DHX16

General Information

Gene Name       : DHX16
Gene ID             : ENSG00000204560.9
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: DHX16)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DHX16ENSG00000204560.916.9327.8822.41ENCSR000AEF
HepG2DHX16ENSG00000204560.953.4340.7647.09ENCSR985KAT
K562DHX16ENSG00000204560.947.0144.4445.72ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DHX16 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DHX16 RNA is bound by 25 proteins.  







eCLIP assay for DHX16 is not avaliable on ENCORE database.





25 proteins are bound to DHX16 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr63064065630640765-5'-UTR,CDS,intron-Distal4.677555.85636HepG2NCBP2
chr63062308430623128-CDS,intron-Distal,intron-Proximal3.753803.23382HepG2U2AF1
chr63063818530638199-CDS,intron-Distal,intron-Proximal3.737996.41974HepG2PPIG
chr63063299130633006-CDS,intron-Distal4.255783.71613K562UCHL5
chr63064041830640453-CDS,intron-Distal4.507525.59408HepG2GRWD1
chr63063880430638876-CDS,intron-Distal,intron-Proximal4.951086.18406HepG2TRA2A
chr63063261030632626-CDS,intron-Distal3.902243.82000HepG2GRWD1
chr63062486630624910-CDS,intron-Distal,intron-Proximal5.388759.98717HepG2SF3A3
chr63063035930630444-CDS,intron-Distal,intron-Proximal3.771148.49317HepG2PRPF8
chr63063857330638667-CDS,intron-Distal3.9262219.88339HepG2PPIG
chr63063856830638671-CDS,intron-Distal3.605907.09139HepG2ZNF800
chr63062421430624275-CDS,intron-Distal,intron-Proximal3.388454.39148HepG2PABPN1
chr63063861430638724-CDS,intron-Distal,intron-Proximal3.502105.08339K562TRA2A
chr63063856830638668-CDS,intron-Distal3.9643611.90424K562ZNF622
chr63062252330622583-CDS,intron-Distal3.158484.14504HepG2PABPN1
chr63063858330638664-CDS,intron-Distal4.156963.26022HepG2PRPF4
chr63063295630633024-CDS,intron-Distal3.749863.26875HepG2SRSF9
chr63063881330638954-CDS,intron-Distal,intron-Proximal3.8465413.97192K562ZNF800
chr63062252330622557-CDS,intron-Distal3.314703.79741HepG2GRWD1
chr63062752530627577-CDS,intron-Distal4.251183.02060K562LIN28B
chr63062258330622635-CDS,intron-Distal4.397863.46058HepG2PABPN1
chr63063863630638681-CDS,intron-Distal3.543903.99908K562BUD13
chr63063857730638636-CDS,intron-Distal3.084714.56061K562BUD13
chr63063863830638703-CDS,intron-Distal5.1037915.11473K562UCHL5
chr63063866830638730-CDS,intron-Distal,intron-Proximal3.407407.86771K562ZNF622
chr63062323030623255-CDS,intron-Distal3.120223.22545HepG2PPIG
chr63063881230638877-CDS,intron-Distal,intron-Proximal5.7076911.11666K562UCHL5
chr63063820130638242-CDS,intron-Distal4.957766.73025HepG2GRWD1
chr63063857630638660-CDS,intron-Distal3.272283.65536K562SRSF1
chr63062327830623354-CDS,intron-Distal3.401219.83933K562YBX3
chr63063338030633408-CDS,intron-Distal3.859954.41267HepG2PPIG
chr63063818830638242-CDS,intron-Distal4.979026.24559HepG2ZNF800
chr63063857830638672-CDS,intron-Distal5.2225215.60848HepG2GRWD1
chr63063073130630779-CDS,intron-Distal3.026884.61799HepG2BCLAF1
chr63063858130638713-CDS,intron-Distal3.779066.08625HepG2FXR2
chr63063335530633418-CDS,intron-Distal4.009498.82687K562UCHL5
chr63062798330628031-CDS,intron-Distal,intron-Proximal5.277347.53537HepG2U2AF2
chr63062477530624823-CDS,intron-Distal4.466613.46058HepG2PABPN1
chr63063343730633475-CDS,intron-Distal3.389806.27819HepG2PPIG
chr63063857530638703-CDS,intron-Distal3.6947516.33569HepG2BCLAF1
chr63062307830623130-CDS,intron-Distal,intron-Proximal4.579376.86842HepG2U2AF2
chr63063856830638638-CDS,intron-Distal6.3570920.79576K562UCHL5
chr63062335430623374-CDS,intron-Distal3.772336.82724K562YBX3
chr63063819930638241-CDS,intron-Distal5.0745911.68917HepG2PPIG
chr63063339730633438-CDS,intron-Distal3.831033.22245K562GRWD1
chr63063284630632881-CDS,intron-Distal,intron-Proximal3.961595.06180HepG2BCLAF1
chr63063858730638652-CDS,intron-Distal3.8577611.44223K562ZNF800
chr63063340630633463-CDS,intron-Distal3.929334.21542HepG2SRSF1
chr63063293230633028-CDS,intron-Distal3.5928313.13729HepG2PPIG
chr63063821730638241-CDS,intron-Distal3.248653.02345K562ZNF622
chr63063858930638726-CDS,intron-Distal,intron-Proximal3.3581321.17800K562PUM1
chr63063865230638728-CDS,intron-Distal,intron-Proximal3.5702810.85112K562ZNF800
chr63063815730638224-CDS,intron-Distal,intron-Proximal5.389948.04585HepG2PRPF8
chr63063870330638729-CDS,intron-Distal,intron-Proximal5.476069.64872K562UCHL5
chr63063331630633353-CDS,intron-Distal4.617365.14565K562UCHL5
chr63063857430638640-CDS,intron-Distal3.085916.69056K562GRWD1
chr63063299030633052-CDS,intron-Distal,intron-Proximal4.102893.11282HepG2G3BP1
chr63063887730638920-CDS,intron-Distal4.866976.96356K562UCHL5
chr63063858430638673-CDS,intron-Distal4.148213.75945HepG2UCHL5
chr63062802230628033-intron-Distal,intron-Proximal3.975894.16151HepG2U2AF1
chr63063397430634017-intron-Distal3.477613.55754HepG2U2AF2
chr63063033830630394-intron-Distal,intron-Proximal4.346094.20763HepG2U2AF2
chr63063802130638082-intron-Distal4.339438.80047HepG2EFTUD2
chr63063563030635787-intron-Distal3.996863.90026K562KHSRP
chr63063563030635882-intron-Distal3.961023.73609HepG2KHSRP
chr63062499530625075-intron-Distal4.461608.48623HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DHX16 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DHX16 is not available on ENCORE database.

  • 61 RBPs can affect the levels of DHX16.  








The Knockdown/knockout RNA-Seq assay for DHX16 is not available on ENCORE database.





61 RBPs can affect the gene expression of DHX16 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DHX16ENSG00000204560.51386.959601580.25990-0.188201.859501.34310HepG2ACO1
DHX16ENSG00000204560.52483.170401833.512600.437503.265902.69480HepG2AKAP1
DHX16ENSG00000204560.52621.821602093.419100.324604.191703.37960HepG2AUH
DHX16ENSG00000204560.52216.349401598.802100.471105.225704.43530HepG2BOP1
DHX16ENSG00000204560.51856.358401441.328200.365002.809402.03080HepG2CIRBP
DHX16ENSG00000204560.51410.354901006.995100.485902.537101.80610HepG2CNOT7
DHX16ENSG00000204560.51019.166301467.78500-0.526305.179004.26420HepG2CPSF6
DHX16ENSG00000204560.52162.005801766.857800.291103.824003.08980HepG2CELF1
DHX16ENSG00000204560.51778.597301216.309100.548104.312603.37020HepG2DDX55
DHX16ENSG00000204560.51970.465001508.755700.385102.616102.01550HepG2DDX6
DHX16ENSG00000204560.51427.371501037.346500.460406.430105.39450HepG2DNAJC21
DHX16ENSG00000204560.51242.058101028.229000.272503.344402.63980HepG2DNAJC2
DHX16ENSG00000204560.51772.554401450.402500.289301.823901.32970HepG2EIF2S1
DHX16ENSG00000204560.52286.761101795.391000.348903.123702.25990HepG2EIF4G2
DHX16ENSG00000204560.52846.770502403.661900.244002.834002.22690HepG2ETF1
DHX16ENSG00000204560.5814.890901164.92510-0.515604.959104.05100HepG2HNRNPC
DHX16ENSG00000204560.51362.016301157.222300.235002.327601.76740HepG2HNRNPU
DHX16ENSG00000204560.51930.020101607.759200.263502.513501.82260HepG2IGF2BP1
DHX16ENSG00000204560.51914.915501524.932800.328402.399401.76570HepG2IGF2BP2
DHX16ENSG00000204560.51875.934501529.391000.294602.738401.93370HepG2MSI2
DHX16ENSG00000204560.51327.75410920.543100.528302.607201.75150HepG2PABPC1
DHX16ENSG00000204560.51945.937801482.937000.391903.008102.25700HepG2PABPC4
DHX16ENSG00000204560.52021.886701566.310100.368205.650004.92430HepG2PTBP1
DHX16ENSG00000204560.52143.384001609.599500.413106.358005.49290HepG2PUS1
DHX16ENSG00000204560.52002.048001696.288800.239001.978901.43680HepG2QKI
DHX16ENSG00000204560.52289.764401937.173300.241102.154401.38510HepG2RBM15
DHX16ENSG00000204560.5996.680602008.98800-1.0113029.3539028.02410HepG2RBM22
DHX16ENSG00000204560.51325.142501030.549200.362605.109704.28200HepG2SAFB2
DHX16ENSG00000204560.52675.142802269.027700.237403.161902.63820HepG2SRFBP1
DHX16ENSG00000204560.52045.933301604.059700.350905.548204.61930HepG2SRSF7
DHX16ENSG00000204560.52642.705501969.965400.423708.563007.75810HepG2SSB
DHX16ENSG00000204560.51218.38450880.167400.469003.002501.85280HepG2STIP1
DHX16ENSG00000204560.51728.614701210.774400.513603.969603.18180HepG2SUPV3L1
DHX16ENSG00000204560.51247.549201529.97100-0.294402.911902.33830HepG2TAF15
DHX16ENSG00000204560.51589.123901124.404500.499006.758806.03940HepG2TIAL1
DHX16ENSG00000204560.52367.073401859.648900.348002.037301.32480HepG2UBE2L3
DHX16ENSG00000204560.51439.596901776.75710-0.303604.029903.32660HepG2UTP3
DHX16ENSG00000204560.51582.391201312.960100.269203.475502.73600HepG2ZC3H8
DHX16ENSG00000204560.52588.747902023.999800.354907.864007.06370HepG2ZNF622
DHX16ENSG00000204560.52146.924301668.728200.363405.648404.88280K562AGGF1
DHX16ENSG00000204560.51736.013402235.83290-0.365003.012402.40470K562AQR
DHX16ENSG00000204560.5758.22860978.90870-0.368502.720401.67760K562CCAR1
DHX16ENSG00000204560.52981.936003592.65590-0.268802.646401.69230K562CELF1
DHX16ENSG00000204560.53204.023102180.826800.5549013.9731012.62050K562DDX47
DHX16ENSG00000204560.51555.191401183.954100.393403.032202.07520K562EFTUD2
DHX16ENSG00000204560.51211.79900779.100900.6372010.034508.51150K562EIF3G
DHX16ENSG00000204560.51229.094801552.64030-0.337102.690301.85400K562FIP1L1
DHX16ENSG00000204560.5799.320901129.38480-0.498703.963202.58290K562FKBP4
DHX16ENSG00000204560.51717.075201204.218900.511808.638107.64090K562FXR1
DHX16ENSG00000204560.5337.63920677.05960-1.003806.821305.60090K562G3BP2
DHX16ENSG00000204560.5496.732501301.07950-1.3892031.8278029.87000K562HNRNPC
DHX16ENSG00000204560.52461.290201970.869200.320503.126701.99650K562HNRNPL
DHX16ENSG00000204560.52349.322202018.973200.218502.075801.30270K562HNRNPU
DHX16ENSG00000204560.51491.930401099.052200.440802.740901.55610K562IGF2BP3
DHX16ENSG00000204560.51607.587101843.03610-0.197202.103501.39300K562MTPAP
DHX16ENSG00000204560.51804.695202047.86500-0.182402.461101.75220K562NSUN2
DHX16ENSG00000204560.51753.821701152.128500.606106.751205.57920K562PRPF8
DHX16ENSG00000204560.51573.177101102.855200.512304.296703.48620K562PTBP1
DHX16ENSG00000204560.52727.072503390.95910-0.314303.391502.20530K562PUM1
DHX16ENSG00000204560.52829.173903322.73260-0.232002.408401.51120K562PUM2
DHX16ENSG00000204560.52275.587001722.093300.402003.885603.25750K562PUS1
DHX16ENSG00000204560.51928.222501173.434300.716407.614406.24520K562RPS19
DHX16ENSG00000204560.5867.58320703.622100.302102.223701.45940K562SF3B4
DHX16ENSG00000204560.51781.042601081.269300.719908.186006.97950K562SRSF1
DHX16ENSG00000204560.51905.534001513.253500.332403.526402.59930K562SYNCRIP
DHX16ENSG00000204560.51651.414901094.092000.593905.904104.84400K562TARDBP
DHX16ENSG00000204560.52100.659802518.76180-0.261902.099001.35780K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DHX16 is not available on ENCORE database.





4 RBPs can affect the splicing of DHX16 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDHX16ENSG00000204560.5chr6-306239743062404230623211306233743062416730624286-0.319000.000000.00000excludedHepG2U2AF1
SEDHX16ENSG00000204560.5chr6-306239743062404230623211306233743062416730624286-0.361000.000000.00000excludedHepG2U2AF2
SEDHX16ENSG00000204560.5chr6-306239743062404230623211306233743062416730624286-0.152000.005800.07796excludedK562HNRNPC
A3SSDHX16ENSG00000204560.5chr6-3062750030627649306275003062761130627808306283540.071000.000240.00192longerK562AQR
A3SSDHX16ENSG00000204560.5chr6-3062472830624910306247283062486930627248306272870.053000.000520.00387longerK562AQR
A3SSDHX16ENSG00000204560.5chr6-3062321130623449306232113062337430623974306240420.065000.000000.00001longerK562AQR
A3SSDHX16ENSG00000204560.5chr6-3063068730630919306306873063079830632577306327690.060000.000560.00412longerK562AQR
A3SSDHX16ENSG00000204560.5chr6-3062437330624610306243733062453630624728306248690.054000.000000.00002longerK562AQR
A3SSDHX16ENSG00000204560.5chr6-3062248230622724306224823062265630622951306231130.081000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DHX16 is not avaliable on ENCORE database.