PIGN

General Information

Gene Name       : PIGN
Gene ID             : ENSG00000197563.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PIGN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PIGNENSG00000197563.107.106.796.95ENCSR000AEF
HepG2PIGNENSG00000197563.1011.7215.7913.75ENCSR985KAT
K562PIGNENSG00000197563.107.156.656.90ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PIGN is not avaliable on ENCORE database.



Proteins bound to RNA
  • PIGN RNA is bound by 11 proteins.  







eCLIP assay for PIGN is not avaliable on ENCORE database.





11 proteins are bound to PIGN RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr185971258459712651-3'-UTR,intron-Distal5.885067.00172K562PUM2
chr185981319159813259-3'-UTR,CDS,intron-Distal,intron-Proximal4.953166.91190HepG2PPIG
chr185982836359828436-3'-UTR,CDS,intron-Distal,intron-Proximal3.627857.89260HepG2BCLAF1
chr185981322359813259-3'-UTR,CDS,intron-Distal,intron-Proximal3.687843.27569HepG2BCLAF1
chr185982495759825041-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.8088810.35753HepG2BCLAF1
chr185981317959813219-3'-UTR,CDS,intron-Distal3.526883.87469HepG2BCLAF1
chr185981420159814236-5'-UTR,CDS,intron-Distal,intron-Proximal4.270004.08604HepG2PPIG
chr185985413859854247-5'-UTR,intron-Distal,intron-Proximal3.523876.60989HepG2NCBP2
chr185985403259854125-5'-UTR,intron-Distal4.297846.23016HepG2PRPF8
chr185974200959742064-CDS,intron-Distal,intron-Proximal3.777343.16095HepG2U2AF2
chr185980621859806250-CDS,intron-Distal,intron-Proximal4.359824.34038HepG2BCLAF1
chr185982178859821841-CDS,intron-Distal,intron-Proximal4.273404.31023HepG2LIN28B
chr185982491759824957-CDS,intron-Distal,intron-Proximal3.259394.26492HepG2BCLAF1
chr185982186159821882-CDS,intron-Distal,intron-Proximal3.991343.06595HepG2BCLAF1
chr185983198259832138-intron-Distal6.8516226.20666HepG2QKI
chr185973300159733063-intron-Distal3.732045.57156HepG2QKI
chr185978622359786278-intron-Distal4.664736.84124HepG2SUGP2
chr185978627859786338-intron-Distal3.525975.06177HepG2SUGP2
chr185975339559753505-intron-Distal4.393083.92866K562PTBP1
chr185973663859736778-intron-Distal3.350564.10408K562KHSRP
chr185983199959832146-intron-Distal5.8490314.67956K562QKI
chr185975436659754469-intron-Distal4.693544.67693K562PTBP1
chr185978721659787290-intron-Distal3.465754.33009HepG2SUGP2
chr185973833859738468-intron-Distal3.906573.89294K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PIGN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PIGN is not available on ENCORE database.

  • 82 RBPs can affect the levels of PIGN.  








The Knockdown/knockout RNA-Seq assay for PIGN is not available on ENCORE database.





82 RBPs can affect the gene expression of PIGN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PIGNENSG00000197563.5549.78000704.39580-0.357503.341802.68360HepG2ACO1
PIGNENSG00000197563.5695.938101023.09620-0.555908.301207.21910HepG2AUH
PIGNENSG00000197563.5439.90020631.46510-0.521502.982602.00580HepG2BCCIP
PIGNENSG00000197563.5242.36840381.29620-0.653704.205903.48580HepG2BOP1
PIGNENSG00000197563.5532.29180859.61630-0.691502.801501.81940HepG2CCAR1
PIGNENSG00000197563.5522.90000704.24800-0.429504.713503.88940HepG2CKAP4
PIGNENSG00000197563.5532.55560665.49670-0.321502.369701.43110HepG2YBX3
PIGNENSG00000197563.5668.62350853.17630-0.351603.187202.50710HepG2CELF1
PIGNENSG00000197563.5724.76850917.37680-0.340003.851203.00000HepG2DAZAP1
PIGNENSG00000197563.5755.70800579.594300.382702.786501.86940HepG2DDX24
PIGNENSG00000197563.5517.97680653.51650-0.335302.525901.84950HepG2DNAJC21
PIGNENSG00000197563.5427.51870647.67520-0.599307.335006.34230HepG2DNAJC2
PIGNENSG00000197563.5584.23170860.68120-0.558903.991803.22770HepG2EIF4A3
PIGNENSG00000197563.5702.14380905.04610-0.366203.611902.67650HepG2EIF4G1
PIGNENSG00000197563.5590.27150805.55440-0.448602.837602.16440HepG2G3BP1
PIGNENSG00000197563.5480.16540730.11110-0.604604.293203.01860HepG2GNB2L1
PIGNENSG00000197563.5657.79890835.66090-0.345303.764102.98500HepG2HNRNPL
PIGNENSG00000197563.5303.36230407.39850-0.425402.319801.44780HepG2HNRNPM
PIGNENSG00000197563.5457.43640729.00590-0.672409.414408.34770HepG2HNRNPU
PIGNENSG00000197563.5359.53300744.65940-1.0505023.4068021.52540HepG2ILF2
PIGNENSG00000197563.5413.76240578.84590-0.484402.629501.47530HepG2KHDRBS1
PIGNENSG00000197563.5515.47870868.68000-0.752907.166906.12740HepG2MAGOH
PIGNENSG00000197563.5453.89030873.54420-0.944509.568508.45470HepG2MATR3
PIGNENSG00000197563.5308.10740486.20830-0.658102.618401.59320HepG2METAP2
PIGNENSG00000197563.5483.20720894.12300-0.887809.382408.25700HepG2NCBP2
PIGNENSG00000197563.5252.92040570.12490-1.172607.711605.87010HepG2NONO
PIGNENSG00000197563.5209.47620347.31250-0.729402.966601.32450HepG2PA2G4
PIGNENSG00000197563.5403.90370796.28350-0.9793010.964709.55500HepG2PABPC4
PIGNENSG00000197563.5489.26920721.62040-0.560604.470403.42380HepG2PARN
PIGNENSG00000197563.5462.24160650.21910-0.492304.762203.82150HepG2PPIL4
PIGNENSG00000197563.5521.15020868.35770-0.736608.673607.69530HepG2PUF60
PIGNENSG00000197563.5486.55640921.79910-0.9218021.1257019.79650HepG2PUM1
PIGNENSG00000197563.5701.13060921.12630-0.393703.445502.70010HepG2PUM2
PIGNENSG00000197563.5191.64910624.48090-1.7042015.0068013.48910HepG2RAVER1
PIGNENSG00000197563.5786.96570981.78630-0.319102.832602.30960HepG2RBM22
PIGNENSG00000197563.5521.66460862.29400-0.725106.085404.60800HepG2RBM27
PIGNENSG00000197563.5395.47900540.48050-0.450602.963002.25960HepG2RPLP0
PIGNENSG00000197563.5212.39470452.01180-1.0896011.7596010.59850HepG2RPS19
PIGNENSG00000197563.5411.62760795.31550-0.950209.710008.29030HepG2RPS2
PIGNENSG00000197563.5398.62730649.22580-0.703709.709208.61610HepG2SAFB2
PIGNENSG00000197563.5328.83360453.69100-0.464402.270401.41500HepG2SERBP1
PIGNENSG00000197563.5368.89330631.84140-0.776405.823204.82100HepG2SF3A3
PIGNENSG00000197563.5238.99630374.80940-0.649204.063403.22280HepG2SF3B1
PIGNENSG00000197563.5438.27910826.63000-0.9154016.1803014.93160HepG2SF3B4
PIGNENSG00000197563.5391.66250757.13030-0.9509019.3825017.91540HepG2SMN1
PIGNENSG00000197563.5597.17410417.042600.517902.339101.62330HepG2SNRNP70
PIGNENSG00000197563.5809.225301108.89440-0.454506.248105.57840HepG2SRFBP1
PIGNENSG00000197563.5586.10880857.37560-0.548807.098706.16020HepG2SRSF5
PIGNENSG00000197563.5524.60630701.89970-0.420003.490602.88640HepG2SRSF9
PIGNENSG00000197563.5385.73980530.58570-0.460002.369401.36300HepG2STIP1
PIGNENSG00000197563.5696.98150975.07320-0.484406.794405.89490HepG2SUCLG1
PIGNENSG00000197563.5318.40620501.05620-0.654102.412101.41380HepG2TBRG4
PIGNENSG00000197563.5354.81760708.45340-0.9976015.1596014.15500HepG2TIAL1
PIGNENSG00000197563.5437.78190714.69210-0.7071010.474409.48280HepG2TRIM56
PIGNENSG00000197563.5304.37460505.10690-0.730705.535704.66440HepG2U2AF1
PIGNENSG00000197563.5189.15720549.06190-1.537405.657004.20050HepG2U2AF2
PIGNENSG00000197563.5198.79020365.10320-0.877106.536105.35970HepG2UCHL5
PIGNENSG00000197563.5396.88150565.94310-0.511902.279301.37440HepG2UPF2
PIGNENSG00000197563.5377.86480540.99260-0.517704.450503.71980HepG2UTP3
PIGNENSG00000197563.5450.54470608.40940-0.433402.397501.71840HepG2XRN2
PIGNENSG00000197563.5225.48920400.43280-0.828508.686407.60670HepG2ZC3H8
PIGNENSG00000197563.5440.24330616.27400-0.485305.363604.66510HepG2ZNF622
PIGNENSG00000197563.5514.00190658.45230-0.357302.109601.53620K562AKAP8L
PIGNENSG00000197563.5425.64910919.57320-1.1113015.6381014.39740K562AQR
PIGNENSG00000197563.5132.41140212.94380-0.685403.221502.06440K562CCAR1
PIGNENSG00000197563.5284.38510471.08080-0.728105.314404.02600K562EFTUD2
PIGNENSG00000197563.5285.18000543.17130-0.9295010.072508.48900K562EIF4A3
PIGNENSG00000197563.5334.76970489.15710-0.547102.945501.74220K562EIF4B
PIGNENSG00000197563.5406.17860564.87560-0.475803.960603.25610K562FXR1
PIGNENSG00000197563.5196.81590309.67250-0.653903.825302.89850K562GPKOW
PIGNENSG00000197563.5548.71600776.46070-0.500903.792702.91250K562GRSF1
PIGNENSG00000197563.5237.62560404.78040-0.768405.795804.96300K562HNRNPC
PIGNENSG00000197563.5474.48590626.07850-0.400002.761201.70840K562HNRNPL
PIGNENSG00000197563.5250.15600349.43050-0.482202.179601.35670K562HNRNPM
PIGNENSG00000197563.5497.65230799.52080-0.684007.366505.96760K562MAGOH
PIGNENSG00000197563.5369.83210797.95440-1.1094014.4738012.26560K562MATR3
PIGNENSG00000197563.5212.50740302.27840-0.508402.547401.71120K562METAP2
PIGNENSG00000197563.5598.81850781.35690-0.383903.063701.63790K562PCBP1
PIGNENSG00000197563.5501.47330711.44220-0.504604.026802.84070K562PCBP2
PIGNENSG00000197563.5351.29060482.26970-0.457202.795901.96910K562PPIG
PIGNENSG00000197563.5306.89860458.41490-0.578903.429602.59270K562PRPF8
PIGNENSG00000197563.5225.62890362.92270-0.685703.791302.70880K562PSIP1
PIGNENSG00000197563.5597.94020776.75720-0.377502.988402.30080K562PTBP1
PIGNENSG00000197563.5689.592201085.47810-0.654506.941205.64570K562PUF60
PIGNENSG00000197563.5951.146301154.67830-0.279802.409701.41920K562PUM1
PIGNENSG00000197563.5498.07020745.01700-0.580905.283304.07800K562RBM22
PIGNENSG00000197563.5282.57920506.50190-0.841903.390401.64820K562RBM39
PIGNENSG00000197563.5439.29220549.06760-0.321802.014001.31100K562SF3A3
PIGNENSG00000197563.5205.18740294.53930-0.521502.238801.37430K562SF3B1
PIGNENSG00000197563.5388.70120588.97030-0.599505.664204.41320K562SF3B4
PIGNENSG00000197563.5318.26370508.48800-0.676003.611501.59350K562SMN1
PIGNENSG00000197563.5430.30770761.44010-0.823409.732408.41950K562SRSF1
PIGNENSG00000197563.5562.68620719.02130-0.353702.242401.31700K562SRSF5
PIGNENSG00000197563.5292.05800443.89140-0.604003.489902.33430K562SUPV3L1
PIGNENSG00000197563.5427.80870770.71540-0.849208.237606.93340K562TARDBP
PIGNENSG00000197563.5248.58710349.07400-0.489802.299201.45220K562TIAL1
PIGNENSG00000197563.5523.89110729.30580-0.477303.554302.28610K562TRA2A
PIGNENSG00000197563.5246.15650370.81720-0.591103.337602.27940K562TRIM56
PIGNENSG00000197563.5440.27730566.97290-0.364902.346301.60760K562U2AF2
PIGNENSG00000197563.5411.06580524.95880-0.352802.632801.80660K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PIGN is not available on ENCORE database.





11 RBPs can affect the splicing of PIGN :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPIGNENSG00000197563.5chr18-5973762259737739597125745971321259739905597399580.092000.001310.07373includedHepG2RBM22
SEPIGNENSG00000197563.5chr18-598243615982446059821798598218845982491959825041-0.261000.000320.00792excludedHepG2U2AF1
SEPIGNENSG00000197563.5chr18-5982948559829562598283655982861859854076598542460.415000.000180.02037includedHepG2TBRG4
SEPIGNENSG00000197563.5chr18-598243615982446059821798598218845982491959825041-0.198000.004910.05236excludedHepG2U2AF2
SEPIGNENSG00000197563.5chr18-5982948559829562598283655982861859854076598542460.382000.001530.07613includedHepG2NCBP2
SEPIGNENSG00000197563.5chr18-5983076359830889598283655982861859854076598542710.383000.001820.09151includedHepG2FTO
SEPIGNENSG00000197563.5chr18-598294855982956259828365598286185983076359830889-0.424000.001150.06540excludedHepG2FTO
SEPIGNENSG00000197563.5chr18-598243615982446059821798598218845982491959825041-0.290000.000600.01494excludedK562U2AF1
SEPIGNENSG00000197563.5chr18-5982948559829562598283655982861859830763598308890.349000.001290.08017includedHepG2HNRNPL
SEPIGNENSG00000197563.5chr18-598243615982446059821798598218845982491959825041-0.556000.000000.00000excludedK562U2AF2
SEPIGNENSG00000197563.5chr18-5982948559829562598283655982861859830763598308890.359000.002570.09123includedK562HNRNPK
SEPIGNENSG00000197563.5chr18-598307635983088959828365598286185985407659854271-0.259000.001170.04826excludedHepG2HNRNPU
SEPIGNENSG00000197563.5chr18-5982948559829562598283655982861859830763598308890.396000.000560.02502includedHepG2HNRNPC
SEPIGNENSG00000197563.5chr18-5977470059774819597742185977431859777066597773830.218000.007700.09634includedK562HNRNPC
A3SSPIGNENSG00000197563.5chr18-5977421859774336597742185977431859777066597772340.155000.005480.03132longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PIGN is not avaliable on ENCORE database.