NR2C1

General Information

Gene Name       : NR2C1
Gene ID             : ENSG00000120798.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NR2C1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NR2C1ENSG00000120798.1634.2723.8829.08ENCSR000AEF
HepG2NR2C1ENSG00000120798.1621.0744.1832.62ENCSR985KAT
K562NR2C1ENSG00000120798.1625.7727.6226.70ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NR2C1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NR2C1 RNA is bound by 15 proteins.  







eCLIP assay for NR2C1 is not avaliable on ENCORE database.





15 proteins are bound to NR2C1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr129542517095425216-3'-UTR,CDS,intron-Distal,intron-Proximal3.028925.41277K562UCHL5
chr129542516995425217-3'-UTR,CDS,intron-Distal,intron-Proximal4.6334413.32408HepG2BCLAF1
chr129541603495416131-3'-UTR,CDS,intron-Distal,intron-Proximal4.829633.74454K562ZC3H11A
chr129546717195467257-5'-UTR,intron-Distal3.013734.63375HepG2GRWD1
chr129545164295451711-CDS,intron-Distal,intron-Proximal3.501247.42482K562KHSRP
chr129541897395419079-CDS,intron-Distal,intron-Proximal3.335205.24703K562BUD13
chr129546110695461128-CDS,intron-Distal,intron-Proximal4.176665.79432HepG2BCLAF1
chr129545627995456331-CDS,intron-Distal,intron-Proximal4.222854.15208K562RBM15
chr129542217595422253-CDS,intron-Distal,intron-Proximal3.565265.35682HepG2GRWD1
chr129545138495451470-CDS,intron-Distal,intron-Proximal3.7255210.83532K562EFTUD2
chr129544550195445570-CDS,intron-Distal,intron-Proximal4.754547.56654HepG2PRPF8
chr129545132895451415-CDS,intron-Distal,intron-Proximal4.4654413.35495HepG2PPIG
chr129544554295445585-CDS,intron-Distal4.438448.85766HepG2BCLAF1
chr129544549695445575-CDS,intron-Distal,intron-Proximal3.958625.64238K562PRPF8
chr129545647495456514-CDS,intron-Distal3.006973.50639HepG2PPIG
chr129545216795452218-CDS,intron-Distal,intron-Proximal3.7346811.46750HepG2BCLAF1
chr129541900895419081-CDS,intron-Distal,intron-Proximal4.173495.93727K562SF3B4
chr129545152295451544-CDS,intron-Distal,intron-Proximal3.692766.39464HepG2BCLAF1
chr129545132695451419-CDS,intron-Distal,intron-Proximal3.5349720.07066HepG2BCLAF1
chr129542212495422212-CDS,intron-Distal,intron-Proximal5.8084311.11361K562PRPF8
chr129545140295451469-CDS,intron-Distal,intron-Proximal4.744457.56947K562SF3B4
chr129544565495445719-CDS,intron-Distal,intron-Proximal3.497664.45064HepG2GRWD1
chr129545214495452167-CDS,intron-Distal,intron-Proximal4.1738413.42460HepG2BCLAF1
chr129545208395452140-CDS,intron-Distal,intron-Proximal3.167085.34405K562ZNF622
chr129544286195442897-CDS,intron-Distal,intron-Proximal5.059106.13315HepG2BCLAF1
chr129545151795451612-CDS,intron-Distal,intron-Proximal3.839573.65778K562GRWD1
chr129545160195451634-CDS,intron-Distal,intron-Proximal3.310056.19339HepG2BCLAF1
chr129545211695452195-CDS,intron-Distal,intron-Proximal4.794265.38533HepG2ZNF800
chr129545207495452144-CDS,intron-Distal,intron-Proximal3.5949111.74374HepG2BCLAF1
chr129545647295456515-CDS,intron-Distal,intron-Proximal4.067347.65975HepG2BCLAF1
chr129542217295422274-CDS,intron-Distal,intron-Proximal3.1877110.73945HepG2BCLAF1
chr129544565195445718-CDS,intron-Distal,intron-Proximal3.6798714.94623HepG2BCLAF1
chr129542208395422213-CDS,intron-Distal,intron-Proximal4.7172611.26073HepG2PRPF8
chr129545133095451359-CDS,intron-Distal4.983769.33883HepG2GRWD1
chr129545628295456321-CDS,intron-Distal,intron-Proximal3.173527.17439HepG2BCLAF1
chr129545150695451567-CDS,intron-Distal,intron-Proximal3.515936.70085HepG2PPIG
chr129543919295439306-intron-Distal4.297873.74583HepG2PTBP1
chr129545201495452062-intron-Distal,intron-Proximal4.144659.98400HepG2BCLAF1
chr129542205495422104-intron-Distal,intron-Proximal3.405173.54718K562PRPF8
chr129545122295451275-intron-Distal,intron-Proximal4.399075.85485K562KHSRP
chr129545171195451829-intron-Distal,intron-Proximal4.0272611.86374K562KHSRP
chr129545184695451911-intron-Distal4.093206.22064HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NR2C1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NR2C1 is not available on ENCORE database.

  • 53 RBPs can affect the levels of NR2C1.  








The Knockdown/knockout RNA-Seq assay for NR2C1 is not available on ENCORE database.





53 RBPs can affect the gene expression of NR2C1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NR2C1ENSG00000120798.12700.33640897.58750-0.358003.917803.21820HepG2ACO1
NR2C1ENSG00000120798.12727.57630901.86110-0.309802.852902.07540HepG2AKAP8L
NR2C1ENSG00000120798.12513.61400725.78540-0.498903.371902.50560HepG2ASCC1
NR2C1ENSG00000120798.12748.30030897.46040-0.262202.463401.82850HepG2CKAP4
NR2C1ENSG00000120798.12604.74490768.33520-0.345402.147201.53200HepG2CPSF6
NR2C1ENSG00000120798.12925.854001215.86960-0.393104.963704.14820HepG2CELF1
NR2C1ENSG00000120798.12673.42890830.17110-0.301903.053602.18070HepG2DDX19B
NR2C1ENSG00000120798.12614.19580759.76400-0.306901.874801.30450HepG2DDX21
NR2C1ENSG00000120798.12557.46190721.74420-0.372601.900401.37940HepG2DDX6
NR2C1ENSG00000120798.12690.30910858.76560-0.315002.749602.07410HepG2DKC1
NR2C1ENSG00000120798.121037.09010766.876800.435402.867602.21750HepG2EIF4A3
NR2C1ENSG00000120798.12963.207501235.59080-0.359302.567101.78110HepG2EIF4G2
NR2C1ENSG00000120798.12613.20290877.16370-0.516504.981403.86340HepG2EWSR1
NR2C1ENSG00000120798.12761.09780502.776500.598105.589704.48370HepG2FUBP3
NR2C1ENSG00000120798.12997.607201191.14770-0.255803.107702.39650HepG2HNRNPL
NR2C1ENSG00000120798.12571.27700762.12970-0.415804.455803.70220HepG2HNRNPU
NR2C1ENSG00000120798.121076.635901408.00560-0.387102.212901.47710HepG2LARP4
NR2C1ENSG00000120798.121039.311801296.56260-0.319103.292502.46200HepG2NOL12
NR2C1ENSG00000120798.12540.79040794.43660-0.554902.604101.74940HepG2PABPC1
NR2C1ENSG00000120798.12390.19310552.64250-0.502202.675601.88120HepG2PRPF8
NR2C1ENSG00000120798.12504.892401237.62660-1.2935027.8957026.27000HepG2PUF60
NR2C1ENSG00000120798.12885.558801313.72990-0.5690010.924709.91010HepG2PUM1
NR2C1ENSG00000120798.121074.029001312.81100-0.289602.671002.01220HepG2PUM2
NR2C1ENSG00000120798.12764.62670914.26100-0.257902.319901.74300HepG2PUS1
NR2C1ENSG00000120798.12969.19100780.565600.312202.470301.87430HepG2QKI
NR2C1ENSG00000120798.12899.62130708.417600.344602.549801.89940HepG2RBM25
NR2C1ENSG00000120798.121079.58000802.107400.428504.995704.30460HepG2NELFE
NR2C1ENSG00000120798.121147.73150747.061800.6194010.206409.13800HepG2RECQL
NR2C1ENSG00000120798.12896.131601260.51080-0.492203.074702.36370HepG2SF3A3
NR2C1ENSG00000120798.121205.52680783.229300.6221010.604409.81110HepG2SRSF1
NR2C1ENSG00000120798.12906.250301221.89760-0.431106.196705.31290HepG2SRSF5
NR2C1ENSG00000120798.12521.43030637.20190-0.289302.218701.71270HepG2SRSF9
NR2C1ENSG00000120798.121167.320601389.70130-0.251602.714102.09690HepG2SUCLG1
NR2C1ENSG00000120798.121234.80680704.007400.8105015.5357014.36860HepG2TAF15
NR2C1ENSG00000120798.12597.75900810.14030-0.438603.141402.37390HepG2TARDBP
NR2C1ENSG00000120798.12829.06410646.875900.357902.797801.95670HepG2TIA1
NR2C1ENSG00000120798.12566.11050747.17250-0.400404.043503.38770HepG2TRIM56
NR2C1ENSG00000120798.12625.65470907.22140-0.536104.210703.44400HepG2U2AF1
NR2C1ENSG00000120798.12590.738901057.83500-0.840502.315801.42250HepG2U2AF2
NR2C1ENSG00000120798.12660.46310421.234900.648805.677904.58260HepG2UCHL5
NR2C1ENSG00000120798.12907.055201117.87790-0.301503.368002.61030HepG2UPF1
NR2C1ENSG00000120798.12865.19760653.018200.405802.261101.36050HepG2UPF2
NR2C1ENSG00000120798.12913.338801229.45510-0.428807.114506.34240HepG2ZNF622
NR2C1ENSG00000120798.12887.384401148.94860-0.372702.508801.88400K562DDX47
NR2C1ENSG00000120798.12538.30690742.51620-0.464004.626403.72580K562EIF2S2
NR2C1ENSG00000120798.12474.17860703.50260-0.569106.219405.36610K562FXR1
NR2C1ENSG00000120798.121026.24660729.452600.492403.059102.30930K562G3BP2
NR2C1ENSG00000120798.12781.19170989.50420-0.341002.453901.74020K562GRSF1
NR2C1ENSG00000120798.121009.97230862.106300.228302.175601.50590K562NSUN2
NR2C1ENSG00000120798.12529.81880782.73270-0.563002.166301.31140K562PABPN1
NR2C1ENSG00000120798.12332.05500502.84660-0.598703.861902.97700K562PRPF8
NR2C1ENSG00000120798.12482.04420718.29270-0.575405.830704.89560K562PTBP1
NR2C1ENSG00000120798.121029.446201512.61140-0.555206.024204.82330K562PUF60
NR2C1ENSG00000120798.12547.29990724.94230-0.405502.687301.61230K562NELFE
NR2C1ENSG00000120798.12539.70190758.59500-0.491204.659103.53940K562SF3B4
NR2C1ENSG00000120798.12987.37410704.132300.487704.923403.98330K562SRSF1
NR2C1ENSG00000120798.12468.87620712.70120-0.604105.170904.18860K562TARDBP
NR2C1ENSG00000120798.12548.25020687.46150-0.326402.177801.45940K562TIA1
NR2C1ENSG00000120798.12966.19700782.173200.304702.232301.44680K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NR2C1 is not available on ENCORE database.





25 RBPs can affect the splicing of NR2C1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENR2C1ENSG00000120798.12chr12-954342519543437395425124954252649544284395443009-0.329000.000140.00399excludedK562SF3B4
SENR2C1ENSG00000120798.12chr12-954536819545376095452085954522659545628395456514-0.162000.001870.03466excludedK562SF3B4
SENR2C1ENSG00000120798.12chr12-954536819545376095452085954522659545628395456514-0.165000.000120.00328excludedHepG2U2AF1
SENR2C1ENSG00000120798.12chr12-954342519543437395425124954252649544284395443009-0.311000.000020.00088excludedHepG2HNRNPK
SENR2C1ENSG00000120798.12chr12-954566259545666395456283954565149546110695461146-0.114000.000160.00302excludedHepG2U2AF2
SENR2C1ENSG00000120798.12chr12-954189259541903195414004954161799542216295422285-0.130000.001080.01503excludedHepG2U2AF2
SENR2C1ENSG00000120798.12chr12-954536819545376095452085954522659545628395456514-0.209000.000000.00000excludedK562AQR
SENR2C1ENSG00000120798.12chr12-954342519543437395425124954252649544553795445603-0.228000.002680.02793excludedK562AQR
SENR2C1ENSG00000120798.12chr12-954566259545666395456283954565149546110695461146-0.105000.000150.01131excludedHepG2SFPQ
SENR2C1ENSG00000120798.12chr12-954342519543437395425124954252649544284395443009-0.428000.000010.00026excludedK562U2AF1
SENR2C1ENSG00000120798.12chr12-954342519543437395425124954252649544284395443009-0.216000.000130.01710excludedHepG2DDX6
SENR2C1ENSG00000120798.12chr12-954566259545666395456283954565149546110695461146-0.115000.000010.00387excludedHepG2HNRNPUL1
SENR2C1ENSG00000120798.12chr12-954536819545376095452085954522659545628395456514-0.203000.000000.00000excludedHepG2SF3A3
SENR2C1ENSG00000120798.12chr12-954342519543437395425124954252649544284395443009-0.183000.000220.06012excludedHepG2NOL12
SENR2C1ENSG00000120798.12chr12-954536819545376095452085954522659545628395456514-0.073000.000150.00809excludedK562UTP18
SENR2C1ENSG00000120798.12chr12-954251249542526495422162954223009544284395443268-0.265000.001430.02689excludedK562U2AF2
SENR2C1ENSG00000120798.12chr12-954536819545376095452085954522659545628395456514-0.060000.000960.02650excludedK562RBM15
SENR2C1ENSG00000120798.12chr12-954536819545376095452085954522659545628395456514-0.090000.000030.00145excludedK562AGGF1
SENR2C1ENSG00000120798.12chr12-954536819545376095452085954522659545628395456514-0.191000.000000.00048excludedK562SF3B1
SENR2C1ENSG00000120798.12chr12-954342519543437395425124954252649544284395443009-0.334000.000010.00085excludedK562HNRNPK
SENR2C1ENSG00000120798.12chr12-954342519543437395425124954252649544284395443009-0.179000.000430.05801excludedHepG2KHSRP
A3SSNR2C1ENSG00000120798.12chr12-9544284395443036954428439544300995445537954457190.093000.005480.03135longerK562AQR
RINR2C1ENSG00000120798.12chr12-954515069545226595451506954516549545208595452265-0.358000.000030.00442excludedHepG2SFPQ
RINR2C1ENSG00000120798.12chr12-9545150695452265954515069545165495452085954522650.237000.002220.06559includedHepG2TIA1
RINR2C1ENSG00000120798.12chr12-954515069545226595451506954516549545208595452265-0.178000.005970.09454excludedK562SRSF1
RINR2C1ENSG00000120798.12chr12-954515069545226595451506954516549545208595452265-0.215000.000980.08833excludedK562MATR3
RINR2C1ENSG00000120798.12chr12-9545150695452265954515069545165495452085954522650.356000.000030.00314includedK562HNRNPUL1
RINR2C1ENSG00000120798.12chr12-9545150695452265954515069545165495452085954522650.290000.000010.00032includedHepG2QKI
RINR2C1ENSG00000120798.12chr12-9545150695452265954515069545165495452085954522650.277000.000030.00068includedHepG2TAF15
RINR2C1ENSG00000120798.12chr12-9545150695452265954515069545165495452085954522650.302000.007380.06704includedHepG2HNRNPK
RINR2C1ENSG00000120798.12chr12-9545150695452265954515069545165495452085954522650.278000.000640.01842includedHepG2PTBP1
RINR2C1ENSG00000120798.12chr12-954515069545226595451506954516729545208595452265-0.183000.000570.00408excludedK562AQR
RINR2C1ENSG00000120798.12chr12-954515069545226595451506954516549545208595452265-0.262000.005680.07337excludedK562FXR1
MXENR2C1ENSG00000120798.12chr12-9542216295422300954342519543437395414004954161799544284395443009-0.189000.006450.086042includedHepG2U2AF1
MXENR2C1ENSG00000120798.12chr12-95418925954190319542512495425264954161099541617995442843954432680.128000.000790.075271includedHepG2KHSRP
MXENR2C1ENSG00000120798.12chr12-9541892595419031954221629542230095414004954161799542512495425264-0.228000.000010.000662includedK562RBM15
MXENR2C1ENSG00000120798.12chr12-95442843954430369544553795445744954251249542526495451328954514190.280000.007270.048961includedK562AQR
MXENR2C1ENSG00000120798.12chr12-95442843954430369544553795445603954251249542526495451328954514190.299000.008190.053861includedK562AQR
MXENR2C1ENSG00000120798.12chr12-95434251954343739544553795445744954251249542526495451328954514190.160000.000970.008931includedK562AQR
MXENR2C1ENSG00000120798.12chr12-95434251954343739544553795445603954251249542526495451328954514190.173000.001330.011671includedK562AQR
MXENR2C1ENSG00000120798.12chr12-95425124954252649544284395443036954221629542230095445537954457190.131000.001800.015181includedK562AQR
MXENR2C1ENSG00000120798.12chr12-9542216295422300954428439544300995414004954161799544553795445719-0.079000.010970.068232includedK562AQR
MXENR2C1ENSG00000120798.12chr12-9544284395443009954455379544571995422162954223009545132895451419-0.064000.003060.023832includedK562AQR
MXENR2C1ENSG00000120798.12chr12-9544284395443009954455379544571995414004954161799545132895451419-0.055000.017120.097152includedK562AQR
MXENR2C1ENSG00000120798.12chr12-9542512495425264954428439544300995418925954190319544553795445719-0.161000.000470.004742includedK562AQR
MXENR2C1ENSG00000120798.12chr12-9542512495425264954455379544571995414004954161799545132895451419-0.064000.000470.004712includedK562AQR
MXENR2C1ENSG00000120798.12chr12-9542512495425264954428439544300995414004954161799544553795445719-0.138000.000400.004122includedK562AQR
MXENR2C1ENSG00000120798.12chr12-9542216295422300954428439544300995418925954190319544553795445719-0.188000.002340.031342includedK562U2AF2
MXENR2C1ENSG00000120798.12chr12-9542216295422300954342519543437395414004954161799544284395443009-0.214000.003810.045722includedK562U2AF2
MXENR2C1ENSG00000120798.12chr12-9544284395443009954455379544571995422162954223009545132895451419-0.148000.001250.018712includedK562U2AF2
MXENR2C1ENSG00000120798.12chr12-9541892595419031954221629542230095414004954161799542512495425264-0.177000.003550.043162includedK562U2AF2
MXENR2C1ENSG00000120798.12chr12-9542512495425264954428439544300995422162954222859544553795445719-0.339000.000070.007692includedK562LARP7
MXENR2C1ENSG00000120798.12chr12-95425124954252649544284395443009954221629542230095445537954457190.157000.006310.056431includedHepG2SFPQ
MXENR2C1ENSG00000120798.12chr12-95422162954223009544284395443009954189259541903195445537954457190.134000.010930.057911includedHepG2U2AF2
MXENR2C1ENSG00000120798.12chr12-95418925954190319542216295422285954161099541617995425124954252640.160000.016340.079771includedHepG2U2AF2
MXENR2C1ENSG00000120798.12chr12-95418925954190319542216295422285954156689541617995442843954430090.172000.002870.019501includedHepG2U2AF2
MXENR2C1ENSG00000120798.12chr12-95425124954252649544284395443009954221629542230095445537954457190.188000.002100.015201includedHepG2U2AF2
MXENR2C1ENSG00000120798.12chr12-9542216295422300954251249542526495418925954190319543425195434373-0.212000.001220.031552includedHepG2HNRNPK
MXENR2C1ENSG00000120798.12chr12-9542512495425264954428439544300995422162954222859544553795445719-0.145000.001470.053222includedHepG2HNRNPL
MXENR2C1ENSG00000120798.12chr12-95418925954190319542216295422300954140049541617995425124954252640.334000.000080.005011includedK562DHX30
MXENR2C1ENSG00000120798.12chr12-95418925954190319542512495425264954161099541617995442843954432680.145000.000430.030691includedHepG2DDX6

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NR2C1 is not avaliable on ENCORE database.