FAM219B

General Information

Gene Name       : FAM219B
Gene ID             : ENSG00000178761.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM219B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAM219BENSG00000178761.1426.2420.7923.52ENCSR000AEF
HepG2FAM219BENSG00000178761.1421.6820.5821.13ENCSR985KAT
K562FAM219BENSG00000178761.1421.4723.7622.62ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM219B is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM219B RNA is bound by 16 proteins.  







eCLIP assay for FAM219B is not avaliable on ENCORE database.





16 proteins are bound to FAM219B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr157519701475197065-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.503845.25527HepG2U2AF2
chr157519502975195104-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.075006.47139HepG2PPIG
chr157519413075194199-3'-UTR,intron-Distal,intron-Proximal3.365724.61367K562UPF1
chr157519272175192904-3'-UTR,intron-Distal3.611229.81218K562FUS
chr157519510475195131-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.169648.65687HepG2PPIG
chr157519702875197105-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.213233.56713HepG2SF3B4
chr157519254975192630-3'-UTR,intron-Distal3.704514.77076HepG2LSM11
chr157519695875197013-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.422736.74268HepG2PRPF8
chr157519700375197120-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.039333.65854HepG2RBFOX2
chr157519324675193298-3'-UTR,intron-Distal3.211803.40404K562CSTF2T
chr157519700075197064-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.262286.76881K562BUD13
chr157519700375197036-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.908066.98305HepG2PPIG
chr157519701075197074-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.747596.69182K562AQR
chr157519504375195130-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.688483.02267HepG2SRSF1
chr157519490775195084-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.618043.40366HepG2UCHL5
chr157519747975197570-5'-UTR,CDS,intron-Distal,intron-Proximal3.8378611.55292HepG2PPIG
chr157519744575197526-5'-UTR,CDS,intron-Distal,intron-Proximal4.038556.88148K562BUD13
chr157519881975198896-5'-UTR,intron-Distal3.697128.32276HepG2EFTUD2
chr157519883575198900-5'-UTR,intron-Distal4.451237.06478HepG2RBM22
chr157519743875197524-5'-UTR,CDS,intron-Distal,intron-Proximal4.3932812.22234HepG2PRPF8
chr157519903075199113-CDS,intron-Distal,intron-Proximal3.636565.38934HepG2NCBP2
chr157519748875197494-intron-Distal,intron-Proximal5.559498.34710K562AQR
chr157519743775197488-intron-Distal,intron-Proximal5.9161112.10660K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM219B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM219B is not available on ENCORE database.

  • 60 RBPs can affect the levels of FAM219B.  








The Knockdown/knockout RNA-Seq assay for FAM219B is not available on ENCORE database.





60 RBPs can affect the gene expression of FAM219B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM219BENSG00000178761.10842.89550654.865900.364102.492201.47100HepG2AATF
FAM219BENSG00000178761.10903.153901247.07060-0.465503.055502.49970HepG2AKAP1
FAM219BENSG00000178761.10740.573701031.87550-0.478603.573402.68360HepG2ASCC1
FAM219BENSG00000178761.10874.013201249.60160-0.515707.941506.87600HepG2AUH
FAM219BENSG00000178761.10995.35700613.433300.698205.302303.99370HepG2BCCIP
FAM219BENSG00000178761.10723.95660525.179400.463003.387302.73220HepG2BOP1
FAM219BENSG00000178761.10521.27450980.34330-0.9112010.800809.36530HepG2CIRBP
FAM219BENSG00000178761.10913.796001107.95350-0.278002.421501.81290HepG2CELF1
FAM219BENSG00000178761.10830.85000645.077100.365002.591901.64100HepG2DHX30
FAM219BENSG00000178761.10537.85450668.82730-0.314402.309701.66140HepG2DNAJC21
FAM219BENSG00000178761.10450.15150678.13150-0.591204.389403.25420HepG2EEF2
FAM219BENSG00000178761.101343.38050986.553600.445303.512502.84870HepG2EIF2S1
FAM219BENSG00000178761.10357.57930550.45800-0.622404.303203.19360HepG2EIF3D
FAM219BENSG00000178761.10851.208401090.32890-0.357201.945401.40550HepG2EIF4A3
FAM219BENSG00000178761.10891.033101125.86090-0.337502.262201.52050HepG2EIF4G2
FAM219BENSG00000178761.102096.149601434.800600.5468011.1479010.07170HepG2ETF1
FAM219BENSG00000178761.10621.05100825.56360-0.410703.323702.40950HepG2EWSR1
FAM219BENSG00000178761.10682.98200521.559600.388902.260701.68550HepG2HNRNPLL
FAM219BENSG00000178761.101185.52870870.047400.446302.712301.89130HepG2LARP4
FAM219BENSG00000178761.10774.805501100.26380-0.505903.931503.15050HepG2MAGOH
FAM219BENSG00000178761.10643.335901106.45690-0.782307.520406.51920HepG2MATR3
FAM219BENSG00000178761.10609.67060965.27430-0.662903.619602.59450HepG2PABPC1
FAM219BENSG00000178761.10769.804601058.96950-0.460106.241605.38570HepG2PCBP1
FAM219BENSG00000178761.10702.023501127.63670-0.683708.536907.56640HepG2PUF60
FAM219BENSG00000178761.10805.673001197.05150-0.5712011.2368010.21070HepG2PUM1
FAM219BENSG00000178761.10487.45570710.11030-0.542802.371901.71570HepG2RAVER1
FAM219BENSG00000178761.10961.750501199.20890-0.318303.190202.64400HepG2RBM22
FAM219BENSG00000178761.10518.01020746.99240-0.528102.781301.71820HepG2RCC2
FAM219BENSG00000178761.101223.56700872.582200.487604.269103.45010HepG2RPLP0
FAM219BENSG00000178761.10379.29540535.65480-0.498003.640302.94490HepG2RPS19
FAM219BENSG00000178761.10551.62270664.44000-0.268502.032901.46770HepG2SAFB2
FAM219BENSG00000178761.10788.87720574.401600.457602.074301.40190HepG2SNRNP70
FAM219BENSG00000178761.10792.049201170.98060-0.564109.240608.48930HepG2SRSF1
FAM219BENSG00000178761.10770.933001113.39540-0.530307.726806.74970HepG2SRSF5
FAM219BENSG00000178761.10616.75770868.43020-0.493703.422602.72930HepG2U2AF1
FAM219BENSG00000178761.10488.32430354.651300.461302.499701.77840HepG2UCHL5
FAM219BENSG00000178761.101134.20860549.695501.044909.801107.85240HepG2UPF2
FAM219BENSG00000178761.101144.92590851.846200.426505.172304.48310HepG2ZNF622
FAM219BENSG00000178761.101220.749401658.28460-0.441903.905703.23250K562AQR
FAM219BENSG00000178761.101923.547002502.72110-0.379705.081103.74950K562CELF1
FAM219BENSG00000178761.10990.200801342.51960-0.439206.306205.37950K562DDX47
FAM219BENSG00000178761.10420.38020646.15870-0.620205.317303.44910K562DNAJC21
FAM219BENSG00000178761.10639.83870825.63320-0.367802.276801.44880K562EFTUD2
FAM219BENSG00000178761.10403.06670611.20850-0.600602.849501.82870K562EIF3A
FAM219BENSG00000178761.10615.60840900.40460-0.548605.366104.22530K562EIF4A3
FAM219BENSG00000178761.10470.96490629.30320-0.418102.348201.51100K562FTO
FAM219BENSG00000178761.10661.36390936.37730-0.501606.119005.27160K562FXR1
FAM219BENSG00000178761.10482.24830696.59440-0.530504.342203.35370K562GPKOW
FAM219BENSG00000178761.10626.78430827.12970-0.400103.014602.39500K562HNRNPC
FAM219BENSG00000178761.101540.915501296.438500.249102.270901.46090K562HNRNPU
FAM219BENSG00000178761.101821.236001274.591900.514805.612104.49500K562HSPD1
FAM219BENSG00000178761.10826.665401088.31680-0.396703.401702.46390K562MAGOH
FAM219BENSG00000178761.10795.936701086.10680-0.448404.559803.34820K562MATR3
FAM219BENSG00000178761.101780.380102169.28250-0.285002.394401.34680K562MSI2
FAM219BENSG00000178761.101156.85810987.576000.228102.008901.31450K562MTPAP
FAM219BENSG00000178761.101142.37080814.393800.488104.145802.23310K562NUSAP1
FAM219BENSG00000178761.101146.23430807.538100.505204.705702.78220K562PHF6
FAM219BENSG00000178761.101797.550301282.830600.486604.306802.29670K562PKM
FAM219BENSG00000178761.10533.99190803.43590-0.589404.816503.83050K562PRPF8
FAM219BENSG00000178761.101068.17970741.609400.526305.463404.13350K562PSIP1
FAM219BENSG00000178761.10801.024201057.36900-0.400603.748002.98600K562PTBP1
FAM219BENSG00000178761.101156.121602220.52760-0.9416017.1416015.05100K562PUF60
FAM219BENSG00000178761.101921.658702314.16360-0.268103.223802.18740K562PUM2
FAM219BENSG00000178761.102728.447701979.860900.462604.944104.24490K562PUS1
FAM219BENSG00000178761.10710.50540956.57190-0.429004.276403.20810K562SF3B4
FAM219BENSG00000178761.10809.018801036.57570-0.357602.924802.20100K562SRSF1
FAM219BENSG00000178761.10577.30420777.90920-0.430302.584401.60600K562SUPV3L1
FAM219BENSG00000178761.101608.792901242.649900.372503.677401.74630K562UPF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM219B is not available on ENCORE database.





17 RBPs can affect the splicing of FAM219B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFAM219BENSG00000178761.10chr15-751970047519705375194341751951277519749475197572-0.198000.005140.07561excludedK562SF3B4
SEFAM219BENSG00000178761.10chr15-7519732275197400751970047519705375197494751975720.277000.001020.02744includedHepG2HNRNPK
SEFAM219BENSG00000178761.10chr15-751986187519870675197494751975727519892775199224-0.493000.000000.00001excludedK562FXR1
SEFAM219BENSG00000178761.10chr15-751970047519705375194341751951277519749475197572-0.090000.004380.05621excludedK562PUS1
SEFAM219BENSG00000178761.10chr15-7519861875198706751974947519757275198927751992210.170000.003210.06693includedK562AGGF1
A3SSFAM219BENSG00000178761.10chr15-7519284975192972751928497519294075194290751944040.099000.003000.06353longerHepG2U2AF2
A3SSFAM219BENSG00000178761.10chr15-7519749475197650751974947519757275198618751989540.186000.002220.01411longerK562AQR
A3SSFAM219BENSG00000178761.10chr15-7519504475195178751950447519512775197004751970530.160000.000020.00017longerK562AQR
A3SSFAM219BENSG00000178761.10chr15-7519284975193015751928497519294075194290751944040.100000.000150.01020longerK562PUS1
RIFAM219BENSG00000178761.10chr15-7519233275195127751923327519440475194944751951270.228000.000000.00000includedK562PUS1
RIFAM219BENSG00000178761.10chr15-7519700475198706751970047519757275198618751987060.182000.012080.09964includedHepG2SF3A3
RIFAM219BENSG00000178761.10chr15-751970047519757275197004751970537519749475197572-0.565000.000000.00013excludedK562HNRNPC
RIFAM219BENSG00000178761.10chr15-751970047519870675197004751975727519861875198706-0.160000.000350.02935excludedK562EIF4G2
RIFAM219BENSG00000178761.10chr15-751970047519757275197004751970537519749475197572-0.576000.001300.01113excludedHepG2U2AF2
RIFAM219BENSG00000178761.10chr15-7519233275195127751923327519440475194944751951270.155000.001860.02310includedK562AGGF1
RIFAM219BENSG00000178761.10chr15-7519700475197572751970047519705375197494751975720.311000.005350.05347includedHepG2QKI
RIFAM219BENSG00000178761.10chr15-7519233275195127751923327519440475194944751951270.207000.000050.00080includedK562AKAP8L
RIFAM219BENSG00000178761.10chr15-7519700475198706751970047519757275198618751987060.150000.010050.07702includedHepG2TAF15
RIFAM219BENSG00000178761.10chr15-751923327519512775192332751944047519494475195127-0.144000.005020.04420excludedHepG2TAF15
RIFAM219BENSG00000178761.10chr15-7519233275195127751923327519440475194944751951270.222000.000020.00041includedK562RBM15
RIFAM219BENSG00000178761.10chr15-7519700475198706751970047519757275198618751987060.135000.006460.09568includedHepG2KHSRP
RIFAM219BENSG00000178761.10chr15-751923327519512775192332751944047519494475195127-0.311000.000020.00955excludedHepG2FUS
RIFAM219BENSG00000178761.10chr15-7519700475197572751970047519705375197494751975720.307000.000540.00824includedHepG2HNRNPK
RIFAM219BENSG00000178761.10chr15-751923327519512775192332751944047519494475195127-0.184000.000620.00916excludedHepG2HNRNPK
RIFAM219BENSG00000178761.10chr15-7519233275195127751923327519440475194944751951270.165000.001000.01453includedK562UTP18
RIFAM219BENSG00000178761.10chr15-7519700475198706751970047519757275198618751987060.215000.009810.05299includedK562AQR
MXEFAM219BENSG00000178761.10chr15-7519749475197572751986187519870675197004751970537519892775199224-0.451000.000030.003592includedK562FXR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FAM219B is not avaliable on ENCORE database.