202.336001.55340K562WDR43
ZNF271ENSG00000257267.1893.54620521.534200.776704.184702.14380K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF271 is not available on ENCORE database.





7 RBPs can affect the splicing of ZNF271 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF271ENSG00000257267.1chr18+3287097332871196328702453287035532885939328907300.108000.000650.01433includedHepG2U2AF1
SEZNF271ENSG00000257267.1chr18+3287097332871196328702453287035532885939328907300.210000.000610.01789includedHepG2HNRNPK
SEZNF271ENSG00000257267.1chr18+3287097332871196328702453287035532885939328907300.229000.000000.00041includedHepG2MATR3
SEZNF271ENSG00000257267.1chr18+3287097332871196328702453287035532885939328907300.185000.000800.06349includedHepG2DDX6
SEZNF271ENSG00000257267.1chr18+3287097332871196328702453287035532885939328907300.146000.000010.00235includedHepG2LARP4
SEZNF271ENSG00000257267.1chr18+3287097332871196328702453287035532885939328907300.146000.005440.09394includedHepG2SRSF1
SEZNF271ENSG00000257267.1chr18+3287097332871196328702453287035532885939328907300.115000.001500.03812includedK562AGGF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF271 is not avaliable on ENCORE database.