FAM47E-STBD1

General Information

Gene Name       : FAM47E-STBD1
Gene ID             : ENSG00000272414.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM47E-STBD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAM47E-STBD1ENSG00000272414.50.000.040.02ENCSR000AEF
HepG2FAM47E-STBD1ENSG00000272414.53.794.484.13ENCSR985KAT
K562FAM47E-STBD1ENSG00000272414.50.650.740.70ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM47E-STBD1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on FAM47E-STBD1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for FAM47E-STBD1 is not avaliable on ENCORE database.






NO known proteins are bound to FAM47E-STBD1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for FAM47E-STBD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM47E-STBD1 is not available on ENCORE database.

  • 80 RBPs can affect the levels of FAM47E-STBD1.  








The Knockdown/knockout RNA-Seq assay for FAM47E-STBD1 is not available on ENCORE database.





80 RBPs can affect the gene expression of FAM47E-STBD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM47E-STBD1ENSG00000118804.7144.12060243.13170-0.754503.832702.58310HepG2AATF
FAM47E-STBD1ENSG00000118804.7268.72860530.11720-0.980204.540703.88150HepG2AKAP1
FAM47E-STBD1ENSG00000118804.7668.66480496.706700.428802.307001.35150HepG2AKAP8
FAM47E-STBD1ENSG00000118804.7614.66030280.945101.1294018.9835017.48500HepG2AUH
FAM47E-STBD1ENSG00000118804.7225.69300138.447800.704902.438001.59550HepG2BCLAF1
FAM47E-STBD1ENSG00000118804.7320.47930143.028901.163801.832101.33610HepG2BOP1
FAM47E-STBD1ENSG00000118804.7178.27760120.028300.570702.340801.62750HepG2CALR
FAM47E-STBD1ENSG00000118804.7343.60180491.98530-0.517904.934204.09340HepG2CKAP4
FAM47E-STBD1ENSG00000118804.7373.30510189.380100.979007.170106.22740HepG2CELF1
FAM47E-STBD1ENSG00000118804.7279.61380455.14960-0.702908.072006.77680HepG2DDX19B
FAM47E-STBD1ENSG00000118804.7121.68380262.47200-1.109008.039606.49660HepG2DDX24
FAM47E-STBD1ENSG00000118804.782.93520146.58450-0.821702.658201.39440HepG2DDX27
FAM47E-STBD1ENSG00000118804.7329.25430507.72160-0.624802.596901.98920HepG2DDX3X
FAM47E-STBD1ENSG00000118804.7272.25890156.699500.796903.155402.33720HepG2DDX55
FAM47E-STBD1ENSG00000118804.7368.69970229.069900.686604.396603.13410HepG2DDX5
FAM47E-STBD1ENSG00000118804.71057.33190436.356501.2767017.1174015.75370HepG2DDX6
FAM47E-STBD1ENSG00000118804.7232.38980470.85110-1.0187012.5788011.35050HepG2DKC1
FAM47E-STBD1ENSG00000118804.7387.12660138.767901.4800013.1108011.67180HepG2DNAJC21
FAM47E-STBD1ENSG00000118804.71487.52410419.268601.8269040.6727038.59880HepG2EIF2S1
FAM47E-STBD1ENSG00000118804.778.16560175.80940-1.169402.480001.61930HepG2EIF3D
FAM47E-STBD1ENSG00000118804.7108.14190253.24010-1.227609.718707.94570HepG2EIF3G
FAM47E-STBD1ENSG00000118804.7224.34680463.23870-1.046003.622202.89330HepG2EIF4A3
FAM47E-STBD1ENSG00000118804.7396.74980192.465101.043508.644207.23520HepG2EIF4G2
FAM47E-STBD1ENSG00000118804.7750.95340480.868800.643006.661705.36870HepG2EWSR1
FAM47E-STBD1ENSG00000118804.7144.58020239.90690-0.730603.668201.68700HepG2EXOSC9
FAM47E-STBD1ENSG00000118804.7137.98620255.52920-0.889005.747204.19410HepG2FASTKD2
FAM47E-STBD1ENSG00000118804.7216.89250434.96090-1.003904.485803.50020HepG2FUBP3
FAM47E-STBD1ENSG00000118804.7115.79020203.23290-0.811603.457202.20670HepG2FUS
FAM47E-STBD1ENSG00000118804.7311.61070467.69810-0.585802.182801.56460HepG2FXR1
FAM47E-STBD1ENSG00000118804.7234.40030460.63640-0.974703.619502.59330HepG2G3BP2
FAM47E-STBD1ENSG00000118804.7664.22630148.759902.158603.218002.53250HepG2GPKOW
FAM47E-STBD1ENSG00000118804.7133.55650389.68600-1.544902.676901.58380HepG2GRSF1
FAM47E-STBD1ENSG00000118804.784.70620194.59640-1.199905.321003.33650HepG2HLTF
FAM47E-STBD1ENSG00000118804.776.87780140.09760-0.865803.018802.34660HepG2HNRNPA1
FAM47E-STBD1ENSG00000118804.7349.14300193.579900.850803.267902.49330HepG2HNRNPF
FAM47E-STBD1ENSG00000118804.7308.39930185.588500.732602.784402.10880HepG2HNRNPL
FAM47E-STBD1ENSG00000118804.7314.37000190.632000.721602.294901.63330HepG2IGF2BP1
FAM47E-STBD1ENSG00000118804.7660.51150440.784200.583404.115703.30700HepG2IGF2BP2
FAM47E-STBD1ENSG00000118804.7697.51950410.374800.765202.565201.30580HepG2ILF3
FAM47E-STBD1ENSG00000118804.7293.42840470.43100-0.681002.695202.07180HepG2MATR3
FAM47E-STBD1ENSG00000118804.7319.32950481.47130-0.592402.319501.73720HepG2NCBP2
FAM47E-STBD1ENSG00000118804.7329.10130143.958101.192805.669804.06950HepG2NONO
FAM47E-STBD1ENSG00000118804.71023.25920384.847401.4107012.9453010.98500HepG2PABPC1
FAM47E-STBD1ENSG00000118804.7839.24760428.593500.969409.903108.55640HepG2PABPC4
FAM47E-STBD1ENSG00000118804.781.91320153.22510-0.903504.355203.32190HepG2PARN
FAM47E-STBD1ENSG00000118804.7265.88670494.52380-0.895203.312402.66050HepG2PCBP1
FAM47E-STBD1ENSG00000118804.798.07050202.27980-1.044504.888203.30260HepG2PRPF6
FAM47E-STBD1ENSG00000118804.7472.39000192.798901.2928014.8434013.60940HepG2PUF60
FAM47E-STBD1ENSG00000118804.7120.27770204.63860-0.766702.276101.72770HepG2PUM1
FAM47E-STBD1ENSG00000118804.7510.21850204.505301.318908.181507.05480HepG2PUM2
FAM47E-STBD1ENSG00000118804.7326.52290501.29300-0.618502.294801.72090HepG2PUS1
FAM47E-STBD1ENSG00000118804.7289.71720185.720800.641401.898101.30290HepG2RAVER1
FAM47E-STBD1ENSG00000118804.7466.46400269.600600.790807.855707.08640HepG2RBM22
FAM47E-STBD1ENSG00000118804.7367.17940560.03030-0.609002.124501.63800HepG2NELFE
FAM47E-STBD1ENSG00000118804.7258.21370521.70390-1.014703.831803.12250HepG2RECQL
FAM47E-STBD1ENSG00000118804.7390.60530208.367400.906501.935801.35200HepG2RPLP0
FAM47E-STBD1ENSG00000118804.7243.21300137.860300.818903.397902.69700HepG2SAFB2
FAM47E-STBD1ENSG00000118804.7321.87320140.486201.196002.928402.20190HepG2SF3B1
FAM47E-STBD1ENSG00000118804.7476.45640184.810801.366208.987207.83650HepG2SLBP
FAM47E-STBD1ENSG00000118804.7500.30750304.505100.716207.620106.90250HepG2SRFBP1
FAM47E-STBD1ENSG00000118804.7216.54310546.82640-1.336406.254605.61440HepG2SRSF1
FAM47E-STBD1ENSG00000118804.7330.23520190.329700.794905.985405.11650HepG2SRSF5
FAM47E-STBD1ENSG00000118804.7382.56200190.147601.008504.762703.88770HepG2SRSF7
FAM47E-STBD1ENSG00000118804.7715.55910444.919100.685405.701704.95930HepG2SRSF9
FAM47E-STBD1ENSG00000118804.7388.08010538.85380-0.473502.718001.44540HepG2SSRP1
FAM47E-STBD1ENSG00000118804.7509.56030194.260801.391205.634304.31620HepG2SUPT6H
FAM47E-STBD1ENSG00000118804.71030.21530155.971202.7235038.5567036.60370HepG2SUPV3L1
FAM47E-STBD1ENSG00000118804.795.26770491.65960-2.3676011.4223010.40600HepG2TAF15
FAM47E-STBD1ENSG00000118804.7257.89890529.27650-1.037205.395303.94590HepG2TBRG4
FAM47E-STBD1ENSG00000118804.7249.97170104.529401.257805.370404.04830HepG2TFIP11
FAM47E-STBD1ENSG00000118804.7391.75930151.773501.3679019.3437018.02460HepG2TRIM56
FAM47E-STBD1ENSG00000118804.7718.44060246.306201.544304.133903.37330HepG2U2AF1
FAM47E-STBD1ENSG00000118804.7911.90250199.299402.1938016.0388014.01830HepG2UBE2L3
FAM47E-STBD1ENSG00000118804.7301.78070133.186101.180003.733602.97290HepG2ZC3H8
FAM47E-STBD1ENSG00000118804.7803.00290326.959101.296204.176303.54200HepG2ZNF622
FAM47E-STBD1ENSG00000118804.739.3280014.090601.480702.754901.58310K562CCDC124
FAM47E-STBD1ENSG00000118804.716.634700.0000099999.999904.437402.54290K562CKAP4
FAM47E-STBD1ENSG00000118804.733.8467013.174001.361202.169501.58070K562DDX47
FAM47E-STBD1ENSG00000118804.736.5083014.256601.356502.227401.57130K562EIF2S2
FAM47E-STBD1ENSG00000118804.79.3877032.76790-1.803402.906802.28900K562FXR1
FAM47E-STBD1ENSG00000118804.734.7237012.465101.477902.544701.52910K562MAK16
FAM47E-STBD1ENSG00000118804.712.436301.123403.468602.363701.43360K562SRFBP1
FAM47E-STBD1ENSG00000118804.717.338401.242703.802303.508502.44950K562TIAL1
FAM47E-STBD1ENSG00000118804.713.240901.327103.318502.290501.44240K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM47E-STBD1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of FAM47E-STBD1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for FAM47E-STBD1 is not avaliable on ENCORE database.