KLHDC4

General Information

Gene Name       : KLHDC4
Gene ID             : ENSG00000104731.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KLHDC4)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KLHDC4ENSG00000104731.1316.2023.3419.77ENCSR000AEF
HepG2KLHDC4ENSG00000104731.1341.9128.4135.16ENCSR985KAT
K562KLHDC4ENSG00000104731.1335.0525.1230.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KLHDC4 is not avaliable on ENCORE database.



Proteins bound to RNA

  • KLHDC4 RNA is bound by 51 proteins.  







eCLIP assay for KLHDC4 is not avaliable on ENCORE database.





51 proteins are bound to KLHDC4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr168774809687748147-3'-UTR,CDS,intron-Distal,intron-Proximal3.418467.09278HepG2PPIG
chr168773213387732182-3'-UTR,intron-Distal4.791915.77100K562SLTM
chr168774310687743254-3'-UTR,CDS,intron-Distal3.509635.83654K562ZNF622
chr168774311487743183-3'-UTR,CDS,intron-Distal4.985496.96356K562UCHL5
chr168774503687745051-3'-UTR,CDS,intron-Distal,intron-Proximal3.267183.59112HepG2PPIG
chr168773238687732440-3'-UTR,intron-Distal4.966844.65049HepG2SLTM
chr168774187087741968-3'-UTR,CDS,intron-Distal,intron-Proximal3.736504.93376K562PRPF8
chr168773548787735533-3'-UTR,CDS,intron-Distal4.383437.32953HepG2SLTM
chr168776037687760478-3'-UTR,CDS,intron-Distal,intron-Proximal3.135623.41227K562UCHL5
chr168773589087735940-3'-UTR,CDS,intron-Distal,intron-Proximal4.273695.66214K562SLTM
chr168774161587741681-3'-UTR,intron-Distal5.176485.34688K562DDX24
chr168773589687735937-3'-UTR,CDS,intron-Distal,intron-Proximal3.401894.14880HepG2CSTF2T
chr168774320687743279-3'-UTR,CDS,intron-Distal,intron-Proximal3.339634.26492HepG2BCLAF1
chr168773525387735309-3'-UTR,CDS,intron-Distal,intron-Proximal3.469024.44021K562YWHAG
chr168776418887764255-3'-UTR,CDS,intron-Distal,intron-Proximal4.442374.88594K562U2AF2
chr168773331687733360-3'-UTR,intron-Distal4.374877.58490K562SLTM
chr168773331287733415-3'-UTR,intron-Distal4.607795.17150K562YWHAG
chr168773691487736983-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.702374.54081HepG2SLTM
chr168774804887748111-3'-UTR,CDS,intron-Distal,intron-Proximal3.650827.89388HepG2PRPF8
chr168774195887742067-3'-UTR,CDS,intron-Distal,intron-Proximal3.559626.43326K562UCHL5
chr168776415587764234-3'-UTR,CDS,intron-Distal,intron-Proximal4.153734.69071HepG2GRWD1
chr168773461187734645-3'-UTR,intron-Distal,intron-Proximal4.763124.73643HepG2DDX59
chr168776037087760468-3'-UTR,CDS,intron-Distal,intron-Proximal5.430968.85296HepG2PPIG
chr168774166687741720-3'-UTR,intron-Distal3.560865.81258K562AQR
chr168773461087734637-3'-UTR,intron-Distal3.937935.33662K562SLTM
chr168773461087734661-3'-UTR,intron-Distal,intron-Proximal4.239303.55849K562YWHAG
chr168773347787733540-3'-UTR,intron-Distal4.066563.83566K562YWHAG
chr168773332387733379-3'-UTR,intron-Distal3.831783.01428K562UCHL5
chr168773689387736950-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.885677.64085K562SLTM
chr168774311687743241-3'-UTR,CDS,intron-Distal4.365199.90757HepG2BUD13
chr168774195187742056-3'-UTR,CDS,intron-Distal,intron-Proximal3.761286.62597HepG2GRWD1
chr168774301287743080-3'-UTR,CDS,intron-Distal,intron-Proximal3.884415.52342HepG2PPIG
chr168773666287736785-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.080314.23295HepG2GRWD1
chr168774481687744879-3'-UTR,CDS,intron-Distal,intron-Proximal3.588727.10944HepG2PPIG
chr168773548687735549-3'-UTR,CDS,intron-Distal3.043056.20207HepG2CSTF2T
chr168774318387743257-3'-UTR,CDS,intron-Distal3.378335.17903K562UCHL5
chr168774483387744859-3'-UTR,CDS,intron-Distal,intron-Proximal4.293266.04280HepG2PRPF8
chr168779562687795647-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.283954.21282HepG2PPIG
chr168778879887788865-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.448786.54857HepG2PPIG
chr168773336087733414-3'-UTR,intron-Distal4.409648.41528K562SLTM
chr168773588987735941-3'-UTR,CDS,intron-Distal,intron-Proximal3.370855.11264HepG2SLTM
chr168773261687732655-3'-UTR,intron-Distal3.297883.31097K562SLTM
chr168776415987764247-3'-UTR,CDS,intron-Distal,intron-Proximal4.218427.55042HepG2PPIG
chr168773460187734659-3'-UTR,intron-Distal,intron-Proximal4.164103.70058K562CSTF2T
chr168778886887788917-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.477615.12776HepG2U2AF2
chr168773460387734649-3'-UTR,intron-Distal,intron-Proximal4.213964.07991K562ILF3
chr168779555087795656-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.9539310.05825HepG2GRWD1
chr168773695087737007-3'-UTR,5'-UTR,intron-Distal4.327967.63628K562SLTM
chr168778239887782459-5'-UTR,CDS,intron-Distal,intron-Proximal4.811915.40008K562SF3B4
chr168779943087799535-5'-UTR,CDS,intron-Distal,intron-Proximal4.396405.88953K562DDX3X
chr168779943387799535-5'-UTR,CDS,intron-Distal,intron-Proximal4.834788.32768HepG2GRWD1
chr168779937687799510-5'-UTR,CDS,intron-Distal,intron-Proximal3.679744.42173HepG2TRA2A
chr168778228187782322-5'-UTR,CDS,intron-Distal,intron-Proximal3.007523.17744HepG2GRWD1
chr168778230787782386-5'-UTR,CDS,intron-Distal,intron-Proximal3.892334.01646HepG2SRSF1
chr168778238287782417-5'-UTR,CDS,intron-Distal,intron-Proximal3.073674.94718HepG2PPIG
chr168778228387782345-5'-UTR,CDS,intron-Distal,intron-Proximal3.557455.58370HepG2PPIG
chr168779938887799505-5'-UTR,CDS,intron-Distal3.176835.40162K562TRA2A
chr168778241287782464-5'-UTR,CDS,intron-Distal,intron-Proximal3.289233.37120HepG2SF3B4
chr168779937287799433-CDS,intron-Distal3.753735.97027HepG2GRWD1
chr168779938187799399-CDS,intron-Distal3.911646.79537K562AQR
chr168779939587799438-CDS,intron-Distal3.496887.62764HepG2PPIG
chr168779936987799427-CDS,intron-Distal3.279193.24220HepG2SRSF1
chr168777328987773386-intron-Distal,intron-Proximal6.1947619.22721K562EIF4G2
chr168773611587736169-5'-UTR,CDS,intron-Distal5.398528.50927K562SLTM
chr168773919387739255-5'-UTR,intron-Distal4.680574.04504HepG2DROSHA
chr168774051087740576-intron-Distal4.1467523.13327HepG2RBFOX2
chr168773413687734225-3'-UTR,intron-Distal8.2818666.03546HepG2PCBP2
chr168774001187740059-intron-Distal4.2286818.54884HepG2RBFOX2
chr168774507887745146-intron-Distal,intron-Proximal3.761665.98968HepG2SF3B4
chr168773430787734393-3'-UTR,intron-Distal,intron-Proximal3.002314.11477HepG2HNRNPK
chr168773399787734136-3'-UTR,intron-Distal7.57889102.76149HepG2PCBP2
chr168777687987777012-intron-Distal3.300966.60564HepG2ILF3
chr168774192787741956-intron-Distal,intron-Proximal3.382207.02925K562AQR
chr168778009587780166-intron-Distal5.4490911.13888HepG2HNRNPM
chr168775712587757174-intron-Distal3.490694.08043K562HNRNPM
chr168777191387771978-intron-Distal4.389107.21727K562DDX52
chr168774008487740136-intron-Distal3.459684.94042K562NONO
chr168777191887771992-intron-Distal4.399298.71496K562EWSR1
chr168777303487773120-intron-Distal6.0865133.80894K562EIF4G2
chr168773948187739606-intron-Distal7.2846825.00072HepG2DROSHA
chr168778072887780801-intron-Distal4.366754.90578HepG2HNRNPM
chr168776942887769477-intron-Distal4.377934.23759K562NONO
chr168776837487768462-intron-Distal3.509864.62044K562HNRNPM
chr168774050487740584-intron-Distal3.509263.93602K562EWSR1
chr168773950387739600-intron-Distal6.6471178.10296HepG2RBFOX2
chr168778219287782230-intron-Distal,intron-Proximal4.504594.48994K562RBM15
chr168773163987731735-intron-Distal,intron-Proximal3.866693.05863HepG2CSTF2
chr168773950387739572-intron-Distal3.319035.21690HepG2HNRNPM
chr168773889287738995-5'-UTR,intron-Distal3.461513.31218HepG2DROSHA
chr168773765987737693-5'-UTR,intron-Distal3.871793.40229HepG2CSTF2T
chr168777414087774183-intron-Distal,intron-Proximal4.459685.66217K562NONO
chr168777165887771825-intron-Distal4.554646.28603K562FUS
chr168778191387781977-intron-Distal5.227658.66887K562HNRNPM
chr168778122687781258-intron-Distal3.252164.01575K562NONO
chr168773422587734288-3'-UTR,intron-Distal,intron-Proximal6.5751034.66046HepG2PCBP2
chr168779834187798436-intron-Distal4.066403.61897HepG2HNRNPC
chr168777889287778966-intron-Distal3.516738.16137K562EIF4G2
chr168777323187773277-intron-Distal,intron-Proximal4.448935.18738K562TARDBP
chr168775975187759822-intron-Distal4.247838.66215HepG2CSTF2T
chr168775455187754627-intron-Distal3.291563.00221HepG2CSTF2T
chr168777403887774174-intron-Distal,intron-Proximal4.951259.95168K562FUS
chr168777201587772167-intron-Distal4.7849022.56973K562CSTF2T
chr168779898787799068-intron-Distal,intron-Proximal4.378917.22463HepG2XRN2
chr168777902687779072-intron-Distal3.664105.61385K562EIF4G2
chr168773962087739668-intron-Distal4.158393.36882K562SLTM
chr168777407887774094-intron-Distal,intron-Proximal3.938393.37414K562CSTF2T
chr168777874887778866-intron-Distal3.880635.98771K562GTF2F1
chr168777410187774178-intron-Distal,intron-Proximal5.4143721.09358K562EIF4G2
chr168777328887773311-intron-Distal,intron-Proximal4.616943.17679K562DDX52
chr168776451587764639-intron-Distal,intron-Proximal3.012784.61304K562KHSRP
chr168773440587734459-3'-UTR,intron-Distal,intron-Proximal7.4506240.15083HepG2PCBP2
chr168777206287772163-intron-Distal3.519383.40635K562TAF15
chr168777366387773722-intron-Distal5.6224316.78191K562EIF4G2
chr168774046487740502-intron-Distal3.675183.87858HepG2DDX6
chr168776995587770045-intron-Distal3.423685.45871HepG2HNRNPM
chr168777401087774056-intron-Distal4.576835.40320K562NONO
chr168777210187772155-intron-Distal5.615258.17882K562FAM120A
chr168774047887740579-intron-Distal3.1760210.07222HepG2CSTF2T
chr168777187287771934-intron-Distal4.3352110.06641K562NONO
chr168777361487773663-intron-Distal6.0992810.49187K562EIF4G2
chr168777449487774543-intron-Distal3.509454.48585K562NONO
chr168777927787779342-intron-Distal4.168996.94650K562EIF4G2
chr168777658587776650-intron-Distal4.968966.09831K562HNRNPM
chr168777219887772235-intron-Distal4.359775.18111K562CSTF2T
chr168773404887734107-3'-UTR,intron-Distal4.3805318.49924HepG2CSTF2T
chr168774048487740573-intron-Distal4.045023.28264K562YWHAG
chr168775955487759640-intron-Distal4.324244.70436K562EWSR1
chr168775659687756704-intron-Distal3.816874.60046HepG2CSTF2T
chr168774054187740579-intron-Distal6.015636.19827HepG2DDX6
chr168777206187772159-intron-Distal3.445895.42697K562FUS
chr168777361787773746-intron-Distal3.106695.45071K562EWSR1
chr168775346687753547-intron-Distal4.598054.86859HepG2CSTF2T
chr168773997187740015-intron-Distal4.407865.13416HepG2DROSHA
chr168773768787737775-5'-UTR,intron-Distal3.228153.80158K562NONO
chr168773790087737959-5'-UTR,intron-Distal3.598473.32762HepG2DDX59
chr168777219087772242-intron-Distal4.232668.43456K562TARDBP
chr168777337287773462-intron-Distal3.081117.10871K562CSTF2T
chr168777329587773345-intron-Distal,intron-Proximal4.192617.48999K562NONO
chr168777993187779943-intron-Distal6.3170811.49593K562PTBP1
chr168777426287774440-intron-Distal,intron-Proximal3.603615.03073K562FUS
chr168779935587799381-intron-Distal4.498107.15298K562AQR
chr168777164287771719-intron-Distal3.036475.71762K562CSTF2T
chr168775185287751923-intron-Distal3.848025.16644HepG2FAM120A
chr168774479387744833-intron-Distal,intron-Proximal4.524177.56654HepG2PRPF8
chr168779897587799070-intron-Distal,intron-Proximal3.600333.76326HepG2RBFOX2
chr168773394387734043-3'-UTR,intron-Distal3.575838.92111K562SLTM
chr168777251687772559-intron-Distal6.042207.55693K562EIF4G2
chr168775972087759809-intron-Distal4.359904.07596K562GTF2F1
chr168777341387773460-intron-Distal3.630184.38648K562DDX52
chr168777843787778527-intron-Distal7.3657150.36113K562TARDBP
chr168777994387779962-intron-Distal5.073039.53330K562PTBP1
chr168774086087740932-intron-Distal3.5082812.19366HepG2RBFOX2
chr168773999187740011-intron-Distal5.5464619.92666HepG2RBFOX2
chr168773866287738709-5'-UTR,intron-Distal3.080563.27165HepG2RBFOX2
chr168775371787753787-intron-Distal3.190893.46580HepG2CSTF2T
chr168773915487739193-5'-UTR,intron-Distal4.464094.94796HepG2DROSHA
chr168773410787734152-3'-UTR,intron-Distal4.8460317.61906HepG2CSTF2T
chr168777328587773403-intron-Distal,intron-Proximal4.740515.97891K562FAM120A
chr168777339187773438-intron-Distal4.459685.66217K562NONO
chr168777391287774006-intron-Distal4.313475.73677K562FUS
chr168778006887780164-intron-Distal4.7839115.52235K562HNRNPM
chr168777207687772172-intron-Distal7.7937234.98178K562EIF4G2
chr168773972887739757-intron-Distal5.3578632.16806HepG2RBFOX2
chr168778985787789984-intron-Distal,intron-Proximal3.884436.70109K562PRPF8
chr168773951587739605-intron-Distal5.7430412.68988HepG2DDX6
chr168773435987734420-3'-UTR,intron-Distal,intron-Proximal3.388736.40673HepG2DDX59
chr168773531287735375-CDS,intron-Distal,intron-Proximal3.8698411.39279HepG2SLTM
chr168774086387740929-intron-Distal3.674835.44647HepG2DROSHA
chr168777188487771993-intron-Distal7.0756044.55553K562EIF4G2
chr168777411087774178-intron-Distal,intron-Proximal5.203797.43305K562AATF
chr168773496087734990-intron-Distal4.095595.65212HepG2SLTM
chr168777390387773973-intron-Distal4.5140616.27431K562EIF4G2
chr168776995987770020-intron-Distal5.279765.14653K562EIF4G2
chr168773970787739728-intron-Distal6.3045564.07847HepG2RBFOX2
chr168774079187740851-intron-Distal5.207507.01251HepG2DROSHA
chr168773423087734292-3'-UTR,intron-Distal,intron-Proximal3.939996.75634HepG2HNRNPK
chr168777207187772161-intron-Distal3.650157.20926K562EWSR1
chr168777989387779988-intron-Distal3.9453611.82585K562MATR3
chr168775445587754525-intron-Distal3.634126.51348HepG2CSTF2T
chr168779906887799131-intron-Distal4.852686.34163HepG2XRN2
chr168774007787740173-intron-Distal4.7767228.93644HepG2RBFOX2
chr168773406387734200-3'-UTR,intron-Distal4.5286117.37137HepG2DDX59
chr168779898087799057-intron-Distal,intron-Proximal5.3861610.45866HepG2NKRF
chr168777204387772160-intron-Distal5.1704020.12825K562TARDBP
chr168773618387736242-5'-UTR,intron-Distal4.527325.51981K562YWHAG
chr168777875987778811-intron-Distal3.337123.77567K562NONO
chr168777389187773953-intron-Distal3.591657.88956K562CSTF2T
chr168773109687731158-intron-Distal4.351334.09073K562SLTM
chr168777337087773422-intron-Distal4.418983.28464K562EWSR1
chr168773826587738328-5'-UTR,intron-Distal4.031675.80201HepG2DROSHA
chr168777430987774371-intron-Distal,intron-Proximal4.7769411.23742K562EIF4G2
chr168775461187754670-intron-Distal3.922673.30336K562EWSR1
chr168773952887739574-intron-Distal5.530216.22843K562DROSHA
chr168777390887773944-intron-Distal3.215143.93923K562DDX52
chr168774002987740058-intron-Distal3.254663.11108HepG2DROSHA
chr168777193287771981-intron-Distal4.766554.47773K562AATF
chr168773601687736063-CDS,intron-Distal,intron-Proximal3.678495.58187HepG2SLTM
chr168773468687734703-intron-Distal,intron-Proximal4.075234.10339HepG2CSTF2T
chr168777361187773757-intron-Distal3.549355.83933K562FUS
chr168777410087774172-intron-Distal,intron-Proximal4.152255.10007K562FAM120A
chr168773531087735359-CDS,intron-Distal,intron-Proximal4.373044.67377K562YWHAG
chr168773889787738969-5'-UTR,intron-Distal4.922713.11886K562DROSHA
chr168777989587779931-intron-Distal6.2650551.69545K562PTBP1
chr168778191287781984-intron-Distal3.590846.84977K562NONO
chr168776995287770031-intron-Distal3.8822011.54576K562NONO
chr168774001087740053-intron-Distal3.291563.27222HepG2CSTF2T
chr168777185087771918-intron-Distal4.740465.95343K562EWSR1
chr168777853287778602-intron-Distal5.5093622.59872K562TARDBP
chr168776612687766234-intron-Distal3.230953.51696K562KHSRP
chr168777513687775186-intron-Distal3.741945.99692K562HNRNPM
chr168773996187739990-intron-Distal5.5868020.20116HepG2RBFOX2
chr168773963887739734-intron-Distal4.312374.59504K562RBFOX2
chr168777389487773978-intron-Distal3.970963.38753K562FAM120A
chr168777875987778842-intron-Distal3.238045.87066K562CSTF2T
chr168777182787771872-intron-Distal3.014774.55320K562NONO
chr168776838487768500-intron-Distal3.657574.50192K562FAM120A
chr168774347087743595-intron-Distal3.957135.37374HepG2XPO5
chr168776996687770077-intron-Distal3.463053.01436K562CSTF2T
chr168775409787754159-intron-Distal3.139713.58549K562NONO
chr168775975387759824-intron-Distal5.7754010.50820HepG2FAM120A
chr168777002087770093-intron-Distal3.876504.31590K562EIF4G2
chr168773889087738994-5'-UTR,intron-Distal3.246856.72547HepG2RBFOX2
chr168777189587771986-intron-Distal5.1447816.84638K562CSTF2T
chr168773441087734495-3'-UTR,intron-Distal,intron-Proximal3.8733111.51633HepG2CSTF2T
chr168777945687779548-intron-Distal3.504939.32356K562NONO
chr168777193687772017-intron-Distal3.581303.14006K562TBRG4
chr168777225587772272-intron-Distal6.111258.53131K562EIF4G2
chr168777009087770176-intron-Distal4.325617.79138K562HNRNPM
chr168777290787772968-intron-Distal5.106099.71026K562TARDBP
chr168777291387772958-intron-Distal5.1834410.02297K562EIF4G2
chr168777188687772008-intron-Distal3.8548411.29679K562FAM120A
chr168775972587759800-intron-Distal3.919323.43867K562CSTF2T
chr168773960087739628-intron-Distal6.4970124.82752HepG2RBFOX2
chr168777405687774112-intron-Distal,intron-Proximal3.893106.09306K562NONO
chr168777984387779893-intron-Distal4.1542615.29220K562MATR3
chr168777984387779895-intron-Distal6.27585400.00000K562PTBP1
chr168773955487739596-intron-Distal3.054174.88713HepG2CSTF2T
chr168777153687771592-intron-Distal3.362444.25264K562NONO
chr168774087087740923-intron-Distal3.101723.30843K562SLTM
chr168777206587772142-intron-Distal3.248464.60967K562DDX52
chr168775390087753981-intron-Distal3.221463.14365K562NONO
chr168777181087771861-intron-Distal4.643165.80843K562CSTF2T
chr168778800587788078-intron-Distal4.288014.51309K562HNRNPM
chr168777844787778533-intron-Distal5.1884314.37366K562EIF4G2
chr168775954887759635-intron-Distal3.181153.61506K562NONO
chr168773405187734204-3'-UTR,intron-Distal4.470788.84550K562PCBP1
chr168777839587778437-intron-Distal4.970748.39033K562TARDBP
chr168773398587734048-3'-UTR,intron-Distal3.6450410.26241HepG2CSTF2T
chr168777349787773531-intron-Distal3.267563.99385K562CSTF2T
chr168774051887740570-intron-Distal4.307344.71003HepG2DROSHA
chr168773951487739587-intron-Distal4.044703.06537K562RBFOX2
chr168776958387769641-intron-Distal3.601897.60840K562NONO
chr168773377687733843-3'-UTR,intron-Distal4.054054.04290K562CSTF2T
chr168773985787739961-intron-Distal4.709268.17841HepG2DROSHA
chr168776971087769817-intron-Distal4.9409213.16564K562NONO
chr168773962487739679-intron-Distal4.825598.17841HepG2DROSHA
chr168773962887739672-intron-Distal6.0602833.25754HepG2RBFOX2
chr168774007787740140-intron-Distal4.475287.35108HepG2DROSHA
chr168773764687737701-5'-UTR,intron-Distal4.997425.32699K562SLTM
chr168777250887772561-intron-Distal4.414755.34770HepG2IGF2BP1
chr168777188487772015-intron-Distal6.9695436.11935K562TARDBP
chr168777327787773328-intron-Distal,intron-Proximal3.909933.08314K562TARDBP
chr168779905687799129-intron-Distal5.0490715.23988K562XRN2
chr168777338687773460-intron-Distal5.1810219.17723K562EIF4G2
chr168774047887740518-intron-Distal4.389886.90140HepG2DROSHA
chr168777328687773370-intron-Distal,intron-Proximal3.367443.85467K562EWSR1
chr168773984887739959-intron-Distal5.1991741.89504HepG2RBFOX2
chr168773964187739733-intron-Distal4.9537214.35921HepG2DDX6
chr168773967887739741-intron-Distal5.126197.71942K562DROSHA
chr168775539987755487-intron-Distal4.225933.98553K562NONO
chr168773432887734405-3'-UTR,intron-Distal,intron-Proximal7.0632954.06486HepG2PCBP2
chr168777188987771974-intron-Distal4.496134.27460K562HNRNPM
chr168773601187736073-CDS,intron-Distal,intron-Proximal5.472979.20003K562SLTM
chr168777190087771967-intron-Distal3.612265.54968K562GEMIN5
chr168773086487730932-intron-Distal3.358663.12654K562SLTM
chr168776840787768516-intron-Distal3.846274.75857K562RBFOX2
chr168773530687735381-CDS,intron-Distal,intron-Proximal5.0430420.96949K562SLTM
chr168773404587734158-3'-UTR,intron-Distal3.8625311.25091HepG2HNRNPK
chr168777219087772269-intron-Distal4.155633.31904K562IGF2BP1
chr168777996287780019-intron-Distal4.717788.75579K562PTBP1
chr168774788587748029-intron-Distal,intron-Proximal5.175355.16714HepG2EFTUD2
chr168774047187740566-intron-Distal4.105357.00469K562NONO
chr168773436487734441-3'-UTR,intron-Distal,intron-Proximal4.306255.43223K562PCBP1
chr168776805387768170-intron-Distal3.661426.01711K562CSTF2T
chr168777457287774663-intron-Distal,intron-Proximal3.838829.97692K562NONO
chr168777186687772013-intron-Distal3.847579.62007K562FUS
chr168778022087780279-intron-Distal5.142849.54707K562NONO
chr168773718487737270-5'-UTR,intron-Distal3.200865.13321HepG2RBFOX2
chr168777839087778447-intron-Distal4.818177.19397K562EIF4G2
chr168777302987773116-intron-Distal5.3651510.28730K562TARDBP
chr168776628887766407-intron-Distal4.565319.20594K562RBFOX2
chr168777192287772004-intron-Distal6.187208.08139K562PHF6
chr168777984887779892-intron-Distal5.0479916.67986HepG2PTBP1
chr168773397987734135-3'-UTR,intron-Distal3.5578911.39601K562ILF3
chr168777222487772255-intron-Distal7.5464327.43779K562EIF4G2
chr168773962687739673-intron-Distal3.033103.87436K562NONO
chr168777192387771992-intron-Distal5.3709814.84496K562DHX30
chr168777431587774359-intron-Distal,intron-Proximal3.924945.99425K562CSTF2T
chr168775973787759822-intron-Distal4.492753.86024K562EWSR1
chr168773620887736246-5'-UTR,intron-Distal3.819354.58695K562SLTM
chr168773975887739848-intron-Distal6.0410176.67215HepG2RBFOX2
chr168773975687739857-intron-Distal6.7971229.65176HepG2DROSHA
chr168778072387780814-intron-Distal4.294388.40323K562NONO
chr168776807287768170-intron-Distal3.169517.02766K562NONO
chr168777218187772224-intron-Distal6.3619023.16131K562EIF4G2
chr168774505487745139-intron-Distal,intron-Proximal4.283456.10653K562SF3B4
chr168777422787774254-intron-Distal4.640796.64314K562CSTF2T
chr168777409787774153-intron-Distal,intron-Proximal3.942353.63902HepG2CSTF2T
chr168773423987734291-3'-UTR,intron-Distal,intron-Proximal4.378098.54991HepG2CSTF2T
chr168778051587780557-intron-Distal4.377935.34533K562NONO
chr168777989287779959-intron-Distal6.3908722.19046HepG2PTBP1
chr168777001787770090-intron-Distal4.097186.77280K562HNRNPM
chr168773401987734063-3'-UTR,intron-Distal3.638937.20019HepG2DDX59
chr168774191487741927-intron-Distal,intron-Proximal3.992118.27931K562AQR
chr168777411387774177-intron-Distal,intron-Proximal4.975828.61093K562CSTF2T
chr168776323087763310-intron-Distal3.027303.99662HepG2XPO5
chr168777888187778958-intron-Distal3.052554.07903K562EWSR1
chr168777419887774301-intron-Distal,intron-Proximal3.953666.68220K562TARDBP
chr168777428887774342-intron-Distal,intron-Proximal3.560376.60059K562NONO
chr168773530687735382-CDS,intron-Distal,intron-Proximal3.992743.43867K562CSTF2T
chr168779008687790148-intron-Distal,intron-Proximal4.770965.31973HepG2SF3B4
chr168773423687734258-3'-UTR,intron-Distal4.812894.73643HepG2DDX59
chr168773890687738992-5'-UTR,intron-Distal3.438444.48585K562NONO
chr168773841787738474-5'-UTR,intron-Distal4.782056.34754HepG2RBFOX2
chr168779898587799056-intron-Distal,intron-Proximal5.6840811.47656K562XRN2
chr168776836587768516-intron-Distal4.4464115.83494K562NONO
chr168773400587734099-3'-UTR,intron-Distal3.820233.99385K562CSTF2T
chr168776994987770017-intron-Distal4.124936.77280K562HNRNPM
chr168776981887769901-intron-Distal4.1206412.60900K562NONO
chr168773530587735388-CDS,intron-Distal,intron-Proximal3.361838.06012HepG2RBFOX2
chr168778131387781370-intron-Distal,intron-Proximal3.829456.59396K562NONO
chr168775717487757215-intron-Distal4.092453.78162K562HNRNPM
chr168773967987739756-intron-Distal5.9572615.96230HepG2DROSHA
chr168779907087799129-intron-Distal4.269823.97974HepG2RBFOX2
chr168777393187774003-intron-Distal4.094418.18170K562NONO
chr168773435487734410-3'-UTR,intron-Distal,intron-Proximal4.502299.81366HepG2CSTF2T
chr168773470387734721-intron-Distal,intron-Proximal4.166084.61649HepG2CSTF2T
chr168773875487738837-5'-UTR,intron-Distal5.048296.37401HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KLHDC4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KLHDC4 is not available on ENCORE database.

  • 44 RBPs can affect the levels of KLHDC4.  








The Knockdown/knockout RNA-Seq assay for KLHDC4 is not available on ENCORE database.





44 RBPs can affect the gene expression of KLHDC4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KLHDC4ENSG00000104731.9614.85770419.664200.550903.209602.20020HepG2BCCIP
KLHDC4ENSG00000104731.9585.65650412.615000.505202.774902.00090HepG2DDX55
KLHDC4ENSG00000104731.91404.055001033.886400.441406.521705.66310HepG2ETF1
KLHDC4ENSG00000104731.9408.63810307.398400.410602.146701.44740HepG2FUBP3
KLHDC4ENSG00000104731.9633.73880435.818000.540103.599102.81650HepG2FXR1
KLHDC4ENSG00000104731.9760.21590409.528600.892309.718508.47640HepG2HNRNPK
KLHDC4ENSG00000104731.9373.61780501.49740-0.424702.197101.62970HepG2HNRNPLL
KLHDC4ENSG00000104731.9541.69750399.861600.437902.784901.83270HepG2HNRNPM
KLHDC4ENSG00000104731.9599.85340435.971100.460302.629801.99020HepG2MAGOH
KLHDC4ENSG00000104731.9347.27720511.41920-0.558402.388701.49470HepG2MTPAP
KLHDC4ENSG00000104731.9665.72880448.672400.569203.478702.77330HepG2NCBP2
KLHDC4ENSG00000104731.9528.01310411.900200.358202.560501.97070HepG2PCBP1
KLHDC4ENSG00000104731.9550.67850419.120000.393702.969802.40680HepG2PTBP1
KLHDC4ENSG00000104731.9794.63800604.494000.394504.682003.95290HepG2PUM1
KLHDC4ENSG00000104731.9616.56820466.443600.402503.024002.46260HepG2NELFE
KLHDC4ENSG00000104731.9565.44530434.422900.380202.779702.16160HepG2RECQL
KLHDC4ENSG00000104731.9528.57460674.85560-0.352502.105901.50020HepG2RPLP0
KLHDC4ENSG00000104731.9477.38320336.768500.503302.573901.31010HepG2SART3
KLHDC4ENSG00000104731.9775.38130557.294800.476402.481601.84350HepG2SF3A3
KLHDC4ENSG00000104731.9544.54000413.003500.398803.428702.72530HepG2SMN1
KLHDC4ENSG00000104731.9346.77920552.32210-0.671503.469402.58970HepG2SNRNP70
KLHDC4ENSG00000104731.9565.63750455.467700.312402.008801.58770HepG2SRSF1
KLHDC4ENSG00000104731.9501.34950615.51540-0.296002.036001.42860HepG2SRSF7
KLHDC4ENSG00000104731.9722.02470847.41360-0.231001.747901.31750HepG2SSB
KLHDC4ENSG00000104731.9825.75810639.425300.368803.905003.18870HepG2SUCLG1
KLHDC4ENSG00000104731.9387.60580242.648300.675604.475303.50940HepG2UCHL5
KLHDC4ENSG00000104731.9747.94310477.164700.648308.530907.57220HepG2UTP3
KLHDC4ENSG00000104731.9768.036201132.40930-0.560102.648902.07160K562AQR
KLHDC4ENSG00000104731.91163.53770958.892200.279002.782602.12920K562DDX47
KLHDC4ENSG00000104731.9565.97600314.617800.847009.595408.11140K562EIF3G
KLHDC4ENSG00000104731.9316.94210442.77770-0.482402.582101.49990K562FKBP4
KLHDC4ENSG00000104731.9337.21500447.23480-0.407402.120501.36760K562FMR1
KLHDC4ENSG00000104731.9727.07800451.314700.687908.703207.70280K562FXR1
KLHDC4ENSG00000104731.9116.96110250.66830-1.099806.443405.26340K562G3BP2
KLHDC4ENSG00000104731.9686.05170524.303100.387802.135101.32410K562HNRNPM
KLHDC4ENSG00000104731.9690.05710867.70180-0.330502.746501.85570K562HNRNPU
KLHDC4ENSG00000104731.9570.03770415.002700.457803.430602.48930K562MAGOH
KLHDC4ENSG00000104731.9707.59270862.08620-0.284902.809802.05760K562NSUN2
KLHDC4ENSG00000104731.9503.69650369.228600.447902.803401.81800K562PCBP2
KLHDC4ENSG00000104731.9663.85600403.209700.719208.197207.09580K562PTBP1
KLHDC4ENSG00000104731.9532.01320386.567100.460603.094802.20110K562RBM22
KLHDC4ENSG00000104731.9549.87090406.814800.434602.688201.61290K562NELFE
KLHDC4ENSG00000104731.9417.83810289.126500.531102.572901.61000K562RPS3
KLHDC4ENSG00000104731.9692.34950511.762400.435903.062501.92340K562SAFB
KLHDC4ENSG00000104731.9340.21910260.613200.384502.034101.30230K562SF3B4
KLHDC4ENSG00000104731.9533.20400395.292900.431702.899502.17870K562SRSF1
KLHDC4ENSG00000104731.9759.24750576.075700.398203.227002.33990K562SYNCRIP
KLHDC4ENSG00000104731.9746.07080400.034300.8991010.464908.94490K562TARDBP
KLHDC4ENSG00000104731.9183.87360250.91450-0.448502.094601.39640K562U2AF2
KLHDC4ENSG00000104731.9984.91890813.380600.276002.810701.95820K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KLHDC4 is not available on ENCORE database.





17 RBPs can affect the splicing of KLHDC4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEKLHDC4ENSG00000104731.9chr16-8779000487790083877887998778889887795554877956460.137000.007030.09899includedK562SRSF1
SEKLHDC4ENSG00000104731.9chr16-8779867187798946877955638779564687799397877995670.102000.000040.00125includedHepG2U2AF1
SEKLHDC4ENSG00000104731.9chr16-877900048779008387788799877888988779555487795646-0.345000.000000.00001excludedHepG2U2AF1
SEKLHDC4ENSG00000104731.9chr16-877415638774168187736926877370388774195587742154-0.558000.000000.00003excludedK562WDR43
SEKLHDC4ENSG00000104731.9chr16-8779867187798946877955638779564687799397877995670.187000.000000.00001includedHepG2U2AF2
SEKLHDC4ENSG00000104731.9chr16-877900048779008387788799877888988779555487795646-0.180000.002590.03110excludedHepG2U2AF2
SEKLHDC4ENSG00000104731.9chr16-877415638774168187736926877370388774195587742072-0.256000.001280.07107excludedHepG2FTO
SEKLHDC4ENSG00000104731.9chr16-877900048779008387788799877888988779555487795646-0.330000.000160.00495excludedK562U2AF1
SEKLHDC4ENSG00000104731.9chr16-877900048779008387788799877888988779555487795646-0.533000.000000.00000excludedK562U2AF2
SEKLHDC4ENSG00000104731.9chr16-877900048779008387788799877888988779555487795646-0.295000.000000.00019excludedK562HNRNPU
SEKLHDC4ENSG00000104731.9chr16-877900048779008387788799877888988779555487795646-0.099000.000700.03055excludedK562SF3B1
A3SSKLHDC4ENSG00000104731.9chr16-8774195587742130877419558774207287742870877432730.052000.000560.00416longerK562AQR
A3SSKLHDC4ENSG00000104731.9chr16-8774306887743306877430688774327387744840877450490.120000.000000.00001longerK562AQR
A5SSKLHDC4ENSG00000104731.9chr16-877900048779008387790027877900838778879987788898-0.383000.000160.01668shorterK562HNRNPC
A5SSKLHDC4ENSG00000104731.9chr16-8779000487790083877900278779008387788799877888980.319000.000820.06620longerK562RBM15
RIKLHDC4ENSG00000104731.9chr16-877887998779008387788799877888988779000487790083-0.199000.001310.07200excludedK562NONO
RIKLHDC4ENSG00000104731.9chr16-8778879987790083877887998778889887790027877900830.215000.000120.00108includedK562PUS1
RIKLHDC4ENSG00000104731.9chr16-877887998779008387788799877888988779002787790083-0.280000.000260.00970excludedK562HNRNPC
RIKLHDC4ENSG00000104731.9chr16-8778879987790083877887998778889887790004877900830.317000.001900.01551includedHepG2U2AF2
RIKLHDC4ENSG00000104731.9chr16-877887998779008387788799877888988779002787790083-0.172000.015820.08804excludedHepG2U2AF2
RIKLHDC4ENSG00000104731.9chr16-8778879987790083877887998778889887790004877900830.169000.004170.09776includedHepG2TIA1
RIKLHDC4ENSG00000104731.9chr16-8778879987790083877887998778889887790004877900830.264000.000050.00611includedHepG2SUPV3L1
RIKLHDC4ENSG00000104731.9chr16-8778879987790083877887998778889887790004877900830.234000.001600.07367includedHepG2HNRNPA1
RIKLHDC4ENSG00000104731.9chr16-8778879987790083877887998778889887790004877900830.206000.012290.09105includedK562AKAP8L
RIKLHDC4ENSG00000104731.9chr16-8778879987790083877887998778889887790027877900830.203000.000290.00436includedK562RBM15
MXEKLHDC4ENSG00000104731.9chr16-87764157877642508778879987788898877603708776053087795554877956460.206000.000630.013761includedK562U2AF1
MXEKLHDC4ENSG00000104731.9chr16-8776415787764250877822788778241587760370877605308778879987788898-0.119000.004050.074992includedK562PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for KLHDC4 is not avaliable on ENCORE database.