GEMIN6

General Information

Gene Name       : GEMIN6
Gene ID             : ENSG00000152147.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GEMIN6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GEMIN6ENSG00000152147.1016.1911.3113.75ENCSR000AEF
HepG2GEMIN6ENSG00000152147.1020.4232.6926.55ENCSR985KAT
K562GEMIN6ENSG00000152147.108.658.388.52ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GEMIN6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GEMIN6 RNA is bound by 3 proteins.  







eCLIP assay for GEMIN6 is not avaliable on ENCORE database.





3 proteins are bound to GEMIN6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr23900878539008838+3'-UTR,CDS3.902243.56019HepG2GRWD1
chr23900871139008915+3'-UTR,CDS4.321403.71613K562UCHL5
chr23900615339006239+CDS3.119344.26492HepG2BCLAF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GEMIN6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GEMIN6 is not available on ENCORE database.

  • 63 RBPs can affect the levels of GEMIN6.  








The Knockdown/knockout RNA-Seq assay for GEMIN6 is not available on ENCORE database.





63 RBPs can affect the gene expression of GEMIN6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GEMIN6ENSG00000152147.6916.14480660.328800.472302.930502.38490HepG2AKAP1
GEMIN6ENSG00000152147.6499.97140610.50800-0.288202.008301.40680HepG2AUH
GEMIN6ENSG00000152147.6249.20430356.29400-0.515702.266401.45350HepG2BCLAF1
GEMIN6ENSG00000152147.6337.72150623.64720-0.884908.551007.39920HepG2CPSF6
GEMIN6ENSG00000152147.6265.70580387.31730-0.543703.328202.58880HepG2DDX21
GEMIN6ENSG00000152147.6453.72830632.61780-0.479501.968301.43230HepG2DDX3X
GEMIN6ENSG00000152147.6424.80960708.19350-0.737303.912802.76090HepG2DDX59
GEMIN6ENSG00000152147.6313.12010543.26040-0.794904.270503.51640HepG2DDX6
GEMIN6ENSG00000152147.6279.14770368.47620-0.400502.353701.69870HepG2DNAJC21
GEMIN6ENSG00000152147.6260.52400365.22460-0.487403.674102.94210HepG2DNAJC2
GEMIN6ENSG00000152147.6256.00610522.41950-1.029005.751704.91560HepG2EIF2S1
GEMIN6ENSG00000152147.6353.98960562.03970-0.667003.205202.46740HepG2EIF4B
GEMIN6ENSG00000152147.6468.44020700.95280-0.581506.906606.02850HepG2ETF1
GEMIN6ENSG00000152147.6457.87190330.332800.470903.095702.21480HepG2EWSR1
GEMIN6ENSG00000152147.6359.25630540.33750-0.588802.553101.91260HepG2G3BP1
GEMIN6ENSG00000152147.6268.45370372.00630-0.470702.478501.86440HepG2HNRNPA1
GEMIN6ENSG00000152147.6297.58140413.78900-0.475602.568501.89830HepG2HNRNPC
GEMIN6ENSG00000152147.6360.00620517.18140-0.522604.884603.96570HepG2HNRNPF
GEMIN6ENSG00000152147.6393.60380674.68460-0.777506.915305.97090HepG2HNRNPLL
GEMIN6ENSG00000152147.6355.62040509.27380-0.518104.085203.22010HepG2IGF2BP1
GEMIN6ENSG00000152147.6364.27910549.28780-0.592502.520701.87330HepG2IGF2BP2
GEMIN6ENSG00000152147.6539.48020728.93470-0.434202.308101.55520HepG2LARP4
GEMIN6ENSG00000152147.6803.88780585.844000.456402.224701.65550HepG2MATR3
GEMIN6ENSG00000152147.6423.17490599.67680-0.502902.190201.62460HepG2NCBP2
GEMIN6ENSG00000152147.6462.79700612.34200-0.404003.603502.93050HepG2PCBP1
GEMIN6ENSG00000152147.6374.12280623.04850-0.735808.752207.89020HepG2PTBP1
GEMIN6ENSG00000152147.6438.65270588.44900-0.423802.692002.10300HepG2PUF60
GEMIN6ENSG00000152147.6475.20180624.21680-0.393502.648901.99270HepG2PUM2
GEMIN6ENSG00000152147.6393.07040674.84590-0.779809.543008.48330HepG2QKI
GEMIN6ENSG00000152147.6338.10960612.44000-0.857107.268806.21950HepG2RBM25
GEMIN6ENSG00000152147.6453.19690693.42010-0.613607.130206.33130HepG2NELFE
GEMIN6ENSG00000152147.6462.16870645.77770-0.482604.718303.94250HepG2RECQL
GEMIN6ENSG00000152147.6422.32290648.73200-0.619307.125206.24700HepG2SF3B4
GEMIN6ENSG00000152147.6424.39740564.27700-0.411003.378402.61610HepG2SLBP
GEMIN6ENSG00000152147.6457.07380661.71020-0.533805.831105.17810HepG2SRFBP1
GEMIN6ENSG00000152147.6535.20550677.11200-0.339302.788702.31410HepG2SRSF1
GEMIN6ENSG00000152147.6459.54400581.03460-0.338402.337501.75620HepG2SRSF5
GEMIN6ENSG00000152147.6334.83490508.12120-0.601706.102505.13270HepG2SRSF7
GEMIN6ENSG00000152147.6335.19400550.84630-0.716708.852607.96480HepG2SRSF9
GEMIN6ENSG00000152147.6260.69920401.32270-0.622403.007702.30620HepG2SUPV3L1
GEMIN6ENSG00000152147.6358.32560657.52690-0.875809.000207.79870HepG2TARDBP
GEMIN6ENSG00000152147.6378.07660559.24330-0.564805.078403.95680HepG2TIA1
GEMIN6ENSG00000152147.6239.79880399.41220-0.736106.081905.39280HepG2TIAL1
GEMIN6ENSG00000152147.6235.86290402.98570-0.772808.007807.12720HepG2TRIM56
GEMIN6ENSG00000152147.6309.89300400.96130-0.371702.423301.76310HepG2UPF1
GEMIN6ENSG00000152147.6588.81630387.114100.605006.397805.55000HepG2UTP3
GEMIN6ENSG00000152147.6354.39930440.98230-0.315302.091901.59760HepG2ZNF622
GEMIN6ENSG00000152147.6293.02570444.77660-0.602102.098101.57370K562AQR
GEMIN6ENSG00000152147.6224.54120370.60120-0.722905.476704.37950K562CPSF6
GEMIN6ENSG00000152147.6566.37420423.669500.418702.529501.90260K562DDX47
GEMIN6ENSG00000152147.6288.82240402.35100-0.478303.292102.51870K562EIF2S2
GEMIN6ENSG00000152147.6248.29680173.993500.512902.328501.59560K562EIF3G
GEMIN6ENSG00000152147.6268.39370377.06940-0.490502.618501.78720K562FMR1
GEMIN6ENSG00000152147.6225.24710319.59660-0.504702.408501.55970K562FTO
GEMIN6ENSG00000152147.6304.90470174.097300.808406.086705.24160K562FXR1
GEMIN6ENSG00000152147.6230.46920353.83640-0.618503.720502.80510K562GPKOW
GEMIN6ENSG00000152147.6132.98290199.87560-0.587902.309601.75760K562HNRNPC
GEMIN6ENSG00000152147.6344.64400229.148800.588702.513201.34090K562HNRNPK
GEMIN6ENSG00000152147.6535.24410305.889700.807106.332804.83930K562HNRNPM
GEMIN6ENSG00000152147.6251.78460345.38240-0.456002.241801.45440K562METAP2
GEMIN6ENSG00000152147.6235.15730326.08150-0.471602.912202.14980K562NSUN2
GEMIN6ENSG00000152147.6134.10400254.99470-0.927103.258702.15970K562PABPN1
GEMIN6ENSG00000152147.6167.77230303.19140-0.853703.007101.47060K562PPP1R8
GEMIN6ENSG00000152147.6310.52450234.231400.406702.093201.50090K562PTBP1
GEMIN6ENSG00000152147.6150.67280216.82310-0.525102.232701.30990K562SRSF5
GEMIN6ENSG00000152147.6285.71400212.611300.426302.031301.32740K562SYNCRIP
GEMIN6ENSG00000152147.6148.69040224.17790-0.592302.820401.99400K562TIA1
GEMIN6ENSG00000152147.6248.09420345.75160-0.478803.136002.37330K562UPF1
GEMIN6ENSG00000152147.6195.14800295.84800-0.600303.485302.50490K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GEMIN6 is not available on ENCORE database.





7 RBPs can affect the splicing of GEMIN6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGEMIN6ENSG00000152147.6chr2+390063993900658339006113390062603900865839009089-0.072000.000010.00044excludedHepG2HNRNPK
SEGEMIN6ENSG00000152147.6chr2+3900639939006583390061133900626039008658390090890.074000.000070.04680includedHepG2SUGP2
SEGEMIN6ENSG00000152147.6chr2+3900639939006583390061133900626039008658390090890.068000.000380.00535includedK562AQR
SEGEMIN6ENSG00000152147.6chr2+3900639939006583390061133900626039008658390090890.081000.008180.09016includedK562PUS1
SEGEMIN6ENSG00000152147.6chr2+3900639939006583390061133900626039008658390090890.061000.000040.03304includedHepG2UPF1
SEGEMIN6ENSG00000152147.6chr2+390063993900658339006113390062603900865839009089-0.081000.001000.03768excludedK562HNRNPU
SEGEMIN6ENSG00000152147.6chr2+3900639939006583390061133900626039008658390090890.139000.000010.00086includedHepG2HNRNPC
SEGEMIN6ENSG00000152147.6chr2+3900639939006583390061133900626039008658390090890.225000.000000.00000includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GEMIN6 is not avaliable on ENCORE database.