CTNNBL1

General Information

Gene Name       : CTNNBL1
Gene ID             : ENSG00000132792.18
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CTNNBL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CTNNBL1ENSG00000132792.1852.2347.3449.78ENCSR000AEF
HepG2CTNNBL1ENSG00000132792.1883.1894.2588.72ENCSR985KAT
K562CTNNBL1ENSG00000132792.1831.9334.7933.36ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CTNNBL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CTNNBL1 RNA is bound by 20 proteins.  







eCLIP assay for CTNNBL1 is not avaliable on ENCORE database.





20 proteins are bound to CTNNBL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr203636130136361460+3'-UTR,5'-UTR,CDS5.0080413.20738K562UCHL5
chr203636132636361400+3'-UTR,5'-UTR,CDS5.144226.92104HepG2GRWD1
chr203636128036361326+3'-UTR,5'-UTR,CDS,intron-Proximal4.920055.35719HepG2GRWD1
chr203636132236361475+3'-UTR,5'-UTR,CDS,intron-Proximal4.090074.07830K562SRSF1
chr203636132736361470+3'-UTR,5'-UTR,CDS,intron-Proximal6.6968124.26159HepG2BCLAF1
chr203637486936374959+5'-UTR,CDS,intron-Proximal3.023584.34780K562ZNF622
chr203632253536322554+5'-UTR,CDS5.103298.08487HepG2GRWD1
chr203637485936374921+5'-UTR,CDS,intron-Proximal4.065468.03668HepG2BUD13
chr203637489936374996+5'-UTR,CDS3.592957.99106HepG2GRWD1
chr203637486836374934+5'-UTR,CDS,intron-Proximal3.562955.65349K562UCHL5
chr203637486936374898+5'-UTR,CDS,intron-Proximal3.481323.47312HepG2FXR2
chr203632249936322535+5'-UTR,CDS3.264106.59473HepG2GRWD1
chr203637486636374920+5'-UTR,CDS,intron-Proximal3.047453.01994K562BUD13
chr203632252536322555+5'-UTR,CDS,intron-Proximal4.267143.87995K562UCHL5
chr203637486936374930+5'-UTR,CDS,intron-Proximal3.667216.81103HepG2PPIG
chr203637489036374948+5'-UTR,CDS3.659558.25092HepG2BCLAF1
chr203637486836374890+5'-UTR,CDS,intron-Proximal4.475698.80935HepG2BCLAF1
chr203637486936374975+5'-UTR,CDS,intron-Proximal3.074695.37811HepG2ZNF800
chr203637486936374899+5'-UTR,CDS,intron-Proximal4.288797.91821HepG2GRWD1
chr203632248536322555+5'-UTR,CDS,intron-Proximal3.887075.80935K562ZNF622
chr203636577836365835+CDS,intron-Proximal4.904926.88889HepG2G3BP1
chr203636584436365886+CDS4.939937.35950HepG2PPIG
chr203639365836393732+CDS,intron-Proximal3.954236.04280HepG2PRPF8
chr203639356336393637+CDS,intron-Proximal4.662633.62536K562AQR
chr203639362736393695+CDS,intron-Proximal3.407138.34074HepG2PPIG
chr203636145936361470+CDS,intron-Proximal3.493677.15785K562GRWD1
chr203639360736393683+CDS4.870646.26332HepG2GRWD1
chr203639640536396492+CDS,intron-Proximal4.537627.79098HepG2PRPF8
chr203636138336361471+CDS,intron-Proximal4.190913.41051HepG2SRSF1
chr203636140636361471+CDS,intron-Proximal3.4377014.07155HepG2PPIG
chr203638602236386090+CDS,intron-Distal,intron-Proximal5.090325.35117HepG2PRPF8
chr203640578236405812+CDS4.359824.34038HepG2BCLAF1
chr203636577736365832+CDS,intron-Proximal4.916526.46917K562ZNF622
chr203636586636365887+CDS,intron-Proximal3.226343.34034HepG2HLTF
chr203636580536365887+CDS,intron-Proximal3.466584.59935HepG2ZNF800
chr203636140036361457+CDS3.097373.81776HepG2GRWD1
chr203636577436365820+CDS,intron-Proximal3.296203.39477K562BUD13
chr203636581336365887+CDS,intron-Proximal5.042107.15508HepG2FXR2
chr203636582336365866+CDS3.332213.08145HepG2HLTF
chr203639357836393641+CDS,intron-Proximal3.329883.05068HepG2U2AF2
chr203636577836365822+CDS,intron-Proximal3.615499.12797HepG2PPIG
chr203640602936406097+CDS,intron-Proximal3.532913.80334HepG2U2AF2
chr203636577936365813+CDS,intron-Proximal3.238603.09866HepG2FXR2
chr203636141636361474+CDS,intron-Proximal3.554675.10493HepG2AQR
chr203636583436365889+CDS,intron-Proximal4.8663510.80414HepG2BCLAF1
chr203640759436407636+CDS4.292203.49332HepG2PPIG
chr203639637836396448+CDS,intron-Proximal4.4956110.44341HepG2PPIG
chr203648838736488434+CDS3.619485.97027HepG2GRWD1
chr203636583236365887+CDS,intron-Proximal3.482847.67372HepG2GRWD1
chr203647078536470808+CDS3.928553.12746HepG2GRWD1
chr203640766236407737+CDS3.824593.66655K562YBX3
chr203636137736361470+CDS,intron-Proximal3.153643.72388HepG2FXR2
chr203636577836365795+CDS,intron-Proximal3.545967.33120K562GRWD1
chr203636579536365832+CDS3.398614.23869K562GRWD1
chr203639638936396443+CDS3.126903.24162HepG2G3BP1
chr203636583536365885+CDS3.822433.00996K562BUD13
chr203636577736365851+CDS,intron-Proximal5.249319.17286K562UCHL5
chr203639637236396409+CDS3.494494.88141HepG2GRWD1
chr203636577836365829+CDS,intron-Proximal6.1978316.28863HepG2BCLAF1
chr203636135636361473+CDS,intron-Proximal5.3428210.15984HepG2G3BP1
chr203636141136361471+CDS,intron-Proximal5.048046.46917K562ZNF622
chr203636585136365887+CDS,intron-Proximal4.587265.29868K562UCHL5
chr203638437336384460+intron-Distal4.233884.40847HepG2PTBP1
chr203633158236331694+intron-Distal3.796805.09669HepG2QKI
chr203638890036388981+intron-Distal4.386094.31871HepG2HNRNPM
chr203647842036478555+intron-Distal3.787755.81617HepG2QKI
chr203637516336375257+intron-Distal4.406004.17759HepG2QKI
chr203633345336333558+intron-Distal4.353994.86548HepG2SUGP2
chr203633581836335884+intron-Distal3.885023.63454HepG2SUGP2
chr203633117436331242+intron-Distal4.457215.83842HepG2SUGP2
chr203633419636334271+intron-Distal4.554296.07481HepG2SUGP2
chr203642148036421594+intron-Distal3.901583.42844K562KHSRP
chr203638446036384533+intron-Distal4.029843.74583HepG2PTBP1
chr203633130436331395+intron-Distal4.450315.31529HepG2SUGP2
chr203633660136336661+intron-Distal3.685053.04224HepG2SUGP2
chr203642837836428442+intron-Distal3.724053.04224HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CTNNBL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CTNNBL1 is not available on ENCORE database.

  • 65 RBPs can affect the levels of CTNNBL1.  








The Knockdown/knockout RNA-Seq assay for CTNNBL1 is not available on ENCORE database.





65 RBPs can affect the gene expression of CTNNBL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CTNNBL1ENSG00000132792.141161.957601653.55430-0.509004.625403.62300HepG2ASCC1
CTNNBL1ENSG00000132792.141083.465301390.11170-0.359502.982901.52560HepG2ATP5C1
CTNNBL1ENSG00000132792.14849.259601230.50880-0.535004.343503.23980HepG2BCLAF1
CTNNBL1ENSG00000132792.142034.941301571.015400.373202.928902.13400HepG2CIRBP
CTNNBL1ENSG00000132792.14775.496401207.63850-0.639006.836105.79220HepG2CPSF6
CTNNBL1ENSG00000132792.141956.476402219.20340-0.181802.077901.42230HepG2DAZAP1
CTNNBL1ENSG00000132792.141191.634701644.80860-0.465003.440602.75900HepG2DDX6
CTNNBL1ENSG00000132792.14947.849901120.61380-0.241602.541501.91140HepG2DNAJC2
CTNNBL1ENSG00000132792.14950.538801580.80580-0.733808.475007.47550HepG2EIF2S1
CTNNBL1ENSG00000132792.141395.215901746.78820-0.324201.946101.40610HepG2EIF4A3
CTNNBL1ENSG00000132792.142694.290202189.514700.299204.549403.51750HepG2EIF4G1
CTNNBL1ENSG00000132792.141377.956302097.39080-0.606107.435106.12700HepG2EIF4G2
CTNNBL1ENSG00000132792.141721.510502319.95120-0.430407.727206.80870HepG2ETF1
CTNNBL1ENSG00000132792.141098.306901635.14640-0.574105.280904.37430HepG2G3BP1
CTNNBL1ENSG00000132792.141697.415502039.58670-0.264902.926901.96910HepG2HNRNPA2B1
CTNNBL1ENSG00000132792.141494.695601860.61520-0.315904.016403.16830HepG2HNRNPF
CTNNBL1ENSG00000132792.14820.161001306.40830-0.671607.240106.27790HepG2HNRNPLL
CTNNBL1ENSG00000132792.141483.029601832.18000-0.305002.779002.05300HepG2IGF2BP1
CTNNBL1ENSG00000132792.141009.288901288.26750-0.352105.569204.56000HepG2ILF2
CTNNBL1ENSG00000132792.141234.323301671.87110-0.437702.716401.72430HepG2KHSRP
CTNNBL1ENSG00000132792.141026.303901274.40790-0.312404.147802.91200HepG2KIF1C
CTNNBL1ENSG00000132792.141542.814602029.85620-0.395802.197801.46410HepG2LARP4
CTNNBL1ENSG00000132792.141568.273102200.56590-0.488707.423706.19050HepG2NOL12
CTNNBL1ENSG00000132792.141068.303601616.11890-0.597205.847004.81180HepG2PABPC4
CTNNBL1ENSG00000132792.141289.505701713.30320-0.410006.206305.45050HepG2PTBP1
CTNNBL1ENSG00000132792.141716.057402230.01070-0.378007.635606.75210HepG2PUM1
CTNNBL1ENSG00000132792.141867.833902228.35040-0.254602.252801.64490HepG2PUM2
CTNNBL1ENSG00000132792.141240.889201420.07490-0.194601.855301.32970HepG2PUS1
CTNNBL1ENSG00000132792.141456.781301855.45580-0.349003.914403.18870HepG2QKI
CTNNBL1ENSG00000132792.141648.082201939.04820-0.234602.338801.85220HepG2RBM22
CTNNBL1ENSG00000132792.141164.460101683.98090-0.532206.726305.71600HepG2RBM25
CTNNBL1ENSG00000132792.141548.757201775.90340-0.197401.842001.32490HepG2RECQL
CTNNBL1ENSG00000132792.14827.158901378.45510-0.736805.431304.13300HepG2RPS10
CTNNBL1ENSG00000132792.14714.606801062.49290-0.572204.362603.40020HepG2RRP9
CTNNBL1ENSG00000132792.14738.245301043.19810-0.498804.179203.02970HepG2SERBP1
CTNNBL1ENSG00000132792.142243.596401635.311900.456103.084902.37260HepG2SF3A3
CTNNBL1ENSG00000132792.141265.585801783.69080-0.495108.743107.78280HepG2SF3B4
CTNNBL1ENSG00000132792.141640.553202014.32440-0.296104.478903.61890HepG2SLBP
CTNNBL1ENSG00000132792.141074.970101430.88230-0.412602.353601.47780HepG2SMNDC1
CTNNBL1ENSG00000132792.14719.173901438.78090-1.000409.137807.72340HepG2SNRNP70
CTNNBL1ENSG00000132792.142323.150701861.819300.319304.898204.31500HepG2SRSF1
CTNNBL1ENSG00000132792.141407.544601827.97480-0.377105.674204.73480HepG2SRSF7
CTNNBL1ENSG00000132792.141006.895701514.71690-0.5891012.1178011.10660HepG2SRSF9
CTNNBL1ENSG00000132792.14827.205701311.37890-0.664804.410302.88290HepG2SUB1
CTNNBL1ENSG00000132792.14912.945601386.06890-0.602405.146504.26920HepG2SUPV3L1
CTNNBL1ENSG00000132792.14747.081701273.36870-0.769309.887008.64140HepG2TARDBP
CTNNBL1ENSG00000132792.141279.325401537.68360-0.265402.063601.33890HepG2TIA1
CTNNBL1ENSG00000132792.141025.963901236.44660-0.269202.770902.20650HepG2TRIM56
CTNNBL1ENSG00000132792.141464.682802052.35380-0.486706.116004.74840HepG2TUFM
CTNNBL1ENSG00000132792.141248.038001450.27270-0.216702.217101.58090HepG2UPF1
CTNNBL1ENSG00000132792.141947.450101400.179600.475908.954107.97670HepG2UTP3
CTNNBL1ENSG00000132792.14821.222001281.92310-0.6425013.7991012.49050HepG2ZC3H8
CTNNBL1ENSG00000132792.14878.62480714.801500.297602.453501.91350K562AGGF1
CTNNBL1ENSG00000132792.14475.15410605.76220-0.350402.231701.52050K562CPSF6
CTNNBL1ENSG00000132792.141247.68580912.805400.450804.697603.87950K562DDX47
CTNNBL1ENSG00000132792.14688.49840517.132200.412803.339002.46960K562EIF3G
CTNNBL1ENSG00000132792.14778.34960527.211300.561906.445505.57770K562FXR1
CTNNBL1ENSG00000132792.14358.85690482.51340-0.427201.951701.37010K562G3BP2
CTNNBL1ENSG00000132792.14432.01930578.37380-0.420902.630401.85350K562GPKOW
CTNNBL1ENSG00000132792.14457.24520603.74150-0.401002.313001.76050K562HNRNPC
CTNNBL1ENSG00000132792.14929.08900700.070900.408202.714701.49660K562HNRNPK
CTNNBL1ENSG00000132792.141050.880701431.80500-0.446203.552702.27220K562MSI2
CTNNBL1ENSG00000132792.14598.58640779.03490-0.380102.255501.50540K562PCBP3
CTNNBL1ENSG00000132792.14951.23650608.845400.643605.581604.51460K562PRPF8
CTNNBL1ENSG00000132792.14356.21380493.73060-0.471003.032701.99160K562RCC2
CTNNBL1ENSG00000132792.14638.41420501.726400.347502.510901.69810K562SF3B4
CTNNBL1ENSG00000132792.14812.55910599.356400.439003.905302.92920K562SYNCRIP
CTNNBL1ENSG00000132792.14897.255701181.30950-0.396803.481002.49460K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CTNNBL1 is not available on ENCORE database.





2 RBPs can affect the splicing of CTNNBL1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECTNNBL1ENSG00000132792.14chr20+3632332836323435363224333632255436361280363614690.091000.000010.00024includedK562HNRNPC
A3SSCTNNBL1ENSG00000132792.14chr20+3640755736407737364075883640773736406055364061140.082000.010250.05398longerK562AQR
A3SSCTNNBL1ENSG00000132792.14chr20+3646847436468601364685033646860136431268364314500.126000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CTNNBL1 is not avaliable on ENCORE database.