MMP17

General Information

Gene Name       : MMP17
Gene ID             : ENSG00000198598.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MMP17)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MMP17ENSG00000198598.60.000.000.00ENCSR000AEF
HepG2MMP17ENSG00000198598.61.060.050.56ENCSR985KAT
K562MMP17ENSG00000198598.68.403.345.87ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MMP17 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MMP17 RNA is bound by 19 proteins.  







eCLIP assay for MMP17 is not avaliable on ENCORE database.





19 proteins are bound to MMP17 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12132335691132335835+3'-UTR,CDS3.284037.78505K562DDX55
chr12132329589132329677+5'-UTR,CDS,intron-Proximal4.6171615.72959K562SF3B4
chr12132329985132329997+5'-UTR,CDS,intron-Proximal3.705204.48038K562PRPF8
chr12132313089132313168+5'-UTR,CDS4.231993.58587K562GEMIN5
chr12132325398132325467+CDS,intron-Proximal3.936595.70278K562AQR
chr12132328621132328645+CDS,intron-Proximal4.623633.62536K562AQR
chr12132317151132317243+intron-Distal3.208865.72015K562TIA1
chr12132315477132315522+intron-Distal3.337573.74491K562CSTF2T
chr12132317919132318017+intron-Distal3.753087.28984K562EWSR1
chr12132316062132316096+intron-Distal4.335774.75311K562CSTF2T
chr12132314170132314219+intron-Distal3.522663.99385K562CSTF2T
chr12132332426132332497+intron-Distal3.322583.19579K562HNRNPK
chr12132315344132315386+intron-Distal4.568763.86024K562EWSR1
chr12132316899132317008+intron-Distal3.998416.47320K562FTO
chr12132315909132315981+intron-Distal4.672017.89398K562FAM120A
chr12132317982132318058+intron-Distal3.347736.44478K562TIA1
chr12132314614132314707+intron-Distal5.446209.60017K562EWSR1
chr12132315902132315997+intron-Distal5.520868.80198K562GTF2F1
chr12132315915132315988+intron-Distal3.507375.10573K562FTO
chr12132314669132314722+intron-Distal4.616943.20137K562DDX52
chr12132315594132315653+intron-Distal4.590115.94830K562TIA1
chr12132316863132316987+intron-Distal3.721454.77857K562AKAP8L
chr12132314278132314334+intron-Distal5.169576.12846K562EWSR1
chr12132315725132315795+intron-Distal5.077718.59041K562CSTF2T
chr12132317540132317606+intron-Distal3.169565.62058K562CSTF2T
chr12132316914132316998+intron-Distal4.993914.36078K562GTF2F1
chr12132315925132315982+intron-Distal3.369825.47630K562TIA1
chr12132316154132316226+intron-Distal4.157063.82910K562NONO
chr12132314256132314326+intron-Distal3.498413.59569K562FTO
chr12132315273132315344+intron-Distal4.809673.36882K562SLTM
chr12132320149132320193+intron-Distal3.105603.62708K562CSTF2T
chr12132317787132317860+intron-Distal3.021615.95781K562CSTF2T
chr12132315907132315986+intron-Distal4.8182715.28097K562CSTF2T
chr12132329016132329082+intron-Distal,intron-Proximal4.470123.73926K562RBM15
chr12132318695132318739+intron-Distal3.442304.76898K562CSTF2T
chr12132315789132315854+intron-Distal3.366564.58795K562EWSR1
chr12132315801132315849+intron-Distal3.469094.50953K562CSTF2T
chr12132315276132315338+intron-Distal3.399004.87483K562CSTF2T
chr12132318360132318419+intron-Distal3.992755.27813K562EWSR1
chr12132313336132313456+intron-Distal4.340965.83966K562DROSHA
chr12132314264132314326+intron-Distal4.932097.92479K562CSTF2T
chr12132317200132317257+intron-Distal4.769546.36475K562CSTF2T
chr12132314687132314729+intron-Distal4.519164.75311K562CSTF2T
chr12132318227132318283+intron-Distal4.636144.14056K562EWSR1
chr12132315488132315508+intron-Distal4.062723.30336K562EWSR1
chr12132317925132318027+intron-Distal4.496739.24802K562CSTF2T
chr12132314300132314342+intron-Distal3.590113.11711K562FAM120A
chr12132317802132317851+intron-Distal3.130183.82735K562EWSR1
chr12132314160132314217+intron-Distal3.453253.77680K562TIA1
chr12132316928132316977+intron-Distal3.787573.62890K562FAM120A
chr12132314652132314701+intron-Distal4.136173.69238K562GTF2F1
chr12132313342132313384+intron-Distal4.641395.28165K562CSTF2T
chr12132313597132313691+intron-Distal4.202898.89436K562CSTF2T
chr12132317758132317845+intron-Distal4.852325.43367K562FTO
chr12132329111132329167+intron-Distal3.599114.51666K562RBM15
chr12132321751132321852+intron-Distal3.072815.12258K562CSTF2T
chr12132328907132329018+intron-Distal,intron-Proximal3.422064.00731K562UCHL5
chr12132316226132316298+intron-Distal4.370685.09405K562NONO
chr12132318017132318139+intron-Distal4.741649.72177K562EWSR1
chr12132313326132313480+intron-Distal3.840438.35027K562FAM120A
chr12132315131132315185+intron-Distal4.888765.55667K562EWSR1
chr12132315584132315632+intron-Distal3.909674.73842K562EWSR1
chr12132318027132318144+intron-Distal4.1214512.33599K562CSTF2T
chr12132316918132316994+intron-Distal5.6918014.66192K562CSTF2T
chr12132316946132317005+intron-Distal5.007635.27179K562EWSR1
chr12132315651132315704+intron-Distal4.764914.42197K562EWSR1
chr12132332389132332530+intron-Distal3.509453.38183K562NONO
chr12132315153132315227+intron-Distal3.746235.85006K562NONO
chr12132315899132315988+intron-Distal5.619177.56775K562EWSR1
chr12132329338132329409+intron-Distal3.456114.22460K562RBM15
chr12132315904132315974+intron-Distal4.123085.29754K562AKAP8L
chr12132315127132315197+intron-Distal5.153719.69896K562CSTF2T
chr12132316219132316293+intron-Distal5.053574.98766K562EWSR1
chr12132315901132316045+intron-Distal5.086017.73240K562NONO
chr12132330038132330154+intron-Distal,intron-Proximal3.120243.01464K562PRPF8
chr12132319634132319665+intron-Distal3.992743.43867K562CSTF2T
chr12132319851132319907+intron-Distal4.461545.81141K562CSTF2T
chr12132315215132315261+intron-Distal3.366893.10855K562FTO
chr12132329997132330013+intron-Proximal4.058505.47590K562PRPF8
chr12132328645132328705+intron-Proximal5.150676.22530K562AQR
chr12132330013132330038+intron-Proximal3.874265.23086K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MMP17 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MMP17 is not available on ENCORE database.

  • 53 RBPs can affect the levels of MMP17.  








The Knockdown/knockout RNA-Seq assay for MMP17 is not available on ENCORE database.





53 RBPs can affect the gene expression of MMP17 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MMP17ENSG00000198598.20.0000010.27210-99999.999992.618101.64720HepG2SRSF3
MMP17ENSG00000198598.212.570601.015203.630102.629502.13960HepG2TIAL1
MMP17ENSG00000198598.2305.66960204.793800.577703.760903.11760K562AGGF1
MMP17ENSG00000198598.2360.82110213.102900.759604.669603.81380K562AKAP8L
MMP17ENSG00000198598.2132.99940307.80660-1.210605.133204.37650K562AQR
MMP17ENSG00000198598.2350.73590223.606900.649305.239903.93710K562ATP5C1
MMP17ENSG00000198598.2205.4656084.011201.290109.207307.43510K562BCLAF1
MMP17ENSG00000198598.239.28360114.45710-1.542806.364105.03020K562BOP1
MMP17ENSG00000198598.2204.3283063.735001.6806012.4612010.02580K562CSTF2
MMP17ENSG00000198598.278.69550325.27460-2.047309.577308.45140K562DDX47
MMP17ENSG00000198598.231.45530184.79280-2.554506.334104.76340K562EIF3A
MMP17ENSG00000198598.2153.23430335.13810-1.129006.893105.60680K562EIF4A3
MMP17ENSG00000198598.253.05630104.96610-0.984303.037902.07560K562FTO
MMP17ENSG00000198598.237.30860348.52670-3.2237052.4968050.09000K562FXR1
MMP17ENSG00000198598.210.5051058.70350-2.482406.998405.76130K562G3BP2
MMP17ENSG00000198598.267.18490147.99200-1.139302.738002.14410K562HNRNPC
MMP17ENSG00000198598.219.0562085.56400-2.166707.422305.30990K562HNRNPK
MMP17ENSG00000198598.2149.66840294.00620-0.974102.468901.47680K562HNRNPL
MMP17ENSG00000198598.226.4783085.17600-1.685603.478702.42350K562HNRNPM
MMP17ENSG00000198598.2182.3511090.067101.017503.246202.32840K562MAGOH
MMP17ENSG00000198598.2226.45120349.47940-0.626003.244502.37060K562MTPAP
MMP17ENSG00000198598.2131.15310334.67820-1.351505.953504.16870K562NCBP2
MMP17ENSG00000198598.2132.7718063.638901.060902.832201.51930K562NONO
MMP17ENSG00000198598.262.07320235.94880-1.926406.996605.05400K562PABPC1
MMP17ENSG00000198598.261.31000179.14320-1.546909.077407.57580K562PCBP3
MMP17ENSG00000198598.2489.06280279.707400.806003.007101.38150K562PKM
MMP17ENSG00000198598.231.09570137.40650-2.1437013.3446011.65570K562POLR2G
MMP17ENSG00000198598.2213.29290117.557300.859404.051203.03430K562PPIG
MMP17ENSG00000198598.212.7172062.69040-2.301502.627101.89570K562PRPF8
MMP17ENSG00000198598.2214.14960132.716100.690202.807001.89520K562PSIP1
MMP17ENSG00000198598.2116.58490443.05820-1.926102.616001.82300K562PUF60
MMP17ENSG00000198598.2145.61580471.76670-1.695902.467301.46360K562PUM1
MMP17ENSG00000198598.233.65010122.44020-1.863409.054907.16140K562SAFB
MMP17ENSG00000198598.258.74310126.58560-1.107604.487002.62480K562SDAD1
MMP17ENSG00000198598.2164.03070383.18600-1.224107.529606.23630K562SF3A3
MMP17ENSG00000198598.252.92330110.51340-1.062203.386902.30880K562SF3B1
MMP17ENSG00000198598.284.40850228.66640-1.437806.112804.05460K562SNRNP200
MMP17ENSG00000198598.222.0526085.80460-1.960105.326904.35190K562SRSF1
MMP17ENSG00000198598.2150.1778085.593100.811002.832601.76520K562SRSF4
MMP17ENSG00000198598.2156.4946081.065500.948904.483303.09150K562SRSF5
MMP17ENSG00000198598.2144.23880229.46910-0.669802.956901.74590K562SRSF7
MMP17ENSG00000198598.289.55310280.55390-1.647506.669903.46940K562SUGP2
MMP17ENSG00000198598.297.60140273.54660-1.486806.744804.21170K562SUPT6H
MMP17ENSG00000198598.240.01150137.82570-1.7844010.303608.71590K562SYNCRIP
MMP17ENSG00000198598.2197.9274086.814201.188907.379306.16360K562TARDBP
MMP17ENSG00000198598.2184.0032083.748801.135506.585005.24220K562TIA1
MMP17ENSG00000198598.2155.2747082.243300.916802.490601.46700K562TRA2A
MMP17ENSG00000198598.2236.47180135.734800.800803.719502.59210K562TRIM56
MMP17ENSG00000198598.226.6004056.83690-1.095402.294401.31070K562U2AF1
MMP17ENSG00000198598.226.8923058.72170-1.126702.683801.89220K562U2AF2
MMP17ENSG00000198598.2166.82950411.66720-1.303109.833608.58400K562UPF1
MMP17ENSG00000198598.295.67310366.34490-1.9370013.3156011.62910K562WDR43
MMP17ENSG00000198598.2126.07380269.13210-1.094004.145202.01350K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MMP17 is not available on ENCORE database.






No RBPs affect the alternative splcing events of MMP17 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for MMP17 is not avaliable on ENCORE database.