PEX11B

General Information

Gene Name       : PEX11B
Gene ID             : ENSG00000131779.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PEX11B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PEX11BENSG00000131779.1026.6724.9025.79ENCSR000AEF
HepG2PEX11BENSG00000131779.1019.0821.8020.44ENCSR985KAT
K562PEX11BENSG00000131779.1017.7817.6917.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PEX11B is not avaliable on ENCORE database.



Proteins bound to RNA
  • PEX11B RNA is bound by 6 proteins.  







eCLIP assay for PEX11B is not avaliable on ENCORE database.





6 proteins are bound to PEX11B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1145523229145523269+3'-UTR,intron-Distal,intron-Proximal6.0972112.52551K562PTBP1
chr1145523143145523274+3'-UTR,intron-Distal,intron-Proximal4.449208.88160HepG2PTBP1
chr1145523177145523229+3'-UTR,intron-Distal5.017058.05592K562PTBP1
chr1145523598145523688+3'-UTR5.2229332.11803K562PUM2
chr1145523665145523709+3'-UTR5.4419210.27311K562PABPC4
chr1145523437145523496+3'-UTR4.518184.57427HepG2PCBP2
chr1145516389145516458+5'-UTR,CDS,intron-Proximal4.710778.39621K562DDX3X
chr1145518032145518091+CDS,intron-Proximal3.842334.52312K562AQR
chr1145517383145517432+CDS,intron-Proximal4.124753.59236HepG2AQR
chr1145517388145517513+intron-Distal,intron-Proximal5.9692111.25363K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PEX11B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PEX11B is not available on ENCORE database.

  • 67 RBPs can affect the levels of PEX11B.  








The Knockdown/knockout RNA-Seq assay for PEX11B is not available on ENCORE database.





67 RBPs can affect the gene expression of PEX11B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PEX11BENSG00000131779.6549.84860325.095600.758106.671005.08100HepG2AATF
PEX11BENSG00000131779.6633.35550422.999700.582306.972206.09540HepG2ACO1
PEX11BENSG00000131779.6273.89660372.93910-0.445302.239701.34180HepG2ADAR
PEX11BENSG00000131779.61598.53810542.953601.5578026.8516025.39350HepG2AKAP1
PEX11BENSG00000131779.6440.00210293.357100.584803.272802.14630HepG2AKAP8
PEX11BENSG00000131779.6669.16740449.248900.574804.166203.21080HepG2ASCC1
PEX11BENSG00000131779.6485.92540344.272400.497102.995401.53440HepG2ATP5C1
PEX11BENSG00000131779.6903.49590603.804700.581308.446707.35630HepG2AUH
PEX11BENSG00000131779.6516.16210330.113100.644803.887102.83810HepG2BCLAF1
PEX11BENSG00000131779.6415.90770238.656900.801206.313905.45110HepG2BOP1
PEX11BENSG00000131779.6396.84810285.864200.473202.511101.33760HepG2BUD13
PEX11BENSG00000131779.6576.41910426.817300.433402.495801.75680HepG2CIRBP
PEX11BENSG00000131779.6666.93060307.594701.116408.603807.27760HepG2CNOT7
PEX11BENSG00000131779.6483.22950332.755000.538102.647101.33540HepG2CSTF2T
PEX11BENSG00000131779.6540.00940391.197200.465004.649203.60560HepG2DDX19B
PEX11BENSG00000131779.6540.38190382.963000.496703.903602.54460HepG2DDX1
PEX11BENSG00000131779.61125.93070520.109301.1141015.3695014.01580HepG2DDX3X
PEX11BENSG00000131779.6633.78190373.557200.762605.262004.23630HepG2DDX55
PEX11BENSG00000131779.6691.64970446.782800.630404.359103.59810HepG2DDX6
PEX11BENSG00000131779.6497.09080372.252200.417103.662902.93200HepG2DNAJC2
PEX11BENSG00000131779.6472.15080330.345500.515202.583501.51870HepG2AGO1
PEX11BENSG00000131779.6635.36060474.654400.420602.252301.67380HepG2EIF4A3
PEX11BENSG00000131779.6330.35330238.542500.469702.721201.56440HepG2FAM120A
PEX11BENSG00000131779.6487.07040341.936100.510303.384502.13850HepG2FASTKD2
PEX11BENSG00000131779.6568.26300385.340000.560303.040902.23790HepG2FIP1L1
PEX11BENSG00000131779.6635.09530386.917800.714804.594803.18110HepG2FUS
PEX11BENSG00000131779.6555.41350406.072600.451702.941701.88970HepG2GNB2L1
PEX11BENSG00000131779.6613.90010403.821300.604207.304005.81060HepG2HDGF
PEX11BENSG00000131779.6232.94410379.10150-0.702604.520803.72170HepG2HNRNPA1
PEX11BENSG00000131779.6771.08200579.600400.411703.967302.88010HepG2HNRNPA2B1
PEX11BENSG00000131779.6412.66680521.77710-0.338502.087301.45210HepG2IGF2BP1
PEX11BENSG00000131779.6522.26780359.439700.538904.054602.08960HepG2CCAR2
PEX11BENSG00000131779.6582.92590397.765800.551304.358802.93210HepG2LARP7
PEX11BENSG00000131779.6436.67030279.357900.644302.783701.72900HepG2METAP2
PEX11BENSG00000131779.6720.62260493.100900.547303.762003.02760HepG2NCBP2
PEX11BENSG00000131779.6582.53550439.140200.407602.228801.57610HepG2PABPC4
PEX11BENSG00000131779.6534.28730407.815300.389602.748502.14300HepG2PCBP1
PEX11BENSG00000131779.6195.66800373.63240-0.933209.231907.93090HepG2PPIL4
PEX11BENSG00000131779.6320.70540247.474800.373902.035201.36490HepG2PRPF4
PEX11BENSG00000131779.6806.77890414.936600.9592016.7073015.58050HepG2PTBP1
PEX11BENSG00000131779.6412.11350633.24550-0.619706.001605.02640HepG2PUM2
PEX11BENSG00000131779.6595.26080430.847200.466204.586503.83160HepG2PUS1
PEX11BENSG00000131779.6713.25340449.452200.666107.040906.11060HepG2QKI
PEX11BENSG00000131779.6172.92490353.44880-1.031405.169504.22210HepG2RAVER1
PEX11BENSG00000131779.6734.16950419.807900.8063010.063608.57160HepG2RBM15
PEX11BENSG00000131779.6710.92590579.407100.295001.951301.49630HepG2RBM22
PEX11BENSG00000131779.6553.50540407.881900.440302.832102.15090HepG2RBM25
PEX11BENSG00000131779.6428.52850570.79050-0.413602.472001.82060HepG2RPLP0
PEX11BENSG00000131779.6462.26870285.012400.697604.146603.20660HepG2RRP9
PEX11BENSG00000131779.6534.46370432.057700.306801.795001.30170HepG2SF3B4
PEX11BENSG00000131779.6693.09130261.072001.408506.832005.59790HepG2SNRNP70
PEX11BENSG00000131779.6877.69120654.431000.423405.060604.44080HepG2SRFBP1
PEX11BENSG00000131779.6757.73980450.952200.748608.325307.60560HepG2SRSF1
PEX11BENSG00000131779.6159.10690230.99580-0.537902.147601.49690HepG2TARDBP
PEX11BENSG00000131779.6528.39440372.455100.504403.758802.79150HepG2TIA1
PEX11BENSG00000131779.6346.65480219.659500.658103.885202.98680HepG2UCHL5
PEX11BENSG00000131779.6460.23720327.438900.491103.633102.84870HepG2UPF1
PEX11BENSG00000131779.6459.21150336.548600.448203.326002.18970HepG2UTP18
PEX11BENSG00000131779.6509.68260347.583300.552102.509501.31710HepG2XRCC5
PEX11BENSG00000131779.6335.74770244.231400.459002.708602.04320HepG2ZC3H8
PEX11BENSG00000131779.6471.15630360.117700.387602.631802.09510HepG2ZNF622
PEX11BENSG00000131779.6396.15370530.49560-0.421302.221101.68580K562AQR
PEX11BENSG00000131779.6267.61430184.386500.537302.319001.52730K562BOP1
PEX11BENSG00000131779.6575.98600443.888300.375702.541401.42250K562CCDC124
PEX11BENSG00000131779.6574.60240741.85990-0.368602.543401.60880K562CELF1
PEX11BENSG00000131779.6242.42160327.76650-0.435202.397101.34360K562GLRX3
PEX11BENSG00000131779.6232.33500401.61150-0.789606.830405.19220K562HNRNPA1
PEX11BENSG00000131779.6508.79960383.304500.408502.186201.69210K562PUS1
PEX11BENSG00000131779.6439.38190250.797300.808905.462504.31200K562RPS19
PEX11BENSG00000131779.6270.21420361.24120-0.418902.751401.90710K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PEX11B is not available on ENCORE database.






No RBPs affect the alternative splcing events of PEX11B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PEX11B is not avaliable on ENCORE database.