LINC00115

General Information

Gene Name       : LINC00115
Gene ID             : ENSG00000225880.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LINC00115)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LINC00115ENSG00000225880.50.850.550.70ENCSR000AEF
HepG2LINC00115ENSG00000225880.53.501.202.35ENCSR985KAT
K562LINC00115ENSG00000225880.54.581.783.18ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LINC00115 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on LINC00115 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for LINC00115 is not avaliable on ENCORE database.






NO known proteins are bound to LINC00115 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for LINC00115 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LINC00115 is not available on ENCORE database.

  • 62 RBPs can affect the levels of LINC00115.  








The Knockdown/knockout RNA-Seq assay for LINC00115 is not available on ENCORE database.





62 RBPs can affect the gene expression of LINC00115 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LINC00115ENSG00000225880.430.0356072.39080-1.269103.983503.27890HepG2ACO1
LINC00115ENSG00000225880.410.6463060.42640-2.504806.332305.56450HepG2AKAP1
LINC00115ENSG00000225880.434.9126072.73930-1.059003.023702.22540HepG2AKAP8L
LINC00115ENSG00000225880.416.8363049.99840-1.570303.211602.36560HepG2ASCC1
LINC00115ENSG00000225880.437.4736069.23880-0.885702.063601.45420HepG2AUH
LINC00115ENSG00000225880.420.8172047.50170-1.190202.069001.39360HepG2CIRBP
LINC00115ENSG00000225880.418.6278051.13050-1.456702.746401.77180HepG2DDX59
LINC00115ENSG00000225880.444.0197079.50870-0.853002.301001.74390HepG2ETF1
LINC00115ENSG00000225880.469.0828027.602401.323403.623001.33290HepG2EXOSC5
LINC00115ENSG00000225880.449.77090100.05060-1.007402.527301.78770HepG2FIP1L1
LINC00115ENSG00000225880.422.0815049.44270-1.162902.227501.62760HepG2G3BP1
LINC00115ENSG00000225880.432.9199069.11860-1.070103.135002.09850HepG2HDGF
LINC00115ENSG00000225880.4151.6267050.060201.598708.053306.91170HepG2HNRNPK
LINC00115ENSG00000225880.423.9295053.61440-1.163802.103801.54950HepG2MATR3
LINC00115ENSG00000225880.4182.4489054.877901.7331010.398909.21160HepG2NCBP2
LINC00115ENSG00000225880.438.6784073.73620-0.930802.618302.01460HepG2PUS1
LINC00115ENSG00000225880.422.6645066.45180-1.551904.525503.90560HepG2RBM22
LINC00115ENSG00000225880.481.5663027.877601.548804.487103.20570HepG2RBM27
LINC00115ENSG00000225880.441.1590075.04990-0.866602.509502.02420HepG2SRFBP1
LINC00115ENSG00000225880.417.2707043.32900-1.327002.245101.67410HepG2SRSF5
LINC00115ENSG00000225880.460.7600030.570600.990902.259001.62370HepG2SRSF7
LINC00115ENSG00000225880.436.0565065.15250-0.853602.092301.63020HepG2SSB
LINC00115ENSG00000225880.427.8213075.05390-1.431703.592802.38220HepG2TBRG4
LINC00115ENSG00000225880.429.474709.819101.585702.317501.62180HepG2UCHL5
LINC00115ENSG00000225880.4105.8592047.196901.165303.668902.99550HepG2UTP3
LINC00115ENSG00000225880.484.89810153.47930-0.854203.409302.08270K562AARS
LINC00115ENSG00000225880.4879.70470339.797301.3722023.8400022.28720K562AGGF1
LINC00115ENSG00000225880.4551.99290373.465900.563602.215901.34660K562AKAP8
LINC00115ENSG00000225880.4801.86990353.594201.181204.449503.61450K562AKAP8L
LINC00115ENSG00000225880.4631.91870371.042600.768104.320703.15160K562ATP5C1
LINC00115ENSG00000225880.4286.26030172.972800.726703.312902.13840K562CCAR1
LINC00115ENSG00000225880.4160.7341097.226900.725102.292901.34870K562CSTF2
LINC00115ENSG00000225880.4352.00920220.725700.673304.831803.20480K562DDX21
LINC00115ENSG00000225880.4136.75990334.26420-1.289307.200106.21710K562DDX47
LINC00115ENSG00000225880.4303.41580193.668900.647603.726802.14200K562DHX30
LINC00115ENSG00000225880.434.4919079.00320-1.195703.328502.46010K562EIF3G
LINC00115ENSG00000225880.4105.21830157.60780-0.583002.073701.35920K562EIF4A3
LINC00115ENSG00000225880.4364.06630214.612500.762402.613101.38520K562EXOSC5
LINC00115ENSG00000225880.4136.90570212.94650-0.637302.645401.80960K562FMR1
LINC00115ENSG00000225880.450.77510163.90600-1.6907011.2046010.07330K562FXR1
LINC00115ENSG00000225880.4161.39230100.865000.678002.780901.34400K562G3BP1
LINC00115ENSG00000225880.463.03030107.46130-0.769702.194401.57570K562G3BP2
LINC00115ENSG00000225880.4855.51520392.537601.123906.904504.67490K562HNRNPA2B1
LINC00115ENSG00000225880.4199.35350302.12260-0.599802.737901.69050K562HNRNPL
LINC00115ENSG00000225880.4331.09820231.398200.516803.159402.20700K562HNRNPU
LINC00115ENSG00000225880.4132.35290200.27630-0.597602.381101.63970K562HSPD1
LINC00115ENSG00000225880.4738.03340375.182700.976007.081705.61520K562KIF1C
LINC00115ENSG00000225880.4232.29290149.762400.633202.947801.36550K562LSM11
LINC00115ENSG00000225880.4611.13000420.309000.539902.103201.32610K562MBNL1
LINC00115ENSG00000225880.4579.68990294.612300.976406.838105.22090K562NAA15
LINC00115ENSG00000225880.4574.55610314.022300.8715012.8296011.38490K562NSUN2
LINC00115ENSG00000225880.4251.01260165.311200.602502.751901.33980K562NUSAP1
LINC00115ENSG00000225880.41499.55610343.466502.1262012.9488010.27870K562PABPN1
LINC00115ENSG00000225880.4722.65820408.448800.823103.812302.00500K562PPP1R8
LINC00115ENSG00000225880.4228.39390150.475100.601902.380701.54870K562PSIP1
LINC00115ENSG00000225880.460.15340107.72490-0.840603.038102.34560K562PTBP1
LINC00115ENSG00000225880.4196.31790381.63660-0.959002.878402.04630K562PUF60
LINC00115ENSG00000225880.41654.08910350.527502.2383069.6305066.80990K562PUS1
LINC00115ENSG00000225880.4845.85270341.653001.3078010.721009.57670K562RBM15
LINC00115ENSG00000225880.428.1487084.87050-1.592204.993403.89340K562RPS19
LINC00115ENSG00000225880.4186.49120322.98780-0.792404.183502.92400K562RPS3
LINC00115ENSG00000225880.4745.43710360.709701.047105.508403.57550K562SNRNP200
LINC00115ENSG00000225880.4239.45480130.209500.878804.938103.44820K562SRFBP1
LINC00115ENSG00000225880.4163.6803099.748600.714402.930301.84520K562SRSF5
LINC00115ENSG00000225880.4357.19850196.969900.858708.018706.02910K562SRSF7
LINC00115ENSG00000225880.489.40290210.02980-1.232204.609503.54330K562SYNCRIP
LINC00115ENSG00000225880.4185.33720101.185400.873102.438801.42770K562TRA2A
LINC00115ENSG00000225880.4403.16060153.832801.389903.995102.81530K562TRIM56
LINC00115ENSG00000225880.4197.57200296.26690-0.584504.044503.03430K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LINC00115 is not available on ENCORE database.






No RBPs affect the alternative splcing events of LINC00115 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LINC00115 is not avaliable on ENCORE database.