TACC2

General Information

Gene Name       : TACC2
Gene ID             : ENSG00000138162.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TACC2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TACC2ENSG00000138162.180.000.050.03ENCSR000AEF
HepG2TACC2ENSG00000138162.1819.0918.9819.04ENCSR985KAT
K562TACC2ENSG00000138162.180.060.020.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TACC2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TACC2 RNA is bound by 17 proteins.  







eCLIP assay for TACC2 is not avaliable on ENCORE database.





17 proteins are bound to TACC2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10123984222123984289+3'-UTR,CDS,intron-Proximal3.685133.95921HepG2U2AF2
chr10123969911123969963+3'-UTR,CDS,intron-Proximal3.403393.34848HepG2PPIG
chr10123987351123987433+3'-UTR,CDS,intron-Proximal3.337604.02291HepG2GRWD1
chr10123970062123970120+3'-UTR,CDS4.319344.94878HepG2GRWD1
chr10123987353123987443+3'-UTR,CDS3.673687.10944HepG2PPIG
chr10123985931123986025+3'-UTR,CDS,intron-Proximal3.511205.73990HepG2PRPF8
chr10123970424123970547+3'-UTR,CDS3.343575.11909HepG2HLTF
chr10123985912123986001+3'-UTR,CDS,intron-Proximal4.756577.25648HepG2GRWD1
chr10123984282123984381+3'-UTR,CDS,intron-Proximal4.433748.47952HepG2PRPF8
chr10123970548123970604+3'-UTR,CDS4.260013.82973HepG2HLTF
chr10123872546123872651+5'-UTR,intron-Distal4.489619.53026HepG2DDX3X
chr10123976135123976245+5'-UTR,CDS,intron-Proximal3.975667.03378HepG2GRWD1
chr10123976275123976355+5'-UTR,CDS,intron-Proximal3.220374.02291HepG2GRWD1
chr10123976322123976396+5'-UTR,CDS,intron-Proximal4.588369.10443HepG2PRPF8
chr10123845144123845230+CDS,intron-Distal3.350303.61820HepG2HLTF
chr10123844265123844318+CDS,intron-Distal3.899743.57687HepG2EIF3H
chr10123845800123845881+CDS,intron-Distal4.873386.21976HepG2HLTF
chr10124001470124001577+CDS,intron-Proximal3.709356.29405HepG2PRPF8
chr10123845503123845561+CDS,intron-Distal4.494014.56106HepG2EIF3H
chr10123996966123997054+CDS,intron-Proximal3.365244.71371HepG2GRWD1
chr10123842355123842401+CDS,intron-Distal4.719793.33922HepG2EIF3H
chr10124008576124008660+CDS,intron-Proximal4.136073.12746HepG2GRWD1
chr10123987452123987517+CDS3.700203.34184HepG2GRWD1
chr10123846712123846744+CDS,intron-Distal4.820613.33922HepG2EIF3H
chr10123843546123843600+CDS,intron-Distal4.423584.50566HepG2FXR2
chr10123987464123987537+CDS,intron-Proximal4.478934.67689HepG2PPIG
chr10124008563124008669+CDS,intron-Proximal3.186919.88362HepG2PPIG
chr10123843749123843789+CDS,intron-Distal4.494015.02066HepG2EIF3H
chr10124008576124008648+CDS,intron-Proximal4.360814.13543HepG2FXR2
chr10124001471124001519+CDS,intron-Proximal4.397353.29312HepG2FXR2
chr10123843085123843111+CDS,intron-Distal3.949513.65594HepG2EIF3H
chr10123842680123842721+CDS,intron-Distal5.123474.29511HepG2EIF3H
chr10123842924123842989+CDS,intron-Distal5.624764.77840HepG2EIF3H
chr10124008155124008219+CDS,intron-Proximal4.423584.50566HepG2FXR2
chr10123872397123872498+intron-Distal4.673416.13547HepG2NCBP2
chr10123872405123872511+intron-Distal3.786976.95142HepG2DDX3X
chr10123878288123878340+intron-Distal4.458653.86368HepG2HNRNPM
chr10123991838123991922+intron-Distal4.265934.12480HepG2HNRNPM
chr10123978796123978843+intron-Distal4.359443.44037HepG2DDX59
chr10123878726123878810+intron-Distal3.069695.01844HepG2U2AF2
chr10123892296123892395+intron-Distal,intron-Proximal3.817745.00478HepG2PCBP2
chr10124003580124003768+intron-Distal4.079304.12666HepG2HNRNPK
chr10123978900123979002+intron-Distal4.079373.95921HepG2U2AF2
chr10123990598123990658+intron-Distal3.589173.29239HepG2CSTF2
chr10123963933123963989+intron-Distal5.404276.79597HepG2XPO5
chr10123901813123901892+intron-Distal4.455193.97018HepG2HNRNPM
chr10123949309123949354+intron-Distal3.998923.34098HepG2HNRNPM
chr10123979659123979728+intron-Distal3.778593.05187HepG2QKI
chr10124003768124003931+intron-Distal4.131053.65412HepG2HNRNPK
chr10123978683123978844+intron-Distal3.257425.60152HepG2HNRNPK
chr10123984316123984404+intron-Distal,intron-Proximal3.817494.28981HepG2RBM22
chr10123997552123997592+intron-Proximal4.8127111.91804HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TACC2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TACC2 is not available on ENCORE database.

  • 70 RBPs can affect the levels of TACC2.  








The Knockdown/knockout RNA-Seq assay for TACC2 is not available on ENCORE database.





70 RBPs can affect the gene expression of TACC2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TACC2ENSG00000138162.132005.813801097.113200.8704026.1028024.11930HepG2AKAP8L
TACC2ENSG00000138162.131534.864401038.284100.563805.386804.30810HepG2ASCC1
TACC2ENSG00000138162.13736.780101046.80090-0.506703.590902.52520HepG2BCCIP
TACC2ENSG00000138162.131688.032102209.03710-0.388103.704703.02330HepG2BOP1
TACC2ENSG00000138162.131073.730101373.14570-0.354903.364302.52440HepG2CALR
TACC2ENSG00000138162.131631.660101091.749200.5796013.7254012.47710HepG2CKAP4
TACC2ENSG00000138162.131447.39210754.982700.938807.801206.52820HepG2CNOT7
TACC2ENSG00000138162.131639.595102028.02780-0.306702.262101.63180HepG2CPSF6
TACC2ENSG00000138162.131832.041701277.642200.519909.379908.32750HepG2CELF1
TACC2ENSG00000138162.131200.54200949.609000.338203.403502.11700HepG2DDX1
TACC2ENSG00000138162.131290.50440903.325300.514505.313704.40490HepG2DDX21
TACC2ENSG00000138162.13684.23420962.97700-0.493003.132501.76560HepG2DDX27
TACC2ENSG00000138162.131720.638801202.041100.517404.611703.81940HepG2DDX3X
TACC2ENSG00000138162.13768.105701029.24330-0.422202.697401.93150HepG2DDX55
TACC2ENSG00000138162.133281.150202302.970800.510602.550401.61330HepG2DDX59
TACC2ENSG00000138162.13708.774501032.63680-0.542903.896903.17360HepG2DDX6
TACC2ENSG00000138162.13746.03140931.12210-0.319702.054501.43830HepG2DNAJC21
TACC2ENSG00000138162.131063.49270796.431000.417102.924601.99850HepG2EIF3D
TACC2ENSG00000138162.131651.560401298.297200.347102.807001.98760HepG2EIF4G2
TACC2ENSG00000138162.131000.647701417.65580-0.502603.211902.03620HepG2ESF1
TACC2ENSG00000138162.131561.808902043.09350-0.387506.262605.42010HepG2ETF1
TACC2ENSG00000138162.132442.987801652.178600.564205.684704.61990HepG2FIP1L1
TACC2ENSG00000138162.131407.540401026.737800.455003.426102.68980HepG2G3BP1
TACC2ENSG00000138162.13979.78490698.910400.487302.649001.56250HepG2GRSF1
TACC2ENSG00000138162.13869.223401042.52690-0.262302.523801.58690HepG2HDGF
TACC2ENSG00000138162.13997.078001262.52620-0.340503.846802.77180HepG2HNRNPA2B1
TACC2ENSG00000138162.131302.366701586.08300-0.284303.057002.30600HepG2HNRNPF
TACC2ENSG00000138162.13726.089101039.76960-0.518004.490003.61830HepG2HNRNPK
TACC2ENSG00000138162.131025.908101251.36280-0.286603.355102.61910HepG2HNRNPL
TACC2ENSG00000138162.132703.739102193.935700.301302.260201.68510HepG2HNRNPLL
TACC2ENSG00000138162.131758.564301043.640600.752709.368108.20730HepG2IGF2BP2
TACC2ENSG00000138162.131807.919701311.033000.463502.914701.63310HepG2KRR1
TACC2ENSG00000138162.13594.49230947.98530-0.673207.639605.70110HepG2LIN28B
TACC2ENSG00000138162.131652.696401113.438400.569704.913904.09340HepG2MATR3
TACC2ENSG00000138162.131875.813401337.723300.487605.559204.44740HepG2MSI2
TACC2ENSG00000138162.131932.848001139.654800.762009.065507.95810HepG2NCBP2
TACC2ENSG00000138162.13632.86950816.52820-0.367602.738001.32890HepG2NIP7
TACC2ENSG00000138162.132061.78650945.216601.125105.994904.34390HepG2NONO
TACC2ENSG00000138162.131479.980301014.885200.544204.912803.96050HepG2PABPC4
TACC2ENSG00000138162.131284.859301028.134200.321503.651702.69230HepG2PARN
TACC2ENSG00000138162.131811.689001054.950900.7801021.2323019.80760HepG2PCBP1
TACC2ENSG00000138162.13656.87180926.47180-0.496105.851304.81080HepG2PPIL4
TACC2ENSG00000138162.131930.378401073.521200.8464024.4473023.12870HepG2PTBP1
TACC2ENSG00000138162.132325.700901300.351100.8387011.1416010.05390HepG2PUF60
TACC2ENSG00000138162.131775.474701379.376300.364104.050303.24430HepG2PUM2
TACC2ENSG00000138162.131895.079801112.240100.7687022.8154021.36360HepG2PUS1
TACC2ENSG00000138162.131609.834601162.502600.469606.453205.55560HepG2QKI
TACC2ENSG00000138162.131338.612801707.63220-0.351304.020103.42570HepG2RBM22
TACC2ENSG00000138162.131111.94620774.967200.520805.418304.59090HepG2RPS19
TACC2ENSG00000138162.131334.077601025.222300.379802.438501.43250HepG2RPS5
TACC2ENSG00000138162.131348.71180785.290100.780207.849906.60790HepG2RRP9
TACC2ENSG00000138162.131533.95450777.792700.9797015.4718013.37060HepG2SERBP1
TACC2ENSG00000138162.131370.682801078.701300.345504.430003.65040HepG2SMN1
TACC2ENSG00000138162.132206.392101928.679500.194002.047001.59590HepG2SRFBP1
TACC2ENSG00000138162.133639.861802336.577500.639404.893203.53050HepG2SRSF3
TACC2ENSG00000138162.131703.927101283.921500.408206.481305.57800HepG2SRSF5
TACC2ENSG00000138162.131293.955201558.23890-0.268102.797602.09810HepG2SRSF7
TACC2ENSG00000138162.131157.41790949.078700.286203.207202.62230HepG2SRSF9
TACC2ENSG00000138162.131173.856901674.50120-0.5125010.031009.17150HepG2SSB
TACC2ENSG00000138162.131870.860201460.160300.357505.974805.12380HepG2SUCLG1
TACC2ENSG00000138162.13595.106001116.10880-0.907306.751705.32660HepG2SUPT6H
TACC2ENSG00000138162.131346.109601024.564200.393702.327901.70070HepG2SUPV3L1
TACC2ENSG00000138162.131208.115101009.196800.259501.968401.53170HepG2TIAL1
TACC2ENSG00000138162.131437.638001018.367400.497308.760307.84510HepG2TRIM56
TACC2ENSG00000138162.132481.013001413.649200.8114013.6056012.17590HepG2U2AF1
TACC2ENSG00000138162.131776.131401344.718900.401303.000402.12950HepG2UBE2L3
TACC2ENSG00000138162.13697.95310938.10380-0.426602.196701.30810HepG2UPF2
TACC2ENSG00000138162.13761.161401008.57210-0.406002.832202.09960HepG2XRN2
TACC2ENSG00000138162.131141.372501479.79970-0.374605.976205.04910HepG2ZC3H8
TACC2ENSG00000138162.132808.434501628.618800.7860034.2600032.88840HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TACC2 is not available on ENCORE database.





4 RBPs can affect the splicing of TACC2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETACC2ENSG00000138162.13chr10+123974917123974966123969911123971223123976141123976343-0.354000.007060.09886excludedHepG2U2AF1
SETACC2ENSG00000138162.13chr10+123903086123903221123892123123892249123954554123954691-0.266000.000000.00002excludedHepG2U2AF1
SETACC2ENSG00000138162.13chr10+1239888601239890011239873511239875231239969091239970530.229000.000020.00053includedHepG2U2AF2
SETACC2ENSG00000138162.13chr10+1238921231238922491238479921238481061239545541239546910.121000.009180.08536includedHepG2U2AF2
SETACC2ENSG00000138162.13chr10+123903086123903221123892123123892249123954554123954691-0.165000.000000.00000excludedHepG2U2AF2
SETACC2ENSG00000138162.13chr10+1239030861239032211238921231238922491239545541239546910.346000.000000.00000includedHepG2SFPQ
SETACC2ENSG00000138162.13chr10+123972856123972892123969911123971223123974905123974966-0.117000.000410.02377excludedHepG2SFPQ
SETACC2ENSG00000138162.13chr10+123972856123972892123969911123971223123974905123974966-0.081000.000280.05016excludedHepG2RBM15
A3SSTACC2ENSG00000138162.13chr10+1239749051239749661239749171239749661239711261239712230.064000.000240.01208longerHepG2U2AF1
MXETACC2ENSG00000138162.13chr10+123892123123892249123903086123903221123847992123848106123954554123954691-0.340000.000000.000002includedHepG2SFPQ

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TACC2 is not avaliable on ENCORE database.