TNFRSF8

General Information

Gene Name       : TNFRSF8
Gene ID             : ENSG00000120949.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TNFRSF8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TNFRSF8ENSG00000120949.147.8233.7820.80ENCSR000AEF
HepG2TNFRSF8ENSG00000120949.140.000.000.00ENCSR985KAT
K562TNFRSF8ENSG00000120949.1417.6415.0716.36ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TNFRSF8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TNFRSF8 RNA is bound by 4 proteins.  







eCLIP assay for TNFRSF8 is not avaliable on ENCORE database.





4 proteins are bound to TNFRSF8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11215067412150740+intron-Distal5.7711422.33763K562AGGF1
chr11218645412186596+intron-Distal4.761694.39969K562TARDBP
chr11214724312147281+intron-Distal3.826154.47419K562AGGF1
chr11215059812150629+intron-Distal5.1186415.94588K562AGGF1
chr11218647512186560+intron-Distal4.156595.99968K562PRPF8
chr11215065712150773+intron-Distal4.089613.69238K562GTF2F1
chr11215037012150462+intron-Distal6.3336817.85441K562AGGF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TNFRSF8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TNFRSF8 is not available on ENCORE database.

  • 60 RBPs can affect the levels of TNFRSF8.  








The Knockdown/knockout RNA-Seq assay for TNFRSF8 is not available on ENCORE database.





60 RBPs can affect the gene expression of TNFRSF8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TNFRSF8ENSG00000120949.10596.70000823.14690-0.464103.481602.09480K562ABCF1
TNFRSF8ENSG00000120949.10509.48540792.53600-0.637403.708502.53220K562AKAP8
TNFRSF8ENSG00000120949.10402.98300750.52940-0.8972011.164309.73280K562AKAP8L
TNFRSF8ENSG00000120949.10395.34300747.56470-0.919103.161802.54230K562AQR
TNFRSF8ENSG00000120949.10571.39560787.45660-0.462703.425802.40000K562ATP5C1
TNFRSF8ENSG00000120949.10184.02620394.68170-1.100809.436307.77580K562BOP1
TNFRSF8ENSG00000120949.10959.446701247.41940-0.378703.315602.24780K562CELF1
TNFRSF8ENSG00000120949.10582.71060846.28060-0.538404.861302.88840K562DDX19B
TNFRSF8ENSG00000120949.10670.04680858.41410-0.357403.500502.77970K562DDX47
TNFRSF8ENSG00000120949.101075.55530823.876300.384503.896603.06480K562EIF2S2
TNFRSF8ENSG00000120949.10233.25570149.597500.640703.330802.46230K562EIF3G
TNFRSF8ENSG00000120949.10452.75930310.543400.543802.723901.58370K562EIF4B
TNFRSF8ENSG00000120949.10317.11460591.70920-0.899909.565507.88430K562FIP1L1
TNFRSF8ENSG00000120949.10206.11790451.90840-1.1326010.657708.27740K562FKBP4
TNFRSF8ENSG00000120949.10221.25800427.01510-0.948608.274206.74790K562FMR1
TNFRSF8ENSG00000120949.10218.67000361.95320-0.727004.633503.42040K562FTO
TNFRSF8ENSG00000120949.1075.33910132.25710-0.811903.529701.99100K562FUS
TNFRSF8ENSG00000120949.10644.22370358.621800.8450011.3325010.19540K562FXR1
TNFRSF8ENSG00000120949.1019.3808096.16160-2.310809.700508.22040K562G3BP2
TNFRSF8ENSG00000120949.10644.16860442.055300.543103.505001.87330K562GEMIN5
TNFRSF8ENSG00000120949.10269.46950400.63160-0.572203.175202.32690K562GPKOW
TNFRSF8ENSG00000120949.101416.364801097.850700.367403.189702.38050K562GRSF1
TNFRSF8ENSG00000120949.10268.12370496.12640-0.887803.851102.33050K562HNRNPA2B1
TNFRSF8ENSG00000120949.10215.81970520.18670-1.2692015.8526014.50570K562HNRNPC
TNFRSF8ENSG00000120949.101271.02590802.229800.663807.668706.36250K562HSPD1
TNFRSF8ENSG00000120949.10376.52890666.49720-0.823804.597902.72800K562ILF2
TNFRSF8ENSG00000120949.10265.20280471.64970-0.830606.781504.47070K562ILF3
TNFRSF8ENSG00000120949.10438.27180796.55370-0.861905.236604.02860K562KIF1C
TNFRSF8ENSG00000120949.10185.70810342.13770-0.881503.407602.35900K562KRR1
TNFRSF8ENSG00000120949.10620.98990231.928701.4208023.6511020.97490K562MAGOH
TNFRSF8ENSG00000120949.10390.21950231.421300.753706.247104.77930K562MATR3
TNFRSF8ENSG00000120949.10691.075101081.51550-0.646106.779405.03960K562MSI2
TNFRSF8ENSG00000120949.10310.78570625.45660-1.009008.401506.53320K562NAA15
TNFRSF8ENSG00000120949.10319.28960807.23930-1.338109.353807.83290K562PCBP3
TNFRSF8ENSG00000120949.101295.386101042.553300.313202.790001.34330K562PNPT1
TNFRSF8ENSG00000120949.10310.31780619.13220-0.996506.313805.10820K562POLR2G
TNFRSF8ENSG00000120949.10599.34120225.351301.4111016.9407015.35900K562PTBP1
TNFRSF8ENSG00000120949.10336.35500744.43040-1.1462014.6105013.40120K562PUS1
TNFRSF8ENSG00000120949.1040.0023091.73270-1.197402.904301.44780K562RAVER1
TNFRSF8ENSG00000120949.10430.82320725.24310-0.751409.593908.51310K562RBM15
TNFRSF8ENSG00000120949.10924.47430551.812100.744409.089207.18850K562SAFB
TNFRSF8ENSG00000120949.10233.05160381.08190-0.709504.041202.85140K562SF3B1
TNFRSF8ENSG00000120949.10163.9319099.913500.714203.169302.25340K562SF3B4
TNFRSF8ENSG00000120949.10279.90230455.89800-0.703802.508501.36020K562SNRNP200
TNFRSF8ENSG00000120949.10393.18710220.946700.831406.864405.76010K562SRSF1
TNFRSF8ENSG00000120949.10529.71230776.35760-0.551504.510702.72650K562SSRP1
TNFRSF8ENSG00000120949.10500.43890710.07790-0.504803.520702.07710K562STAU1
TNFRSF8ENSG00000120949.10250.45290559.41010-1.159404.405801.88790K562SUGP2
TNFRSF8ENSG00000120949.10216.76840545.40740-1.331207.259004.63210K562SUPT6H
TNFRSF8ENSG00000120949.10962.10260621.071900.631307.742906.35940K562SYNCRIP
TNFRSF8ENSG00000120949.1028.3694094.38750-1.734305.620803.21700K562TAF15
TNFRSF8ENSG00000120949.10360.68560215.658300.741903.531202.59010K562TIA1
TNFRSF8ENSG00000120949.10333.40560448.60930-0.428202.205701.37940K562TIAL1
TNFRSF8ENSG00000120949.10323.63680211.763800.611803.206402.01680K562TRA2A
TNFRSF8ENSG00000120949.10911.301601219.22000-0.420005.445603.65510K562TROVE2
TNFRSF8ENSG00000120949.1050.0196093.12450-0.896702.536101.49510K562U2AF1
TNFRSF8ENSG00000120949.1043.8677096.20590-1.133004.168803.18580K562U2AF2
TNFRSF8ENSG00000120949.10391.58590754.66230-0.946505.367003.38120K562UTP18
TNFRSF8ENSG00000120949.10438.77550723.96270-0.722408.325206.76460K562WDR3
TNFRSF8ENSG00000120949.10512.61170842.37110-0.716602.332301.55170K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TNFRSF8 is not available on ENCORE database.





1 RBPs can affect the splicing of TNFRSF8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETNFRSF8ENSG00000120949.10chr1+1213221612132299121235261212371812144520121446080.158000.000210.04078includedK562DROSHA

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TNFRSF8 is not avaliable on ENCORE database.