SLC25A16

General Information

Gene Name       : SLC25A16
Gene ID             : ENSG00000122912.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC25A16)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC25A16ENSG00000122912.143.013.743.38ENCSR000AEF
HepG2SLC25A16ENSG00000122912.144.106.445.27ENCSR985KAT
K562SLC25A16ENSG00000122912.146.908.097.50ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC25A16 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC25A16 RNA is bound by 12 proteins.  







eCLIP assay for SLC25A16 is not avaliable on ENCORE database.





12 proteins are bound to SLC25A16 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr107024690670246947-3'-UTR,CDS,intron-Distal3.422594.74886HepG2BCLAF1
chr107026338870263439-3'-UTR,CDS,intron-Distal,intron-Proximal3.759395.56491HepG2BCLAF1
chr107024832370248357-3'-UTR,CDS,intron-Distal,intron-Proximal3.826265.35703HepG2BCLAF1
chr107027683970276902-5'-UTR,CDS,intron-Distal,intron-Proximal4.060029.09836HepG2BCLAF1
chr107027693670277021-5'-UTR,CDS,intron-Distal,intron-Proximal3.529154.56136K562GRWD1
chr107027691570277018-5'-UTR,CDS,intron-Distal,intron-Proximal3.5130614.06664K562UCHL5
chr107027690170277012-5'-UTR,CDS,intron-Distal,intron-Proximal5.051788.78094HepG2GRWD1
chr107028694470287024-5'-UTR,CDS,intron-Distal4.110099.09021HepG2PRPF8
chr107028711570287185-5'-UTR,CDS,intron-Distal,intron-Proximal3.525563.86318K562DGCR8
chr107027684170276901-5'-UTR,CDS,intron-Distal3.232863.17744HepG2GRWD1
chr107028696270287021-5'-UTR,CDS,intron-Distal4.234833.15171K562SRSF1
chr107027683870276915-5'-UTR,CDS,intron-Distal,intron-Proximal4.7814015.56361K562UCHL5
chr107026126370261367-intron-Distal5.517117.34252HepG2PCBP2
chr107026244970262539-intron-Distal4.6901611.66751HepG2PCBP2
chr107026157070261636-intron-Distal3.067403.15376K562ILF3
chr107028458170284637-intron-Distal3.650604.61874HepG2HNRNPC
chr107028316170283210-intron-Distal3.363355.61667K562ILF3
chr107028475870284812-intron-Distal4.086723.84404HepG2HNRNPC
chr107028122370281288-intron-Distal4.117646.83369K562ILF3
chr107028204070282139-intron-Distal4.507303.41738HepG2PTBP1
chr107026243470262528-intron-Distal4.193016.34081K562ILF3
chr107026244270262547-intron-Distal4.092293.24590HepG2ILF3
chr107028539470285449-intron-Distal5.359098.92257HepG2U2AF2
chr107026244670262540-intron-Distal4.660463.23168HepG2DDX59
chr107028223070282278-intron-Distal3.358725.15138K562ILF3
chr107026116770261215-intron-Distal3.021795.96576K562ILF3
chr107026121570261237-intron-Distal3.187105.38405K562ILF3
chr107026157370261617-intron-Distal3.703494.60998HepG2PCBP2
chr107028282370282856-intron-Distal3.140543.37821K562ILF3
chr107027707970277135-intron-Distal,intron-Proximal3.435094.95320HepG2U2AF2
chr107028307670283161-intron-Distal3.224365.02826K562ILF3
chr107025418670254289-intron-Distal4.987676.57498HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC25A16 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC25A16 is not available on ENCORE database.

  • 73 RBPs can affect the levels of SLC25A16.  








The Knockdown/knockout RNA-Seq assay for SLC25A16 is not available on ENCORE database.





73 RBPs can affect the gene expression of SLC25A16 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC25A16ENSG00000122912.10158.39750220.97570-0.480302.336301.76980HepG2ACO1
SLC25A16ENSG00000122912.10622.62960365.007500.770309.901608.73660HepG2AUH
SLC25A16ENSG00000122912.10327.48530212.988600.620603.280202.26210HepG2BCCIP
SLC25A16ENSG00000122912.10269.96280185.103100.544302.607701.73300HepG2BCLAF1
SLC25A16ENSG00000122912.10361.71480199.608700.857607.164505.99850HepG2CALR
SLC25A16ENSG00000122912.10354.05050248.977600.507802.528801.78490HepG2CIRBP
SLC25A16ENSG00000122912.10290.60780220.965900.395102.135701.54030HepG2CKAP4
SLC25A16ENSG00000122912.10285.88110188.388300.601602.208601.53060HepG2CNOT7
SLC25A16ENSG00000122912.10290.86150190.675500.609103.287402.55150HepG2DDX21
SLC25A16ENSG00000122912.10445.30660303.403900.553503.103202.44550HepG2DDX3X
SLC25A16ENSG00000122912.10317.93590209.395000.602403.097502.28680HepG2DDX55
SLC25A16ENSG00000122912.10339.64990189.414800.842405.903204.48140HepG2DDX5
SLC25A16ENSG00000122912.10298.92550211.423800.499502.813202.13050HepG2DKC1
SLC25A16ENSG00000122912.10198.63820120.963500.715503.119201.94360HepG2EFTUD2
SLC25A16ENSG00000122912.10492.35290250.550800.974508.374807.38100HepG2EIF2S1
SLC25A16ENSG00000122912.10530.59310276.898600.938107.887406.81000HepG2EIF4A3
SLC25A16ENSG00000122912.10160.64010269.57950-0.746903.146302.41570HepG2EIF4B
SLC25A16ENSG00000122912.10516.57600373.038900.469603.751602.80160HepG2EIF4G1
SLC25A16ENSG00000122912.10598.74390419.091300.514605.000404.23460HepG2ETF1
SLC25A16ENSG00000122912.10301.95240196.538200.619402.910202.25500HepG2GPKOW
SLC25A16ENSG00000122912.10250.68280168.066900.576702.510501.89200HepG2HNRNPA1
SLC25A16ENSG00000122912.10393.45750262.375900.584503.360002.59360HepG2HNRNPK
SLC25A16ENSG00000122912.10407.59280187.560201.119709.706608.60710HepG2HNRNPLL
SLC25A16ENSG00000122912.10339.60730186.479900.864706.439205.25470HepG2MSI2
SLC25A16ENSG00000122912.10581.81270287.637501.016209.547608.41120HepG2NCBP2
SLC25A16ENSG00000122912.10452.21170256.179300.819706.227005.15570HepG2PABPC4
SLC25A16ENSG00000122912.10256.39840176.714500.536903.033402.22860HepG2PRPF4
SLC25A16ENSG00000122912.10241.51190161.623400.579402.712701.91150HepG2PRPF8
SLC25A16ENSG00000122912.10404.98880222.776800.862208.812307.94790HepG2PTBP1
SLC25A16ENSG00000122912.10241.68280379.94010-0.652705.745704.95480HepG2PUM1
SLC25A16ENSG00000122912.10266.72430379.65900-0.509403.066102.35950HepG2PUM2
SLC25A16ENSG00000122912.10344.03450225.083700.612004.716403.95250HepG2PUS1
SLC25A16ENSG00000122912.10524.55220241.244401.1205014.2739013.01120HepG2QKI
SLC25A16ENSG00000122912.10438.10000350.279900.322701.779301.33980HepG2RBM22
SLC25A16ENSG00000122912.10383.93600218.955500.810106.570505.57230HepG2RBM25
SLC25A16ENSG00000122912.10345.59430254.725700.440002.190501.57360HepG2RPLP0
SLC25A16ENSG00000122912.10336.78190222.570800.597502.247401.39340HepG2RPS10
SLC25A16ENSG00000122912.10207.83260115.033200.853304.087402.94890HepG2SERBP1
SLC25A16ENSG00000122912.1096.61810230.18110-1.252403.354501.82530HepG2SF1
SLC25A16ENSG00000122912.10422.05380295.721700.513102.351201.73080HepG2SF3A3
SLC25A16ENSG00000122912.10348.41340231.915500.587104.061603.36730HepG2SF3B4
SLC25A16ENSG00000122912.10513.72410395.623100.376802.668102.17270HepG2SRFBP1
SLC25A16ENSG00000122912.10376.78840242.079300.638204.904304.32090HepG2SRSF1
SLC25A16ENSG00000122912.10270.25710353.38820-0.386902.100001.54570HepG2SRSF5
SLC25A16ENSG00000122912.10365.66630196.952800.892609.371108.46070HepG2SRSF9
SLC25A16ENSG00000122912.10580.20470343.485600.756209.374808.53920HepG2SSB
SLC25A16ENSG00000122912.10304.43340401.89380-0.400702.592201.98600HepG2SUCLG1
SLC25A16ENSG00000122912.10287.40410208.476200.463102.014401.42380HepG2SUPV3L1
SLC25A16ENSG00000122912.10295.06730182.819200.690503.821902.98520HepG2TARDBP
SLC25A16ENSG00000122912.10290.81240199.932000.540503.179502.28840HepG2TIA1
SLC25A16ENSG00000122912.10408.79620180.416001.1800013.6440012.67730HepG2TIAL1
SLC25A16ENSG00000122912.10246.29060123.171600.999606.975105.76040HepG2UCHL5
SLC25A16ENSG00000122912.10358.07350262.258700.449202.948402.23130HepG2UPF1
SLC25A16ENSG00000122912.10331.72600169.320500.970106.152804.52720HepG2XPO5
SLC25A16ENSG00000122912.10300.44020174.388300.784706.337605.38970HepG2ZC3H8
SLC25A16ENSG00000122912.10508.55470288.436200.8181010.9560010.04560HepG2ZNF622
SLC25A16ENSG00000122912.10538.53300862.50990-0.679506.371005.54170K562AQR
SLC25A16ENSG00000122912.10125.46110188.42760-0.586802.279401.33970K562CCAR1
SLC25A16ENSG00000122912.10168.61590248.21080-0.557802.744501.96570K562CPSF6
SLC25A16ENSG00000122912.10493.02640669.55410-0.441504.300103.51310K562DDX47
SLC25A16ENSG00000122912.10260.49750348.62610-0.420402.632601.51810K562EIF4B
SLC25A16ENSG00000122912.10426.86630637.77930-0.579304.773403.78070K562GRSF1
SLC25A16ENSG00000122912.10195.43020339.24550-0.795705.157904.36580K562HNRNPC
SLC25A16ENSG00000122912.10237.16810348.90710-0.556902.748801.82290K562HNRNPM
SLC25A16ENSG00000122912.10381.40230529.61450-0.473602.516001.55290K562IGF2BP2
SLC25A16ENSG00000122912.10427.98780556.61610-0.379102.519901.71600K562MAGOH
SLC25A16ENSG00000122912.10528.46530738.15490-0.482103.260202.25910K562MBNL1
SLC25A16ENSG00000122912.10235.05690379.09230-0.689504.113302.46020K562NONO
SLC25A16ENSG00000122912.10393.17230516.85320-0.394603.019302.24350K562NSUN2
SLC25A16ENSG00000122912.10331.88910481.54630-0.537003.608502.65270K562PPIG
SLC25A16ENSG00000122912.10256.42230374.58180-0.546802.703101.96200K562PRPF8
SLC25A16ENSG00000122912.10703.87250928.74020-0.400003.498002.41870K562PUM2
SLC25A16ENSG00000122912.10475.69190615.84880-0.372502.019201.54120K562PUS1
SLC25A16ENSG00000122912.10260.34390381.61050-0.551702.651301.85470K562RPS19
SLC25A16ENSG00000122912.10297.97270530.14980-0.831208.469807.23840K562SRSF1
SLC25A16ENSG00000122912.10377.75200500.68320-0.406502.447901.46740K562SRSF5
SLC25A16ENSG00000122912.10382.66720507.87470-0.408402.306701.32930K562TRA2A
SLC25A16ENSG00000122912.10219.11770310.68400-0.503702.267201.42410K562TRIM56
SLC25A16ENSG00000122912.10406.05780624.24210-0.620402.712401.43740K562UTP18
SLC25A16ENSG00000122912.10650.73710971.68250-0.578406.067004.70660K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC25A16 is not available on ENCORE database.





4 RBPs can affect the splicing of SLC25A16 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC25A16ENSG00000122912.10chr10-702768407027702270276507702766007028700270287173-0.697000.000010.00296excludedK562FTO
SESLC25A16ENSG00000122912.10chr10-702561907025626970253205702533277026338870263452-0.116000.004750.07119excludedK562SF3B4
SESLC25A16ENSG00000122912.10chr10-702561907025626970253205702533277026338870263452-0.072000.003470.09596excludedK562HNRNPU
A3SSSLC25A16ENSG00000122912.10chr10-7026338870263496702633887026345270266341702664750.151000.000010.00006longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC25A16 is not avaliable on ENCORE database.