ZFYVE21

General Information

Gene Name       : ZFYVE21
Gene ID             : ENSG00000100711.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZFYVE21)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZFYVE21ENSG00000100711.134.966.225.59ENCSR000AEF
HepG2ZFYVE21ENSG00000100711.1338.0723.9731.02ENCSR985KAT
K562ZFYVE21ENSG00000100711.1310.418.039.22ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZFYVE21 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZFYVE21 RNA is bound by 18 proteins.  







eCLIP assay for ZFYVE21 is not avaliable on ENCORE database.





18 proteins are bound to ZFYVE21 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr14104195259104195321+3'-UTR,CDS,intron-Distal,intron-Proximal4.223454.08604HepG2PPIG
chr14104199896104199976+3'-UTR4.655356.49450K562PUM2
chr14104195501104195580+3'-UTR,CDS,intron-Proximal5.161036.69228HepG2PRPF8
chr14104194056104194129+3'-UTR,CDS,intron-Distal,intron-Proximal4.860594.65563K562AQR
chr14104194241104194295+3'-UTR,CDS,intron-Distal,intron-Proximal3.022744.79866HepG2PRPF8
chr14104182126104182265+5'-UTR,CDS3.790369.39478HepG2DDX3X
chr14104182170104182272+5'-UTR,CDS4.424635.07098K562DDX3X
chr14104199011104199099+CDS3.373643.47879HepG2PPIG
chr14104193173104193228+CDS,intron-Distal,intron-Proximal4.193513.25089HepG2AQR
chr14104198919104198966+CDS,intron-Proximal4.408236.59856K562SF3B4
chr14104184496104184561+intron-Distal4.152233.40352HepG2HNRNPUL1
chr14104187573104187630+intron-Distal4.194064.08332K562NONO
chr14104190412104190476+intron-Distal4.522203.58113K562EWSR1
chr14104191691104191763+intron-Distal4.014083.19526HepG2CSTF2T
chr14104182600104182703+intron-Distal5.030219.04913K562DROSHA
chr14104195702104195820+intron-Distal3.638553.24603K562KHSRP
chr14104191620104191658+intron-Distal3.760703.30664K562NONO
chr14104187939104188043+intron-Distal4.264933.82910K562NONO
chr14104191590104191645+intron-Distal3.159043.41462K562EWSR1
chr14104183035104183140+intron-Distal3.012823.01436K562CSTF2T
chr14104190385104190484+intron-Distal3.649363.23171K562FUS
chr14104198851104198957+intron-Distal,intron-Proximal4.626979.24007HepG2SF3A3
chr14104184496104184552+intron-Distal4.329454.58989K562NONO
chr14104182602104182684+intron-Distal4.806066.19429HepG2CSTF2T
chr14104182611104182707+intron-Distal4.728143.80483K562DDX52
chr14104184468104184547+intron-Distal3.911594.18190K562FUS
chr14104190422104190487+intron-Distal4.252164.96496K562NONO
chr14104187668104187732+intron-Distal4.325585.09405K562NONO
chr14104182769104182827+intron-Distal4.470153.41584HepG2FAM120A
chr14104183063104183151+intron-Distal4.614176.40241K562NONO
chr14104191289104191358+intron-Distal3.355034.34865K562NONO
chr14104191087104191141+intron-Distal4.221464.84226K562NONO
chr14104182740104182874+intron-Distal3.327047.81475HepG2CSTF2T
chr14104184496104184582+intron-Distal3.568563.50045HepG2SFPQ
chr14104191283104191332+intron-Distal3.330884.21158HepG2CSTF2T
chr14104198791104198856+intron-Distal5.506439.16825K562SF3B4
chr14104182623104182694+intron-Distal3.501063.93915K562EWSR1
chr14104182779104182849+intron-Distal3.152223.01293HepG2NKRF
chr14104184485104184562+intron-Distal4.441525.18111K562CSTF2T
chr14104198872104198919+intron-Proximal5.496536.40247K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZFYVE21 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZFYVE21 is not available on ENCORE database.

  • 72 RBPs can affect the levels of ZFYVE21.  








The Knockdown/knockout RNA-Seq assay for ZFYVE21 is not available on ENCORE database.





72 RBPs can affect the gene expression of ZFYVE21 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZFYVE21ENSG00000100711.9524.06380345.959600.599003.228902.21680HepG2BCCIP
ZFYVE21ENSG00000100711.9262.73030353.30110-0.427302.045501.52520HepG2BOP1
ZFYVE21ENSG00000100711.9405.16170303.336200.417501.966901.30930HepG2CIRBP
ZFYVE21ENSG00000100711.9464.45540374.977100.308602.030201.44790HepG2CKAP4
ZFYVE21ENSG00000100711.9587.46130485.040800.276301.897701.34650HepG2CELF1
ZFYVE21ENSG00000100711.9413.22880258.295300.677804.956804.07610HepG2DDX21
ZFYVE21ENSG00000100711.9513.38240328.458400.644203.360602.60590HepG2EIF4B
ZFYVE21ENSG00000100711.9386.84050514.52180-0.411502.896002.04320HepG2EIF4G1
ZFYVE21ENSG00000100711.9311.33790492.86990-0.662704.844003.78470HepG2EIF4G2
ZFYVE21ENSG00000100711.9973.39280668.143100.542807.049806.16490HepG2ETF1
ZFYVE21ENSG00000100711.9485.50720366.503100.405602.477601.68660HepG2EWSR1
ZFYVE21ENSG00000100711.9119.11640197.62360-0.730403.743902.36570HepG2FAM120A
ZFYVE21ENSG00000100711.9590.52330340.424600.794606.702805.65490HepG2FXR1
ZFYVE21ENSG00000100711.9427.87620315.715200.438502.118201.53320HepG2G3BP1
ZFYVE21ENSG00000100711.9367.55850248.760400.563103.145402.46290HepG2HNRNPA1
ZFYVE21ENSG00000100711.9362.37990479.28260-0.403402.661901.74300HepG2HNRNPA2B1
ZFYVE21ENSG00000100711.9384.82950276.705900.475802.447401.79190HepG2HNRNPC
ZFYVE21ENSG00000100711.9518.94350319.873600.698005.208804.27390HepG2HNRNPK
ZFYVE21ENSG00000100711.9309.87700475.00970-0.616305.908804.95560HepG2HNRNPL
ZFYVE21ENSG00000100711.9397.61790274.876100.532504.205303.47130HepG2HNRNPU
ZFYVE21ENSG00000100711.9294.78800415.41220-0.494902.927602.18450HepG2IGF2BP1
ZFYVE21ENSG00000100711.9448.73820320.889700.483702.569401.91650HepG2IGF2BP2
ZFYVE21ENSG00000100711.9622.83270340.544100.870907.782106.69640HepG2MAGOH
ZFYVE21ENSG00000100711.9653.07280350.472100.897808.125307.06640HepG2NCBP2
ZFYVE21ENSG00000100711.9455.63480312.027600.546103.152902.38390HepG2PABPC4
ZFYVE21ENSG00000100711.9450.76130330.464400.447803.148002.57180HepG2PTBP1
ZFYVE21ENSG00000100711.9454.17160357.907300.343601.858601.33150HepG2QKI
ZFYVE21ENSG00000100711.9299.83040431.14980-0.524003.439802.49250HepG2RBM15
ZFYVE21ENSG00000100711.9527.55740367.777600.520404.136903.49870HepG2NELFE
ZFYVE21ENSG00000100711.9251.03250454.36390-0.856007.005305.99300HepG2RPLP0
ZFYVE21ENSG00000100711.9426.94010296.354400.526602.704901.91230HepG2RPS2
ZFYVE21ENSG00000100711.9978.21490405.953701.2687014.9645013.32360HepG2SF3A3
ZFYVE21ENSG00000100711.9476.00440344.061300.468203.434402.78450HepG2SF3B4
ZFYVE21ENSG00000100711.9408.88340285.455700.518304.188803.42670HepG2SMN1
ZFYVE21ENSG00000100711.9447.49010630.72560-0.495204.905204.29190HepG2SRFBP1
ZFYVE21ENSG00000100711.9323.26560414.44090-0.358401.968001.37010HepG2SRSF7
ZFYVE21ENSG00000100711.9406.90560252.832600.686404.135602.76710HepG2STIP1
ZFYVE21ENSG00000100711.9195.00700283.39310-0.539302.649201.72700HepG2SUPT6H
ZFYVE21ENSG00000100711.9380.35220267.071100.510003.326502.78680HepG2TIAL1
ZFYVE21ENSG00000100711.9392.82730269.482600.543604.232003.56360HepG2TRIM56
ZFYVE21ENSG00000100711.9456.32430347.584700.392602.582902.00130HepG2UTP3
ZFYVE21ENSG00000100711.9466.60760333.325600.485202.379201.70210HepG2XRN2
ZFYVE21ENSG00000100711.9613.32160395.952200.631208.267707.45330HepG2ZNF622
ZFYVE21ENSG00000100711.9767.40830419.488600.8713014.3274013.13940K562AGGF1
ZFYVE21ENSG00000100711.9721.23390460.971900.645705.352203.87850K562AKAP8
ZFYVE21ENSG00000100711.9897.01630436.501201.0390015.9214014.12540K562AKAP8L
ZFYVE21ENSG00000100711.9694.73420458.002900.601006.917605.38010K562ATP5C1
ZFYVE21ENSG00000100711.9421.20520570.75560-0.438303.852003.10160K562DDX47
ZFYVE21ENSG00000100711.9311.94350425.14770-0.446703.154802.39370K562EIF2S2
ZFYVE21ENSG00000100711.9149.84700251.18380-0.745303.772601.73480K562FAM120A
ZFYVE21ENSG00000100711.9379.81960254.038300.580203.178601.61670K562G3BP1
ZFYVE21ENSG00000100711.9184.62390295.09990-0.676603.856303.16620K562HNRNPC
ZFYVE21ENSG00000100711.9305.40890430.05390-0.493802.762301.96770K562HSPD1
ZFYVE21ENSG00000100711.9398.10000265.791300.582703.057101.95930K562IGF2BP2
ZFYVE21ENSG00000100711.9807.90660463.222000.8024010.457708.57020K562KIF1C
ZFYVE21ENSG00000100711.9389.52710279.250600.480102.943802.07700K562MAGOH
ZFYVE21ENSG00000100711.9587.80480443.429500.406502.570201.54730K562MAK16
ZFYVE21ENSG00000100711.9810.63990518.927700.643407.352405.73010K562MBNL1
ZFYVE21ENSG00000100711.9594.15710363.732000.707904.625203.39140K562NAA15
ZFYVE21ENSG00000100711.9588.32200309.763700.925304.418203.08970K562PABPN1
ZFYVE21ENSG00000100711.9366.61120248.448300.561203.332302.25850K562PCBP2
ZFYVE21ENSG00000100711.9272.75250428.74930-0.652503.937902.94570K562PCBP3
ZFYVE21ENSG00000100711.9205.71660328.87470-0.676904.679603.63720K562POLR2G
ZFYVE21ENSG00000100711.9828.35520432.859100.9363011.2882010.24010K562PUS1
ZFYVE21ENSG00000100711.9762.47090421.781100.8541012.5353011.27710K562RBM15
ZFYVE21ENSG00000100711.9388.09850260.112800.577203.794602.79900K562RBM22
ZFYVE21ENSG00000100711.9197.66200279.64470-0.500602.113201.40340K562RPS19
ZFYVE21ENSG00000100711.9202.74030302.85480-0.579002.518301.56930K562RPS3
ZFYVE21ENSG00000100711.9201.83140293.00590-0.537802.668201.60770K562SAFB
ZFYVE21ENSG00000100711.9514.04510283.307200.859403.436802.05860K562SF1
ZFYVE21ENSG00000100711.9358.32700216.393100.727505.762804.49950K562SF3B4
ZFYVE21ENSG00000100711.9121.32190199.61650-0.718403.152601.44430K562SND1
ZFYVE21ENSG00000100711.9594.15010325.329300.868803.727402.22090K562SNRNP200
ZFYVE21ENSG00000100711.9575.06730456.631700.332602.443501.55790K562SRPK2
ZFYVE21ENSG00000100711.9244.97850329.85700-0.429202.271601.52640K562SYNCRIP
ZFYVE21ENSG00000100711.9427.63580269.178100.667704.772303.83480K562TARDBP
ZFYVE21ENSG00000100711.9304.11480201.700200.592302.863001.74940K562U2AF1
ZFYVE21ENSG00000100711.9296.57470208.353800.509302.829402.01680K562U2AF2
ZFYVE21ENSG00000100711.9574.68900769.22000-0.420602.630801.37720K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZFYVE21 is not available on ENCORE database.





5 RBPs can affect the splicing of ZFYVE21 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZFYVE21ENSG00000100711.9chr14+104196129104196183104195427104195519104198956104199099-0.176000.010670.09609excludedHepG2U2AF2
SEZFYVE21ENSG00000100711.9chr14+1041961291041961831041954271041955191041989561041990990.247000.001410.06655includedHepG2PTBP1
SEZFYVE21ENSG00000100711.9chr14+1041961291041961831041954271041955191041989561041990990.186000.001890.06360includedHepG2HNRNPC
A5SSZFYVE21ENSG00000100711.9chr14+1041954911041957041041954911041955191041989561041990990.211000.000040.00257longerK562PUS1
A5SSZFYVE21ENSG00000100711.9chr14+1041954911041957041041954911041955191041989561041990990.104000.002170.03622longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZFYVE21 is not avaliable on ENCORE database.