SP4

General Information

Gene Name       : SP4
Gene ID             : ENSG00000105866.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SP4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SP4ENSG00000105866.1412.0210.1811.10ENCSR000AEF
HepG2SP4ENSG00000105866.141.403.022.21ENCSR985KAT
K562SP4ENSG00000105866.142.853.052.95ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SP4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SP4 RNA is bound by 6 proteins.  







eCLIP assay for SP4 is not avaliable on ENCORE database.





6 proteins are bound to SP4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr72155415221554210+3'-UTR5.447214.51566K562CPEB4
chr72146941321469436+CDS,intron-Distal4.614653.02541K562IGF2BP2
chr72146787521467941+CDS,intron-Proximal5.7935510.04245K562AQR
chr72146998221470084+CDS,intron-Distal3.808793.08128K562IGF2BP1
chr72146943621469462+CDS,intron-Distal4.710553.27203K562IGF2BP2
chr72148837921488490+intron-Distal3.667993.24603K562KHSRP
chr72147121321471336+intron-Distal3.042233.28806K562KHSRP
chr72148422521484301+intron-Distal3.723513.24603K562KHSRP
chr72148056321480631+intron-Distal4.060063.83958HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SP4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SP4 is not available on ENCORE database.

  • 74 RBPs can affect the levels of SP4.  








The Knockdown/knockout RNA-Seq assay for SP4 is not available on ENCORE database.





74 RBPs can affect the gene expression of SP4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SP4ENSG00000105866.9244.74820182.898500.420202.016601.48250HepG2ACO1
SP4ENSG00000105866.9191.44130293.88960-0.618403.973103.17820HepG2AUH
SP4ENSG00000105866.9105.05990169.34210-0.688702.328401.50620HepG2BCLAF1
SP4ENSG00000105866.9148.82220210.50220-0.500201.863301.36400HepG2BOP1
SP4ENSG00000105866.9104.28830182.86560-0.810204.536803.72540HepG2CKAP4
SP4ENSG00000105866.9125.83770193.25520-0.618902.367501.72440HepG2CPSF6
SP4ENSG00000105866.9150.73260229.83580-0.608603.100402.02130HepG2YBX3
SP4ENSG00000105866.9149.06060263.48600-0.821805.488404.64000HepG2CELF1
SP4ENSG00000105866.9197.46710283.27780-0.520603.077402.30230HepG2DAZAP1
SP4ENSG00000105866.9114.72650175.41420-0.612602.348101.71610HepG2DDX21
SP4ENSG00000105866.996.31110191.60230-0.992304.097103.17580HepG2DDX55
SP4ENSG00000105866.9133.66620217.66880-0.703503.491202.39550HepG2DHX30
SP4ENSG00000105866.9157.43850225.68010-0.519502.496101.82390HepG2DNAJC21
SP4ENSG00000105866.9138.03200223.68940-0.696504.301403.52120HepG2DNAJC2
SP4ENSG00000105866.999.82000177.04360-0.826702.722902.13480HepG2EIF2S1
SP4ENSG00000105866.9424.85500190.462001.157408.182907.02950HepG2EIF4B
SP4ENSG00000105866.9166.77420267.73830-0.682903.519202.60970HepG2EIF4G2
SP4ENSG00000105866.9342.81370234.382100.548502.105801.43020HepG2FIP1L1
SP4ENSG00000105866.9118.62470219.07720-0.885004.118003.34900HepG2GPKOW
SP4ENSG00000105866.9148.93360227.84220-0.613402.681802.04400HepG2HNRNPA1
SP4ENSG00000105866.9139.82870218.04630-0.641003.560402.75510HepG2HNRNPF
SP4ENSG00000105866.9133.23700214.71210-0.688403.709402.88170HepG2IGF2BP1
SP4ENSG00000105866.9107.28110186.15170-0.795102.091201.49520HepG2IGF2BP2
SP4ENSG00000105866.9133.76240257.16180-0.943007.893706.72280HepG2ILF2
SP4ENSG00000105866.9242.14340402.16560-0.731904.166903.14170HepG2LARP4
SP4ENSG00000105866.9145.72440268.15270-0.879805.439504.63890HepG2PUF60
SP4ENSG00000105866.9399.98200219.037500.868707.458206.50710HepG2QKI
SP4ENSG00000105866.9373.19960282.010500.404102.277301.79460HepG2RBM22
SP4ENSG00000105866.9307.25450225.067700.449002.137901.65020HepG2NELFE
SP4ENSG00000105866.9319.80920209.605800.609403.832203.12270HepG2RECQL
SP4ENSG00000105866.9134.88320234.90870-0.800404.585003.73580HepG2RPLP0
SP4ENSG00000105866.9101.36930164.92240-0.702202.856702.23290HepG2RPS19
SP4ENSG00000105866.9141.39200224.20070-0.665103.786203.05310HepG2SAFB2
SP4ENSG00000105866.9316.21150225.495200.487701.886201.32680HepG2SF3A3
SP4ENSG00000105866.9190.01100257.13950-0.436502.058401.43650HepG2SLBP
SP4ENSG00000105866.9198.77190261.45520-0.395502.045501.47970HepG2SMN1
SP4ENSG00000105866.9434.20520230.256600.915005.239804.15540HepG2SNRNP70
SP4ENSG00000105866.9190.22320318.52870-0.743705.373704.73890HepG2SRFBP1
SP4ENSG00000105866.9343.13570222.657100.623902.805501.79620HepG2SRSF3
SP4ENSG00000105866.9132.24800214.22780-0.695904.067203.24870HepG2SRSF7
SP4ENSG00000105866.9175.40520276.57280-0.657004.238203.63230HepG2SSB
SP4ENSG00000105866.9206.69590301.11080-0.542803.263402.59910HepG2SUCLG1
SP4ENSG00000105866.9358.97240197.522400.861807.373806.53400HepG2TAF15
SP4ENSG00000105866.9134.99920203.75760-0.593902.265701.60080HepG2TARDBP
SP4ENSG00000105866.979.53680244.62670-1.6209014.6663013.67480HepG2TIAL1
SP4ENSG00000105866.9145.30120246.81640-0.764405.285104.55710HepG2TRIM56
SP4ENSG00000105866.9313.26110200.484200.643803.131302.46540HepG2U2AF1
SP4ENSG00000105866.970.17960112.68240-0.683101.970501.33020HepG2UCHL5
SP4ENSG00000105866.9138.60750199.97900-0.528802.391001.73430HepG2UPF1
SP4ENSG00000105866.986.50920174.67940-1.013803.569102.41960HepG2UPF2
SP4ENSG00000105866.9314.94560186.829700.753303.445002.01750HepG2XRCC5
SP4ENSG00000105866.994.88220187.76580-0.984704.185603.30040HepG2XRN2
SP4ENSG00000105866.9240.91630179.797200.422101.994701.41040HepG2ZC3H8
SP4ENSG00000105866.9115.39120219.93970-0.930606.681205.92820HepG2ZNF622
SP4ENSG00000105866.9281.77050453.25130-0.685804.976804.25270K562AGGF1
SP4ENSG00000105866.9389.74290517.28240-0.408402.359701.81130K562AQR
SP4ENSG00000105866.9424.32690598.50450-0.496204.460203.03370K562CPEB4
SP4ENSG00000105866.9469.03080619.25290-0.400803.379602.66990K562DDX47
SP4ENSG00000105866.9226.53040389.86250-0.783307.084206.01100K562EIF2S2
SP4ENSG00000105866.9320.84020438.99630-0.452402.644301.81490K562FIP1L1
SP4ENSG00000105866.9330.04550519.58620-0.654704.956603.94730K562GRSF1
SP4ENSG00000105866.9403.68300559.65040-0.471303.411902.22260K562HNRNPL
SP4ENSG00000105866.9254.68620361.07350-0.503602.395801.53310K562HNRNPM
SP4ENSG00000105866.9385.05320595.19580-0.628305.222704.14590K562HSPD1
SP4ENSG00000105866.9213.64210341.73450-0.677703.575402.35140K562IGF2BP2
SP4ENSG00000105866.9253.60070347.59300-0.454802.549201.41860K562IGF2BP3
SP4ENSG00000105866.9272.77710359.15620-0.396902.173401.42370K562MAGOH
SP4ENSG00000105866.9431.14940560.74130-0.379102.586201.71260K562MBNL1
SP4ENSG00000105866.9577.36960367.330800.652304.569203.50230K562PCBP3
SP4ENSG00000105866.9442.94870281.752000.652605.280904.17500K562POLR2G
SP4ENSG00000105866.9280.24000498.33730-0.830507.638206.13310K562PPIG
SP4ENSG00000105866.9333.82560467.82820-0.486902.679402.14220K562PUS1
SP4ENSG00000105866.9349.10910455.72990-0.384502.424201.86270K562RBM15
SP4ENSG00000105866.9168.68900278.99780-0.725903.271002.38060K562RPS19
SP4ENSG00000105866.9215.64220294.18170-0.448102.364101.57600K562SF3B4
SP4ENSG00000105866.9230.99210342.07900-0.566503.355402.58170K562SRSF1
SP4ENSG00000105866.9233.31220323.06600-0.469602.352801.39720K562SRSF5
SP4ENSG00000105866.9443.87340582.68240-0.392602.487401.67690K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SP4 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SP4 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SP4 is not avaliable on ENCORE database.