PTPRG

General Information

Gene Name       : PTPRG
Gene ID             : ENSG00000144724.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PTPRG)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PTPRGENSG00000144724.191.261.171.21ENCSR000AEF
HepG2PTPRGENSG00000144724.1912.8214.6213.72ENCSR985KAT
K562PTPRGENSG00000144724.190.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PTPRG is not avaliable on ENCORE database.



Proteins bound to RNA
  • PTPRG RNA is bound by 27 proteins.  







eCLIP assay for PTPRG is not avaliable on ENCORE database.





27 proteins are bound to PTPRG RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr36154778561547880+5'-UTR3.2673733.85434HepG2DDX3X
chr36154758461547667+5'-UTR3.7677328.21794HepG2DDX3X
chr36154772061547756+5'-UTR3.6305810.68796HepG2DDX3X
chr36225475462254845+CDS,intron-Proximal3.776504.93978HepG2BCLAF1
chr36198902261989121+CDS,intron-Proximal3.412705.58370HepG2PPIG
chr36211827462118341+CDS,intron-Proximal3.895155.73400HepG2PPIG
chr36197543661975481+CDS,intron-Proximal4.316383.82843HepG2PPIG
chr36225947662259544+CDS,intron-Proximal5.8022311.46503HepG2PRPF8
chr36226722062267408+CDS,intron-Proximal3.336907.66871HepG2BCLAF1
chr36211827362118343+CDS,intron-Proximal4.689646.50720HepG2LIN28B
chr36226332262263404+CDS,intron-Proximal3.763828.08346HepG2PRPF8
chr36206390162063960+CDS,intron-Proximal4.743035.68502HepG2PRPF8
chr36224084562240936+CDS,intron-Proximal4.440996.04280HepG2PRPF8
chr36218082262180888+CDS,intron-Proximal3.8818013.01942HepG2PRPF8
chr36162307561623107+intron-Distal4.597893.97018HepG2HNRNPM
chr36160722361607293+intron-Distal4.772565.84045HepG2PTBP1
chr36154837961548427+intron-Distal3.376767.96389HepG2CSTF2T
chr36154860261548624+intron-Distal3.7132010.16757HepG2CSTF2T
chr36159645661596526+intron-Distal3.065043.00914HepG2PTBP1
chr36175617261756308+intron-Distal3.577875.67571HepG2SFPQ
chr36162485661624916+intron-Distal4.030843.27946HepG2HNRNPM
chr36160105461601090+intron-Distal3.979905.95943HepG2HNRNPM
chr36187135061871427+intron-Distal6.4240918.51520HepG2DDX59
chr36158663961586706+intron-Distal3.631917.77861HepG2ILF3
chr36160010361600184+intron-Distal3.287166.66973HepG2HNRNPC
chr36175666961756767+intron-Distal3.596074.78196HepG2PTBP1
chr36155992161559989+intron-Distal5.7175712.96579HepG2HNRNPM
chr36159993561600072+intron-Distal5.6191322.72580HepG2QKI
chr36177594261775997+intron-Distal4.039483.27829HepG2MATR3
chr36161845961618532+intron-Distal4.379806.69976HepG2PCBP2
chr36162684461626932+intron-Distal4.2508710.68100HepG2PCBP2
chr36187136461871407+intron-Distal4.224713.58513HepG2GTF2F1
chr36154852661548579+intron-Distal3.243616.60744HepG2FAM120A
chr36191308261913162+intron-Distal5.7444811.86869HepG2HNRNPM
chr36225149862251662+intron-Distal4.002816.64740HepG2HNRNPL
chr36154857961548708+intron-Distal3.3601818.90953HepG2FAM120A
chr36174194861741991+intron-Distal3.305413.11000HepG2HNRNPM
chr36198162561981771+intron-Distal3.264593.59803HepG2PTBP1
chr36156656161566616+intron-Distal4.0533810.94220HepG2HNRNPM
chr36182545861825542+intron-Distal4.5177112.74229HepG2PCBP2
chr36156652761566561+intron-Distal3.716974.87260HepG2HNRNPM
chr36162328061623326+intron-Distal3.813895.28337HepG2HNRNPM
chr36191298461913046+intron-Distal3.562913.66782HepG2HNRNPM
chr36191229261912481+intron-Distal4.430909.60550HepG2QKI
chr36165557261655632+intron-Distal5.8593610.99895HepG2HNRNPM
chr36189664461896829+intron-Distal3.627124.23155HepG2MATR3
chr36156434561564420+intron-Distal3.788593.39169HepG2HNRNPU
chr36190679861906854+intron-Distal4.773555.57752HepG2PTBP1
chr36187134261871416+intron-Distal4.068008.65065HepG2ILF3
chr36188089561880911+intron-Distal7.0266660.85252HepG2HNRNPM
chr36186820461868254+intron-Distal4.242794.78128HepG2SUGP2
chr36178304061783100+intron-Distal3.388613.10946HepG2SFPQ
chr36157998061580046+intron-Distal3.265933.42785HepG2HNRNPM
chr36155020361550283+intron-Distal3.060643.11118HepG2PRPF4
chr36156902661569109+intron-Distal3.200423.73766HepG2SFPQ
chr36164146661641555+intron-Distal4.335104.24441HepG2ILF3
chr36184333461843395+intron-Distal3.735314.23286HepG2QKI
chr36181553761815598+intron-Distal3.716167.62866HepG2HNRNPM
chr36154858961548684+intron-Distal3.435448.18955HepG2NKRF
chr36159458361594588+intron-Distal5.251137.23521HepG2HNRNPM
chr36167165061671713+intron-Distal4.144093.30328HepG2SFPQ
chr36174119761741278+intron-Distal3.411323.81193HepG2QKI
chr36162263761622707+intron-Distal3.985843.79098HepG2SUGP2
chr36183470861834790+intron-Distal4.372585.00436HepG2CSTF2
chr36155022261550315+intron-Distal3.178425.09109HepG2GTF2F1
chr36185709561857140+intron-Distal4.069263.38413HepG2HNRNPC
chr36191227161912365+intron-Distal6.2517716.44511HepG2PCBP2
chr36188183861881939+intron-Distal5.6310511.88842HepG2PCBP2
chr36189672961896884+intron-Distal3.570304.32634HepG2PTBP1
chr36155804161558085+intron-Distal4.389893.86368HepG2HNRNPM
chr36158031261580418+intron-Distal3.838777.24726HepG2HNRNPM
chr36156827561568318+intron-Distal3.389893.42785HepG2HNRNPM
chr36165943161659544+intron-Distal3.253884.88869HepG2SFPQ
chr36163247061632561+intron-Distal4.0982214.10920HepG2QKI
chr36197412461974265+intron-Distal4.592615.20135HepG2QKI
chr36156902761569080+intron-Distal3.513644.73383HepG2HNRNPM
chr36155959961559677+intron-Distal3.542206.01218HepG2HNRNPM
chr36154881061548850+intron-Distal3.525856.36668HepG2CSTF2T
chr36158663861586653+intron-Distal3.323697.55580HepG2HNRNPC
chr36163480461634915+intron-Distal5.0431216.31311HepG2PCBP2
chr36173484261734963+intron-Distal3.154683.29213HepG2KHSRP
chr36187174561871777+intron-Distal4.238925.76537HepG2PCBP2
chr36187767361877744+intron-Distal3.421293.06005HepG2QKI
chr36154850161548587+intron-Distal5.4702310.26354HepG2SFPQ
chr36156889761568952+intron-Distal5.462959.68377HepG2HNRNPM
chr36191318261913260+intron-Distal4.861835.37406HepG2HNRNPM
chr36177566561775740+intron-Distal5.8215011.86869HepG2HNRNPM
chr36164525261645414+intron-Distal4.309664.12480HepG2HNRNPM
chr36182796561828012+intron-Distal3.937374.88448HepG2HNRNPL
chr36186854961868627+intron-Distal4.775015.59955HepG2SUGP2
chr36185563061855706+intron-Distal4.316034.33022HepG2HNRNPK
chr36183343461833500+intron-Distal4.2984411.49475HepG2CSTF2
chr36154858461548674+intron-Distal3.317926.45096HepG2PRPF4
chr36183568261835733+intron-Distal4.513904.97123HepG2PCBP2
chr36154815961548187+intron-Distal4.318175.16644HepG2FAM120A
chr36174228561742329+intron-Distal4.301123.62366HepG2HNRNPM
chr36156537661565467+intron-Distal3.366754.14896HepG2HNRNPM
chr36159540261595511+intron-Distal3.629564.73419HepG2ILF3
chr36154887061548909+intron-Distal4.432234.99324HepG2GTF2F1
chr36160707661607139+intron-Distal4.426324.85866HepG2QKI
chr36175054861750591+intron-Distal4.408634.66899HepG2HNRNPM
chr36155889361558966+intron-Distal3.219383.77382HepG2HNRNPM
chr36182614461826303+intron-Distal3.379203.73766HepG2SFPQ
chr36154849861548637+intron-Distal3.264374.74718HepG2GTF2F1
chr36187135761871417+intron-Distal3.370794.34707HepG2HNRNPK
chr36183271261832793+intron-Distal4.316134.48405HepG2CSTF2
chr36177841261778456+intron-Distal4.618495.84045HepG2PTBP1
chr36154814961548192+intron-Distal3.130606.20207HepG2CSTF2T
chr36177579861775850+intron-Distal3.596463.90822HepG2HNRNPM
chr36161887861618953+intron-Distal4.148703.34098HepG2HNRNPM
chr36182081861820885+intron-Distal3.072964.53269HepG2HNRNPM
chr36155784861557887+intron-Distal4.040153.60235HepG2HNRNPM
chr36187023261870323+intron-Distal4.221788.37039HepG2HNRNPM
chr36165547461655537+intron-Distal4.795744.90578HepG2HNRNPM
chr36154825761548323+intron-Distal4.651936.32182HepG2PRPF4
chr36161846161618520+intron-Distal3.454313.59783HepG2HNRNPK
chr36181563461815684+intron-Distal3.184903.11000HepG2HNRNPM
chr36154828161548327+intron-Distal3.773945.94137HepG2NKRF
chr36154996761550064+intron-Distal3.036235.42552HepG2SFPQ
chr36155930261559383+intron-Distal3.649127.63765HepG2HNRNPM
chr36177478661774832+intron-Distal3.656725.07626HepG2PTBP1
chr36154842761548472+intron-Distal3.653508.52590HepG2CSTF2T
chr36178256061782604+intron-Distal3.841364.09242HepG2QKI
chr36154827161548314+intron-Distal3.553555.45050HepG2CSTF2T
chr36155026961550321+intron-Distal4.131916.69328HepG2HNRNPUL1
chr36204717462047244+intron-Distal4.113524.05848HepG2QKI
chr36187943461879490+intron-Distal3.878413.27946HepG2HNRNPM
chr36162770561627766+intron-Distal4.386094.38558HepG2HNRNPM
chr36156548361565535+intron-Distal4.151344.87260HepG2HNRNPM
chr36183835861838466+intron-Distal4.870666.44072HepG2HNRNPM
chr36160109061601138+intron-Distal3.866756.01218HepG2HNRNPM
chr36156895261569008+intron-Distal3.870665.62053HepG2HNRNPM
chr36165842361658531+intron-Distal3.688865.63886HepG2FAM120A
chr36154829961548335+intron-Distal4.159083.58513HepG2GTF2F1
chr36158665361586706+intron-Distal3.267857.57316HepG2HNRNPC
chr36188091161880918+intron-Distal7.0355961.13902HepG2HNRNPM
chr36185524661855328+intron-Distal4.129587.71013HepG2PCBP2
chr36188091861880946+intron-Distal6.4798261.33196HepG2HNRNPM
chr36164358861643646+intron-Distal4.511867.17878HepG2HNRNPM
chr36159458861594610+intron-Distal5.312317.78465HepG2HNRNPM
chr36187134561871419+intron-Distal5.7987935.45403HepG2PCBP2
chr36156883861568897+intron-Distal4.313896.98528HepG2HNRNPM
chr36157528761575353+intron-Distal4.210064.36329HepG2PRPF4
chr36162310761623159+intron-Distal3.678146.58367HepG2HNRNPM
chr36185708161857095+intron-Distal3.939003.15106HepG2HNRNPC
chr36187465761874712+intron-Distal4.334683.27946HepG2HNRNPM
chr36154827661548366+intron-Distal3.7773311.28402HepG2FAM120A
chr36154830661548329+intron-Distal3.250433.23984HepG2HNRNPUL1
chr36202777062027892+intron-Distal3.715415.52268HepG2RBFOX2
chr36165470161654799+intron-Distal3.506823.84494HepG2QKI
chr36186784661867962+intron-Distal4.499735.58061HepG2SUGP2
chr36154862461548707+intron-Distal3.4978717.27041HepG2CSTF2T
chr36155051361550564+intron-Distal3.941183.34098HepG2HNRNPM
chr36154909361549212+intron-Distal3.976993.65412HepG2HNRNPK
chr36156213361562206+intron-Distal4.580614.66899HepG2HNRNPM
chr36185408061854145+intron-Distal4.269474.33022HepG2HNRNPK
chr36155976461559823+intron-Distal3.789588.59134HepG2HNRNPM
chr36188372661883778+intron-Distal4.224214.05620HepG2MATR3
chr36159643961596543+intron-Distal4.7100614.19637HepG2PCBP2
chr36154941761549491+intron-Distal3.014086.23903HepG2CSTF2T
chr36156177661561842+intron-Distal4.189933.60235HepG2HNRNPM
chr36154810261548145+intron-Proximal4.540153.60235HepG2HNRNPM
chr36154806461548102+intron-Proximal4.587864.12480HepG2HNRNPM
chr36154806361548140+intron-Proximal3.543397.16128HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PTPRG is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PTPRG is not available on ENCORE database.

  • 66 RBPs can affect the levels of PTPRG.  








The Knockdown/knockout RNA-Seq assay for PTPRG is not available on ENCORE database.





66 RBPs can affect the gene expression of PTPRG :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PTPRGENSG00000144724.141222.199801828.63350-0.581304.937104.25350HepG2AKAP1
PTPRGENSG00000144724.141928.686301622.699100.249102.877302.09590HepG2AKAP8L
PTPRGENSG00000144724.14647.672501245.91440-0.9439010.225908.36950HepG2BCCIP
PTPRGENSG00000144724.14802.357101082.64560-0.432202.642501.76190HepG2BCLAF1
PTPRGENSG00000144724.141885.509101463.158700.365803.278802.63350HepG2BOP1
PTPRGENSG00000144724.141892.959001614.765900.229203.004502.31760HepG2CKAP4
PTPRGENSG00000144724.141182.23120769.654700.619106.930705.34260HepG2CSTF2
PTPRGENSG00000144724.142114.653201566.711200.432606.872305.94590HepG2CELF1
PTPRGENSG00000144724.14820.214801310.16190-0.6757011.473409.37570HepG2DDX1
PTPRGENSG00000144724.14887.293501751.73330-0.9813014.2691012.96080HepG2DDX3X
PTPRGENSG00000144724.141076.135601419.35380-0.399403.464402.01590HepG2DDX47
PTPRGENSG00000144724.14649.812801224.97010-0.914709.798208.44730HepG2DDX55
PTPRGENSG00000144724.141194.913901504.67910-0.332501.908201.38630HepG2DDX6
PTPRGENSG00000144724.14729.328501239.08100-0.7646010.632608.86460HepG2DHX30
PTPRGENSG00000144724.141129.442001545.20500-0.452207.039406.05420HepG2DKC1
PTPRGENSG00000144724.14899.677401284.68840-0.513907.379706.27580HepG2DNAJC21
PTPRGENSG00000144724.14974.765201446.57990-0.569505.308904.50440HepG2EIF2S1
PTPRGENSG00000144724.141140.267901598.68690-0.487503.640102.90910HepG2EIF4A3
PTPRGENSG00000144724.142440.369101556.458000.648705.304804.37350HepG2EIF4B
PTPRGENSG00000144724.14950.101601218.01550-0.358403.054601.85850HepG2FASTKD2
PTPRGENSG00000144724.141244.475901541.96220-0.309203.896002.75160HepG2HDGF
PTPRGENSG00000144724.14607.03710981.06370-0.692604.826202.97390HepG2HNRNPA0
PTPRGENSG00000144724.14874.855301442.66820-0.721609.718108.48540HepG2HNRNPC
PTPRGENSG00000144724.141102.565301534.71980-0.477109.824908.63050HepG2HNRNPL
PTPRGENSG00000144724.14546.192801433.13020-1.3917052.0510049.69650HepG2HNRNPU
PTPRGENSG00000144724.142518.037701427.219100.819003.310602.23280HepG2IGF2BP3
PTPRGENSG00000144724.141030.345201463.89510-0.5067011.278209.90740HepG2ILF2
PTPRGENSG00000144724.14763.196301131.84640-0.568603.203701.76780HepG2ILF3
PTPRGENSG00000144724.14838.944501622.48390-0.9516012.0355010.78410HepG2MATR3
PTPRGENSG00000144724.14972.931401407.81260-0.533006.277805.10480HepG2MSI2
PTPRGENSG00000144724.141035.841101660.72090-0.681007.067306.07780HepG2NCBP2
PTPRGENSG00000144724.14832.290501670.58330-1.0052025.2805023.15400HepG2NOL12
PTPRGENSG00000144724.14456.101201061.03530-1.218008.983707.34300HepG2PABPC1
PTPRGENSG00000144724.14847.765801479.06510-0.802909.622908.29610HepG2PABPC4
PTPRGENSG00000144724.141012.494301278.23760-0.336203.556102.73080HepG2PPIL4
PTPRGENSG00000144724.14609.428501461.33870-1.2618042.0305039.77040HepG2PRPF4
PTPRGENSG00000144724.141409.81130945.089500.576905.664604.55330HepG2PRPF8
PTPRGENSG00000144724.14883.221701594.67700-0.8524013.3600012.18070HepG2PUF60
PTPRGENSG00000144724.142527.709001692.772100.5783017.8282016.59130HepG2PUM1
PTPRGENSG00000144724.141032.022501625.00110-0.6550011.2676010.13330HepG2QKI
PTPRGENSG00000144724.141072.503501988.66420-0.8908019.5540017.63570HepG2RBM15
PTPRGENSG00000144724.14907.213301491.61730-0.717405.242703.96540HepG2RPS10
PTPRGENSG00000144724.141056.668401431.25920-0.437803.314902.43910HepG2RPS2
PTPRGENSG00000144724.141351.17270934.901300.531204.400303.43390HepG2RRP9
PTPRGENSG00000144724.14861.138801276.26590-0.5676010.790809.64810HepG2SAFB2
PTPRGENSG00000144724.141552.809702046.90960-0.398601.938401.37170HepG2SF3A3
PTPRGENSG00000144724.14927.948701438.36510-0.632307.325106.22510HepG2SF3B1
PTPRGENSG00000144724.141794.108901528.948200.230602.755902.05560HepG2SLBP
PTPRGENSG00000144724.141298.778901488.34180-0.196602.192101.60870HepG2SMN1
PTPRGENSG00000144724.142068.924802396.74140-0.212202.729202.22950HepG2SRFBP1
PTPRGENSG00000144724.142275.811801630.549700.480909.972509.19950HepG2SRSF1
PTPRGENSG00000144724.141861.989301574.453800.241902.554801.94880HepG2SRSF5
PTPRGENSG00000144724.141240.014301528.28390-0.301603.790102.99470HepG2SRSF7
PTPRGENSG00000144724.141420.991602080.88330-0.5503012.6109011.67250HepG2SSB
PTPRGENSG00000144724.142103.875901790.636900.232502.860702.23070HepG2SUCLG1
PTPRGENSG00000144724.14873.113101629.70390-0.900404.879003.49240HepG2TBRG4
PTPRGENSG00000144724.14995.024901392.55430-0.484906.207005.51140HepG2TIAL1
PTPRGENSG00000144724.14517.64020797.06570-0.622704.505602.51130HepG2TROVE2
PTPRGENSG00000144724.141064.344701487.99930-0.483404.351303.57230HepG2U2AF1
PTPRGENSG00000144724.14651.235701116.76030-0.778105.559604.10110HepG2UPF2
PTPRGENSG00000144724.14615.556401043.62180-0.761604.970103.48570HepG2XPO5
PTPRGENSG00000144724.14751.966901200.43810-0.674806.416505.32740HepG2XRN2
PTPRGENSG00000144724.141257.924201442.19230-0.197202.052101.46040HepG2ZC3H8
PTPRGENSG00000144724.141384.101201996.47820-0.5285013.8885012.89740HepG2ZNF622
PTPRGENSG00000144724.142243.300601517.092600.564204.265702.62750HepG2ZRANB2
PTPRGENSG00000144724.140.000006.31030-99999.999991.912301.30730K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PTPRG is not available on ENCORE database.






No RBPs affect the alternative splcing events of PTPRG on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PTPRG is not avaliable on ENCORE database.