PART1

General Information

Gene Name       : PART1
Gene ID             : ENSG00000152931.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PART1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PART1ENSG00000152931.70.000.010.01ENCSR000AEF
HepG2PART1ENSG00000152931.73.583.953.77ENCSR985KAT
K562PART1ENSG00000152931.70.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PART1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on PART1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for PART1 is not avaliable on ENCORE database.






NO known proteins are bound to PART1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for PART1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PART1 is not available on ENCORE database.

  • 75 RBPs can affect the levels of PART1.  








The Knockdown/knockout RNA-Seq assay for PART1 is not available on ENCORE database.





75 RBPs can affect the gene expression of PART1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PART1ENSG00000152931.7258.54380108.651301.250609.092707.29100HepG2AATF
PART1ENSG00000152931.751.71610212.20840-2.0368011.518909.81700HepG2ABCF1
PART1ENSG00000152931.7332.31840132.251101.3292015.9638014.75850HepG2ACO1
PART1ENSG00000152931.7322.90950119.018501.439807.525806.69300HepG2AKAP1
PART1ENSG00000152931.7255.9940098.478601.378109.856208.43320HepG2ASCC1
PART1ENSG00000152931.7426.56810243.519500.808604.954203.63500HepG2CCAR1
PART1ENSG00000152931.7161.2617093.561200.785302.990802.18720HepG2CIRBP
PART1ENSG00000152931.7582.07200132.254002.1378031.9076030.20650HepG2CKAP4
PART1ENSG00000152931.7222.70820119.175500.902003.747202.85030HepG2CNOT7
PART1ENSG00000152931.7189.57340111.249600.768902.992201.56550HepG2CSTF2T
PART1ENSG00000152931.795.00950207.20590-1.124908.018506.85490HepG2DAZAP1
PART1ENSG00000152931.740.07470119.86750-1.580707.357906.30500HepG2DDX21
PART1ENSG00000152931.7149.2661079.146300.915203.521101.94480HepG2DDX28
PART1ENSG00000152931.7256.98900104.465601.298607.666906.45830HepG2DDX55
PART1ENSG00000152931.7211.9405097.935201.113705.781904.91790HepG2DDX6
PART1ENSG00000152931.744.57820126.53670-1.505107.449306.43910HepG2DKC1
PART1ENSG00000152931.783.00810134.87530-0.700302.652101.96000HepG2DNAJC21
PART1ENSG00000152931.7223.16300133.689400.739104.830504.00770HepG2DNAJC2
PART1ENSG00000152931.758.61590137.28280-1.227804.864103.67340HepG2EEF2
PART1ENSG00000152931.7337.35770114.455401.5594015.0715012.60210HepG2EFTUD2
PART1ENSG00000152931.7179.22250111.448900.685302.614201.73310HepG2EIF3D
PART1ENSG00000152931.754.44360113.19980-1.056004.104502.81630HepG2EIF3G
PART1ENSG00000152931.7281.03540101.303801.472009.380808.15240HepG2EIF4B
PART1ENSG00000152931.7133.74770195.82870-0.550102.063301.35190HepG2EIF4G2
PART1ENSG00000152931.7172.6614095.755500.850403.675301.35420HepG2EXOSC5
PART1ENSG00000152931.7121.05990215.58910-0.832602.254601.34650HepG2FTO
PART1ENSG00000152931.7178.5616097.384100.874602.493201.85990HepG2G3BP1
PART1ENSG00000152931.755.1336099.23250-0.847902.640801.76660HepG2GEMIN5
PART1ENSG00000152931.780.10780140.16780-0.807102.783701.76220HepG2GNB2L1
PART1ENSG00000152931.765.80610243.96660-1.8904014.3303012.98310HepG2GPKOW
PART1ENSG00000152931.7294.41170137.306001.100305.741303.67840HepG2HLTF
PART1ENSG00000152931.750.72210136.16750-1.424706.325305.40710HepG2HNRNPA1
PART1ENSG00000152931.7283.35980190.432600.573303.525402.48910HepG2HNRNPA2B1
PART1ENSG00000152931.7255.13480151.462900.752203.798802.99730HepG2HNRNPC
PART1ENSG00000152931.7548.60690188.746001.5392032.0518030.06630HepG2HNRNPL
PART1ENSG00000152931.798.54280214.39790-1.121507.517606.37940HepG2IGF2BP1
PART1ENSG00000152931.7299.48990205.465500.543503.240702.41760HepG2NOL12
PART1ENSG00000152931.7309.52740148.928801.055309.930608.49060HepG2PARN
PART1ENSG00000152931.7213.62390123.360700.792104.675103.92060HepG2PCBP1
PART1ENSG00000152931.7256.03650135.534100.917604.751103.41630HepG2PCBP2
PART1ENSG00000152931.749.83480106.84540-1.100303.664901.91030HepG2PNPT1
PART1ENSG00000152931.7178.8901080.598901.150105.478404.38240HepG2PRPF8
PART1ENSG00000152931.7276.47780125.524501.139109.632808.73390HepG2PTBP1
PART1ENSG00000152931.7118.18920196.13730-0.730803.308402.66500HepG2PUF60
PART1ENSG00000152931.7130.79730208.05740-0.669603.090902.38130HepG2PUM2
PART1ENSG00000152931.7350.85250135.945301.367709.928308.84770HepG2QKI
PART1ENSG00000152931.7322.67960130.775301.302907.284406.17040HepG2RAVER1
PART1ENSG00000152931.7317.75190204.124900.638303.887902.89100HepG2RBM15
PART1ENSG00000152931.7114.17490280.87490-1.2987011.5711010.66470HepG2RBM22
PART1ENSG00000152931.7285.63360165.592600.786404.295303.04280HepG2RBM27
PART1ENSG00000152931.7406.30910133.510201.605505.824503.33010HepG2RBM39
PART1ENSG00000152931.763.02030139.69640-1.148405.067004.37150HepG2NELFE
PART1ENSG00000152931.798.43070234.54070-1.252708.772507.66420HepG2RPLP0
PART1ENSG00000152931.7407.4538079.730202.3533027.0437025.08380HepG2RRP9
PART1ENSG00000152931.7882.21060230.447001.9366040.5460038.26250HepG2SF3B1
PART1ENSG00000152931.7502.89630130.686501.9441034.8068033.13110HepG2SF3B4
PART1ENSG00000152931.7252.79830133.439100.921705.101003.77120HepG2SMNDC1
PART1ENSG00000152931.7285.71150130.988701.125003.228201.78990HepG2SNRNP200
PART1ENSG00000152931.7412.39910256.413000.685503.179002.33970HepG2SNRNP70
PART1ENSG00000152931.772.95840136.40870-0.902803.518903.00180HepG2SRSF1
PART1ENSG00000152931.7450.75320213.907601.0753014.3886013.01800HepG2SRSF7
PART1ENSG00000152931.7159.50130110.976000.523202.090301.59680HepG2SRSF9
PART1ENSG00000152931.712.65230275.41390-4.4441059.2291057.62020HepG2SSB
PART1ENSG00000152931.761.87310144.73930-1.226106.020304.66230HepG2SUPT6H
PART1ENSG00000152931.750.50180103.99740-1.042102.670902.00450HepG2SUPV3L1
PART1ENSG00000152931.761.98560185.08150-1.578206.852305.25710HepG2TBRG4
PART1ENSG00000152931.787.29210146.19490-0.744002.899002.38930HepG2TIAL1
PART1ENSG00000152931.785.89420183.33810-1.093904.913304.08940HepG2U2AF1
PART1ENSG00000152931.7409.30560152.700501.422404.570703.28450HepG2U2AF2
PART1ENSG00000152931.7106.4225061.436900.792502.559001.82930HepG2UCHL5
PART1ENSG00000152931.7393.38880164.197201.2604016.8251015.38810HepG2UPF1
PART1ENSG00000152931.7287.97440168.775300.770705.565404.12460HepG2UTP18
PART1ENSG00000152931.7356.51510158.526701.1691012.5215011.38810HepG2UTP3
PART1ENSG00000152931.751.94000107.06960-1.043603.642302.37790HepG2XPO5
PART1ENSG00000152931.797.92150180.58620-0.883005.188804.49900HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PART1 is not available on ENCORE database.





2 RBPs can affect the splicing of PART1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPART1ENSG00000152931.7chr5+597854875978553859783539597842505981684659822245-0.297000.003340.03836excludedHepG2U2AF2
SEPART1ENSG00000152931.7chr5+597854875978553859783539597842505981684659822245-0.548000.000270.03139excludedHepG2SRSF7

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PART1 is not avaliable on ENCORE database.