RP11-480A16.1

General Information

Gene Name       : RP11-480A16.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-480A16.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-480A16.1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on RP11-480A16.1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP11-480A16.1 is not avaliable on ENCORE database.






NO known proteins are bound to RP11-480A16.1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP11-480A16.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-480A16.1 is not available on ENCORE database.

  • 80 RBPs can affect the levels of RP11-480A16.1.  








The Knockdown/knockout RNA-Seq assay for RP11-480A16.1 is not available on ENCORE database.





80 RBPs can affect the gene expression of RP11-480A16.1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-480A16.1ENSG00000260261.1144.72310207.76670-0.521702.387701.74150HepG2AUH
RP11-480A16.1ENSG00000260261.1177.88020113.293700.650702.325201.60980HepG2DDX55
RP11-480A16.1ENSG00000260261.1151.6702058.246901.380604.910304.13200HepG2EIF2S1
RP11-480A16.1ENSG00000260261.1134.3256064.367901.061204.042603.27370HepG2EIF4A3
RP11-480A16.1ENSG00000260261.1115.9716062.674600.887702.378701.73880HepG2EIF4B
RP11-480A16.1ENSG00000260261.1118.73590171.64050-0.531602.049401.31070HepG2EIF4G1
RP11-480A16.1ENSG00000260261.1150.9896061.173301.303406.790603.75830HepG2EXOSC5
RP11-480A16.1ENSG00000260261.1214.74080106.549901.011005.645703.24790HepG2EXOSC9
RP11-480A16.1ENSG00000260261.175.3590027.340101.462704.242203.27930HepG2FUBP3
RP11-480A16.1ENSG00000260261.1129.9099064.950001.000003.608002.82470HepG2FXR1
RP11-480A16.1ENSG00000260261.1171.9752060.247701.513108.700507.55610HepG2G3BP1
RP11-480A16.1ENSG00000260261.1128.8178063.964501.009903.645402.61580HepG2G3BP2
RP11-480A16.1ENSG00000260261.1159.0776061.013001.382406.750205.69510HepG2HNRNPK
RP11-480A16.1ENSG00000260261.1263.99600158.514700.735804.965504.08280HepG2HNRNPL
RP11-480A16.1ENSG00000260261.1122.9606061.239501.005603.426802.68300HepG2IGF2BP2
RP11-480A16.1ENSG00000260261.1145.6299061.598401.241204.955103.57670HepG2KHSRP
RP11-480A16.1ENSG00000260261.1135.7674064.972701.063104.103203.30670HepG2MAGOH
RP11-480A16.1ENSG00000260261.1199.3970065.335401.609609.352708.24950HepG2MATR3
RP11-480A16.1ENSG00000260261.1251.7300066.873701.9123015.1369013.73590HepG2NCBP2
RP11-480A16.1ENSG00000260261.1104.8032059.552100.815402.359601.68860HepG2PABPC4
RP11-480A16.1ENSG00000260261.185.7739048.882400.811102.297901.73480HepG2PCBP1
RP11-480A16.1ENSG00000260261.1176.3777049.740901.8261013.6792012.64440HepG2PTBP1
RP11-480A16.1ENSG00000260261.189.55440164.69760-0.879004.006003.30340HepG2PUF60
RP11-480A16.1ENSG00000260261.1272.36550174.823800.639503.339402.70120HepG2PUM1
RP11-480A16.1ENSG00000260261.1141.2563053.868001.390706.806905.89140HepG2QKI
RP11-480A16.1ENSG00000260261.1124.7114060.905501.033803.467701.52270HepG2RBM14
RP11-480A16.1ENSG00000260261.190.83440148.75760-0.711702.772201.91510HepG2RBM15
RP11-480A16.1ENSG00000260261.1109.9777048.889701.169504.416203.58040HepG2RBM25
RP11-480A16.1ENSG00000260261.1148.1481055.355801.420107.193106.39170HepG2NELFE
RP11-480A16.1ENSG00000260261.1109.0028051.558301.080003.914203.19800HepG2RECQL
RP11-480A16.1ENSG00000260261.187.63970158.02100-0.850503.610702.37610HepG2RPS5
RP11-480A16.1ENSG00000260261.169.02690143.28670-1.053704.113603.28330HepG2SF3A3
RP11-480A16.1ENSG00000260261.1214.7258051.784502.0518017.7537016.45580HepG2SF3B4
RP11-480A16.1ENSG00000260261.188.3676054.052700.709001.699701.30340HepG2SRSF1
RP11-480A16.1ENSG00000260261.199.5122043.975501.178104.765404.07840HepG2SRSF9
RP11-480A16.1ENSG00000260261.155.53240113.07990-1.025903.628202.35140HepG2STIP1
RP11-480A16.1ENSG00000260261.1144.2488048.587201.569806.227705.44420HepG2TAF15
RP11-480A16.1ENSG00000260261.1113.8185066.639600.772202.738901.98240HepG2UCHL5
RP11-480A16.1ENSG00000260261.158.57100116.47500-0.991803.538702.29050HepG2XPO5
RP11-480A16.1ENSG00000260261.165.64220102.87630-0.648201.952701.37340HepG2ZC3H8
RP11-480A16.1ENSG00000260261.182.90380139.75630-0.753403.263902.68440HepG2ZNF622
RP11-480A16.1ENSG00000260261.1469.19630826.46720-0.816808.595307.66800K562AGGF1
RP11-480A16.1ENSG00000260261.1549.51590908.05770-0.724608.878106.84550K562AKAP8
RP11-480A16.1ENSG00000260261.1539.41620859.95080-0.672903.755402.99230K562AKAP8L
RP11-480A16.1ENSG00000260261.1661.84630902.24660-0.447003.445802.41660K562ATP5C1
RP11-480A16.1ENSG00000260261.1679.77190987.75740-0.539105.589603.88090K562CCDC124
RP11-480A16.1ENSG00000260261.1414.48030933.45460-1.1713027.5414025.69390K562DDX47
RP11-480A16.1ENSG00000260261.1713.65150925.53030-0.375103.234002.27730K562DKC1
RP11-480A16.1ENSG00000260261.1453.01960682.28700-0.590803.551902.08340K562EEF2
RP11-480A16.1ENSG00000260261.1222.37330445.34820-1.002006.065004.53910K562EIF3A
RP11-480A16.1ENSG00000260261.1489.94250705.85090-0.526803.330402.18710K562EIF3D
RP11-480A16.1ENSG00000260261.1384.83210510.36820-0.407302.849002.04120K562EIF3G
RP11-480A16.1ENSG00000260261.11071.062101437.25930-0.424305.455104.15680K562EIF4G2
RP11-480A16.1ENSG00000260261.1441.95680603.75900-0.450102.845301.98420K562FIP1L1
RP11-480A16.1ENSG00000260261.1717.006901022.45020-0.512004.903603.89950K562GRSF1
RP11-480A16.1ENSG00000260261.1596.33880406.990300.551004.282002.82580K562HNRNPF
RP11-480A16.1ENSG00000260261.11217.59680835.100600.543907.529806.05930K562HNRNPU
RP11-480A16.1ENSG00000260261.1430.56950818.50190-0.9267011.237009.65930K562HSPD1
RP11-480A16.1ENSG00000260261.1515.93050912.71310-0.8230010.213708.34830K562KIF1C
RP11-480A16.1ENSG00000260261.1583.09390406.356900.520903.962402.04920K562LSM11
RP11-480A16.1ENSG00000260261.1531.82900873.61770-0.716008.493506.21170K562MAK16
RP11-480A16.1ENSG00000260261.1661.921201022.45660-0.627306.411904.91930K562MBNL1
RP11-480A16.1ENSG00000260261.1800.73010615.256200.380003.740302.81150K562MTPAP
RP11-480A16.1ENSG00000260261.1425.10790716.66010-0.753505.527004.12790K562NAA15
RP11-480A16.1ENSG00000260261.1932.50870683.609100.447806.289005.22610K562NSUN2
RP11-480A16.1ENSG00000260261.1724.37390448.723800.690805.866503.53280K562NUSAP1
RP11-480A16.1ENSG00000260261.11399.77140479.932101.5442012.7034010.05820K562PABPN1
RP11-480A16.1ENSG00000260261.1714.77100444.967200.683706.375704.14320K562PHF6
RP11-480A16.1ENSG00000260261.11122.83240826.331900.442203.341701.60890K562PKM
RP11-480A16.1ENSG00000260261.1294.31540641.50770-1.1241012.9046011.27420K562PRPF8
RP11-480A16.1ENSG00000260261.1632.74930408.651200.630705.512704.17380K562PSIP1
RP11-480A16.1ENSG00000260261.1871.26670623.638500.482304.731203.88500K562PTBP1
RP11-480A16.1ENSG00000260261.1842.734101568.14830-0.8959014.4270012.54810K562PUF60
RP11-480A16.1ENSG00000260261.1401.29220853.01970-1.0879012.4911011.38300K562PUS1
RP11-480A16.1ENSG00000260261.1369.34420830.98630-1.169906.193305.33180K562RBM15
RP11-480A16.1ENSG00000260261.1509.06190372.807000.449303.049702.00340K562RCC2
RP11-480A16.1ENSG00000260261.1222.61890653.45780-1.5535020.7319018.52870K562RPS19
RP11-480A16.1ENSG00000260261.1275.06490655.92580-1.2538012.257109.62760K562RRP9
RP11-480A16.1ENSG00000260261.1492.65380353.414600.479102.740801.72280K562SRFBP1
RP11-480A16.1ENSG00000260261.1411.46110586.19160-0.510604.234103.21230K562SYNCRIP
RP11-480A16.1ENSG00000260261.1370.95250519.27780-0.485303.653002.72780K562U2AF2
RP11-480A16.1ENSG00000260261.1491.13700657.38700-0.420602.532501.56440K562UCHL5
RP11-480A16.1ENSG00000260261.1410.62020864.68650-1.074407.392905.00990K562UTP18
RP11-480A16.1ENSG00000260261.11051.213501486.47050-0.499804.447902.80060K562WRN
RP11-480A16.1ENSG00000260261.11042.300401413.13150-0.439104.255103.14660K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-480A16.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-480A16.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-480A16.1 is not avaliable on ENCORE database.