SLC25A17

General Information

Gene Name       : SLC25A17
Gene ID             : ENSG00000100372.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC25A17)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC25A17ENSG00000100372.1431.1138.5634.84ENCSR000AEF
HepG2SLC25A17ENSG00000100372.1415.2721.9218.59ENCSR985KAT
K562SLC25A17ENSG00000100372.1445.6343.9244.78ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC25A17 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC25A17 RNA is bound by 13 proteins.  







eCLIP assay for SLC25A17 is not avaliable on ENCORE database.





13 proteins are bound to SLC25A17 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr224117512541175201-3'-UTR,CDS,intron-Distal,intron-Proximal4.643398.05832K562SF3B4
chr224117297841173048-3'-UTR,CDS,intron-Distal,intron-Proximal4.469394.21433K562PRPF8
chr224116610441166165-3'-UTR,intron-Distal3.582583.80864K562FAM120A
chr224116634341166410-3'-UTR,intron-Distal,intron-Proximal3.636043.80864K562FAM120A
chr224116634341166385-3'-UTR,intron-Distal,intron-Proximal4.074739.54233K562PABPC4
chr224116628441166318-3'-UTR,intron-Distal,intron-Proximal3.685803.80864K562FAM120A
chr224116629141166331-3'-UTR,intron-Distal,intron-Proximal3.454576.22806K562PABPC4
chr224121523141215353-5'-UTR,CDS,intron-Distal,intron-Proximal3.309088.86075K562DDX3X
chr224119505541195113-5'-UTR,CDS,intron-Distal,intron-Proximal5.455118.83608K562AQR
chr224119502041195055-5'-UTR,CDS,intron-Distal,intron-Proximal4.992115.69951K562AQR
chr224121528941215365-5'-UTR,intron-Distal,intron-Proximal3.248923.64037HepG2NCBP2
chr224121519841215231-5'-UTR,CDS,intron-Distal3.057613.38111K562DDX3X
chr224117532741175422-5'-UTR,intron-Distal3.622136.04886K562KHSRP
chr224117542241175594-5'-UTR,intron-Distal3.9865913.61684K562KHSRP
chr224119502041195041-5'-UTR,CDS,intron-Distal,intron-Proximal3.715914.65388K562PRPF8
chr224121514441215201-5'-UTR,CDS,intron-Distal5.5676618.99614K562AQR
chr224119500841195105-5'-UTR,CDS,intron-Distal,intron-Proximal4.093254.75655HepG2PRPF8
chr224121510841215144-intron-Distal4.167369.59600K562AQR
chr224120094441201001-intron-Distal4.439835.07733HepG2PTBP1
chr224118771041187850-intron-Distal3.818527.48125K562QKI
chr224121505741215108-intron-Distal3.929357.64728K562AQR
chr224118828341188383-intron-Distal4.318505.02888K562KHSRP
chr224118152941181589-intron-Distal4.128813.83958HepG2QKI
chr224120674741206852-intron-Distal3.765503.06411K562KHDRBS1
chr224120095341200997-intron-Distal4.8945811.52400K562PTBP1
chr224121417841214292-intron-Distal3.029843.00914HepG2PTBP1
chr224118311241183202-intron-Distal3.504283.76275K562PTBP1
chr224117817941178230-intron-Distal3.968493.03671K562HNRNPM
chr224121417441214340-intron-Distal3.213095.29274K562PTBP1
chr224118305041183212-intron-Distal4.654035.01208K562MATR3
chr224121418641214288-intron-Distal4.002033.47525K562MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC25A17 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC25A17 is not available on ENCORE database.

  • 58 RBPs can affect the levels of SLC25A17.  








The Knockdown/knockout RNA-Seq assay for SLC25A17 is not available on ENCORE database.





58 RBPs can affect the gene expression of SLC25A17 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC25A17ENSG00000100372.10387.99020311.380400.317201.859401.34300HepG2ACO1
SLC25A17ENSG00000100372.10362.86270535.90970-0.562603.593302.70100HepG2ASCC1
SLC25A17ENSG00000100372.10251.93150368.46000-0.548502.291101.47510HepG2BCLAF1
SLC25A17ENSG00000100372.10328.04050509.14970-0.634204.297203.34590HepG2CIRBP
SLC25A17ENSG00000100372.10198.71950311.30480-0.647604.963304.12020HepG2CKAP4
SLC25A17ENSG00000100372.1094.91650166.95740-0.814703.228802.49160HepG2CPSF6
SLC25A17ENSG00000100372.10313.28890532.95060-0.766505.431804.59230HepG2DDX6
SLC25A17ENSG00000100372.10242.92440512.36120-1.076709.973508.88840HepG2EIF2S1
SLC25A17ENSG00000100372.10386.44050566.23040-0.551103.286702.59170HepG2EIF4A3
SLC25A17ENSG00000100372.10258.01710551.28370-1.095308.460507.29160HepG2EIF4B
SLC25A17ENSG00000100372.10329.29750520.33800-0.660105.021603.94420HepG2EIF4G2
SLC25A17ENSG00000100372.10456.80730655.58350-0.521205.620604.81370HepG2ETF1
SLC25A17ENSG00000100372.10402.68100571.26930-0.504503.140202.40360HepG2FXR1
SLC25A17ENSG00000100372.10335.89540529.95360-0.657904.518403.67690HepG2G3BP1
SLC25A17ENSG00000100372.10408.07710562.59070-0.463202.703401.82410HepG2G3BP2
SLC25A17ENSG00000100372.10173.07320324.75350-0.908006.303404.74170HepG2GNB2L1
SLC25A17ENSG00000100372.10171.05290270.96270-0.663703.284702.58890HepG2HNRNPA1
SLC25A17ENSG00000100372.10329.56830536.58500-0.703205.405104.45270HepG2HNRNPK
SLC25A17ENSG00000100372.10131.84230299.38930-1.183209.083608.03290HepG2HNRNPU
SLC25A17ENSG00000100372.10343.18650538.69250-0.650504.602103.75120HepG2IGF2BP2
SLC25A17ENSG00000100372.10188.97820305.81890-0.694504.865503.91570HepG2ILF2
SLC25A17ENSG00000100372.10289.37650541.82090-0.904906.606504.98330HepG2KHSRP
SLC25A17ENSG00000100372.10369.70850571.46860-0.628304.367803.54620HepG2MAGOH
SLC25A17ENSG00000100372.10292.42270199.381900.552402.709201.90790HepG2MSI2
SLC25A17ENSG00000100372.10200.46610267.03400-0.413702.025301.38590HepG2PPIL4
SLC25A17ENSG00000100372.10380.63280552.83070-0.538404.264103.44230HepG2PUM2
SLC25A17ENSG00000100372.10348.64350479.81860-0.460703.016702.31630HepG2RBM25
SLC25A17ENSG00000100372.10445.42560543.26900-0.286501.771601.31810HepG2NELFE
SLC25A17ENSG00000100372.10186.85450266.62830-0.512902.919902.26260HepG2SAFB2
SLC25A17ENSG00000100372.10354.20870508.24350-0.520904.379603.66130HepG2SF3B4
SLC25A17ENSG00000100372.10333.64240499.72580-0.582805.672004.72780HepG2SLBP
SLC25A17ENSG00000100372.10336.35230431.57280-0.359602.411401.88910HepG2SRSF9
SLC25A17ENSG00000100372.10439.45150537.28530-0.290002.014501.55930HepG2SSB
SLC25A17ENSG00000100372.1090.74140166.34880-0.874403.875902.77440HepG2SUPT6H
SLC25A17ENSG00000100372.10251.95480415.00360-0.720003.636502.87750HepG2SUPV3L1
SLC25A17ENSG00000100372.10205.95330290.96940-0.498502.066101.62110HepG2TIAL1
SLC25A17ENSG00000100372.10386.28020538.94920-0.480502.353601.58610HepG2UBE2L3
SLC25A17ENSG00000100372.10300.86620221.934100.438902.296901.74000HepG2UTP3
SLC25A17ENSG00000100372.10667.690401164.76470-0.802803.875702.40430K562ABCF1
SLC25A17ENSG00000100372.10756.116701043.70170-0.465005.778005.00590K562AGGF1
SLC25A17ENSG00000100372.101556.231302059.22420-0.404003.929603.25410K562AQR
SLC25A17ENSG00000100372.10267.39230426.56890-0.673805.040403.52100K562CCAR1
SLC25A17ENSG00000100372.10789.534401138.38680-0.527904.095102.28260K562CKAP4
SLC25A17ENSG00000100372.10680.40790894.28570-0.394303.310902.16020K562DDX3X
SLC25A17ENSG00000100372.10309.33860477.51710-0.626404.476702.71800K562DHX30
SLC25A17ENSG00000100372.10860.510701324.69570-0.6224010.710809.43610K562EIF2S2
SLC25A17ENSG00000100372.10675.78210841.35050-0.316102.639701.52230K562EIF4B
SLC25A17ENSG00000100372.101591.297802097.42490-0.398406.076604.69980K562EIF4G2
SLC25A17ENSG00000100372.10358.39820502.72540-0.488202.913602.03550K562FMR1
SLC25A17ENSG00000100372.10296.06710426.10940-0.525302.880801.94760K562FTO
SLC25A17ENSG00000100372.101098.670101340.82810-0.287402.308601.33390K562HNRNPA1
SLC25A17ENSG00000100372.10433.62950699.21280-0.689306.932306.02750K562HNRNPC
SLC25A17ENSG00000100372.101126.780101484.87520-0.398104.744903.56680K562HNRNPU
SLC25A17ENSG00000100372.10253.80360402.80200-0.666403.479402.41820K562KRR1
SLC25A17ENSG00000100372.101620.054602155.17860-0.411805.169603.28940K562PNPT1
SLC25A17ENSG00000100372.101716.282502384.92910-0.474708.354306.66210K562PUM2
SLC25A17ENSG00000100372.10954.458101242.58830-0.380603.121402.22400K562RBM22
SLC25A17ENSG00000100372.10656.80630860.96420-0.390503.271801.81490K562RBM25
SLC25A17ENSG00000100372.10787.62650608.939100.371102.612401.56300K562SAFB
SLC25A17ENSG00000100372.10307.03810448.63880-0.547102.876301.88290K562SF3B1
SLC25A17ENSG00000100372.10980.611501285.61960-0.390703.031402.29080K562TARDBP
SLC25A17ENSG00000100372.10974.627201240.11120-0.347503.080802.20880K562TIA1
SLC25A17ENSG00000100372.10689.73280908.66910-0.397703.556802.64550K562U2AF2
SLC25A17ENSG00000100372.10797.368601020.67680-0.356204.095503.23760K562UPF1
SLC25A17ENSG00000100372.101742.688102319.82580-0.412704.398603.27000K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC25A17 is not available on ENCORE database.





13 RBPs can affect the splicing of SLC25A17 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC25A17ENSG00000100372.10chr22-411885284118868041175012411751294121519841215354-0.168000.000110.04905excludedK562IGF2BP2
SESLC25A17ENSG00000100372.10chr22-4119502641195087411750124117512941215198412153300.209000.000150.06080includedK562XRN2
SESLC25A17ENSG00000100372.10chr22-411950264119508741175021411751294121519841215393-0.144000.000000.00008excludedK562AKAP8L
SESLC25A17ENSG00000100372.10chr22-4119502641195087411750124117512941215198412153300.194000.000970.07038includedK562SUPV3L1
SESLC25A17ENSG00000100372.10chr22-411950264119508741175012411751294121519841215330-0.298000.000000.00000excludedK562PUS1
SESLC25A17ENSG00000100372.10chr22-4119502641195087411750124117512941215198412153300.212000.000300.08542includedK562UCHL5
SESLC25A17ENSG00000100372.10chr22-4121320641213381411950264119508741215198412153420.237000.000930.02131includedK562U2AF1
SESLC25A17ENSG00000100372.10chr22-411950264119508741175012411751294121519841215330-0.179000.000010.00057excludedK562UTP18
SESLC25A17ENSG00000100372.10chr22-411905174119058441188528411886804119502641195087-0.108000.000410.00955excludedK562U2AF2
SESLC25A17ENSG00000100372.10chr22-411950264119508741175012411751294121519841215330-0.111000.000040.00196excludedK562RBM15
SESLC25A17ENSG00000100372.10chr22-411950264119508741175012411751294121519841215330-0.288000.000000.00000excludedK562AGGF1
A3SSSLC25A17ENSG00000100372.10chr22-4117323141173426411732314117337741175012411751290.107000.000000.00000longerK562AQR
MXESLC25A17ENSG00000100372.10chr22-4118852841188680411905174119058441175012411751294119502641195087-0.132000.004070.056122includedK562U2AF1
MXESLC25A17ENSG00000100372.10chr22-41188528411886804119328741193340411750124117512941195026411950870.118000.000420.017281includedK562XRN2
MXESLC25A17ENSG00000100372.10chr22-4118852841188680411905174119058441175012411751294119502641195087-0.162000.000500.009142includedK562U2AF2
MXESLC25A17ENSG00000100372.10chr22-41188528411886804119051741190584411750124117512941195026411950870.229000.000730.027741includedHepG2PCBP1
MXESLC25A17ENSG00000100372.10chr22-41188528411886804119328741193340411750124117512941195026411950870.093000.002470.048411includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC25A17 is not avaliable on ENCORE database.