CREB3L1

General Information

Gene Name       : CREB3L1
Gene ID             : ENSG00000157613.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CREB3L1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CREB3L1ENSG00000157613.100.160.190.17ENCSR000AEF
HepG2CREB3L1ENSG00000157613.100.000.000.00ENCSR985KAT
K562CREB3L1ENSG00000157613.1014.7810.8812.83ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CREB3L1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CREB3L1 RNA is bound by 8 proteins.  







eCLIP assay for CREB3L1 is not avaliable on ENCORE database.





8 proteins are bound to CREB3L1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr114634271646342779+3'-UTR4.556436.16999K562TIA1
chr114634270246342837+3'-UTR4.3850622.73430K562PUM2
chr114634263146342694+3'-UTR4.6553511.22023K562PUM2
chr114634231046342421+3'-UTR4.263107.01305K562IGF2BP2
chr114634278346342887+3'-UTR4.0979614.17363K562TIA1
chr114634244646342533+3'-UTR4.031393.83943K562HNRNPK
chr114634256146342634+3'-UTR3.931783.94601K562PCBP1
chr114634278346342830+3'-UTR3.968426.89681K562PABPC4
chr114633157546331591+CDS3.275424.30677K562YBX3
chr114633159146331600+CDS3.276854.53005K562YBX3
chr114631543846315545+intron-Distal3.534367.91700K562TARDBP
chr114631554546315633+intron-Distal4.311704.85626K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CREB3L1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CREB3L1 is not available on ENCORE database.

  • 71 RBPs can affect the levels of CREB3L1.  








The Knockdown/knockout RNA-Seq assay for CREB3L1 is not available on ENCORE database.





71 RBPs can affect the gene expression of CREB3L1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CREB3L1ENSG00000157613.618.455700.939104.296503.957203.15910HepG2PUM2
CREB3L1ENSG00000157613.6630.17800445.230100.501103.863802.44240K562AARS
CREB3L1ENSG00000157613.61401.63800901.078600.637307.194105.24780K562ABCF1
CREB3L1ENSG00000157613.6850.18750667.334600.349302.444001.52930K562AKAP8
CREB3L1ENSG00000157613.6500.65570631.93640-0.336001.981001.42650K562AKAP8L
CREB3L1ENSG00000157613.6829.74370663.047000.323502.630301.74050K562ATP5C1
CREB3L1ENSG00000157613.6491.91590307.191600.679206.676205.15300K562BCLAF1
CREB3L1ENSG00000157613.61378.25690940.830300.550705.302204.08370K562BOP1
CREB3L1ENSG00000157613.6989.38660627.625600.656503.345901.74680K562BUD13
CREB3L1ENSG00000157613.6789.83850443.584900.832209.546607.24250K562CCAR1
CREB3L1ENSG00000157613.61427.27460725.786900.9755020.3365017.34720K562CCDC124
CREB3L1ENSG00000157613.61560.26740912.807100.773308.574005.93580K562CKAP4
CREB3L1ENSG00000157613.61659.78650909.689700.8675015.1097012.62930K562CPEB4
CREB3L1ENSG00000157613.6375.86740233.050600.689505.061503.56530K562CSTF2
CREB3L1ENSG00000157613.61210.03520712.547600.763909.773707.11310K562DDX19B
CREB3L1ENSG00000157613.6760.15250941.28880-0.308303.048802.36860K562DDX47
CREB3L1ENSG00000157613.6705.05040496.603600.505503.721902.13850K562DHX30
CREB3L1ENSG00000157613.6467.36020285.363200.711604.871503.64450K562EFTUD2
CREB3L1ENSG00000157613.6522.98350371.683800.492604.294902.76300K562EIF2S1
CREB3L1ENSG00000157613.61097.44260448.669801.2903022.3958020.66080K562EIF2S2
CREB3L1ENSG00000157613.6447.35500305.421900.550502.744901.71300K562EIF3D
CREB3L1ENSG00000157613.6518.70840318.377700.704105.332903.65480K562EIF4B
CREB3L1ENSG00000157613.6914.06020682.605800.421103.696902.20450K562EXOSC5
CREB3L1ENSG00000157613.6243.62230163.473100.575503.183201.73500K562FUS
CREB3L1ENSG00000157613.678.66550151.23730-0.943003.718402.87190K562G3BP2
CREB3L1ENSG00000157613.6535.56840286.107600.904407.539005.19400K562GEMIN5
CREB3L1ENSG00000157613.61343.38090955.184500.491903.556002.65940K562GPKOW
CREB3L1ENSG00000157613.6464.47310597.83500-0.364202.249501.56470K562GRSF1
CREB3L1ENSG00000157613.6319.83780513.44230-0.682902.619501.57490K562HNRNPA1
CREB3L1ENSG00000157613.6811.82140487.182000.736608.375807.38830K562HNRNPC
CREB3L1ENSG00000157613.6589.29280435.049300.437703.057201.85180K562HNRNPF
CREB3L1ENSG00000157613.6606.58520273.185201.150709.035106.78580K562IGF2BP2
CREB3L1ENSG00000157613.6523.11110277.784000.9131010.016307.61830K562IGF2BP3
CREB3L1ENSG00000157613.6317.37810463.45400-0.546203.272001.63650K562ILF3
CREB3L1ENSG00000157613.61623.81720815.518900.993503.535602.46600K562KRR1
CREB3L1ENSG00000157613.6685.64760471.758800.539304.597102.73660K562LARP7
CREB3L1ENSG00000157613.6641.29960434.401700.561904.894502.78010K562LSM11
CREB3L1ENSG00000157613.6375.47500286.903100.388102.090101.35420K562MAGOH
CREB3L1ENSG00000157613.61101.18080751.300600.551504.102002.96040K562MBNL1
CREB3L1ENSG00000157613.6636.89770803.42730-0.335103.037802.19260K562MTPAP
CREB3L1ENSG00000157613.6419.99600281.458300.577403.109601.71240K562NONO
CREB3L1ENSG00000157613.61201.70000892.689000.428705.588804.58390K562NSUN2
CREB3L1ENSG00000157613.6525.13230280.543100.9044010.376007.75090K562PCBP1
CREB3L1ENSG00000157613.6350.79040255.235500.458702.209801.34020K562PCBP2
CREB3L1ENSG00000157613.61398.02300838.240900.737903.249901.69720K562PNPT1
CREB3L1ENSG00000157613.6731.86090278.759501.3924026.4923024.53980K562PTBP1
CREB3L1ENSG00000157613.6498.10620267.185800.898509.097107.43100K562RBM22
CREB3L1ENSG00000157613.6488.38880260.540400.906408.335105.69010K562RBM34
CREB3L1ENSG00000157613.6755.03830398.524600.9218012.7601010.62320K562RCC2
CREB3L1ENSG00000157613.6383.09500281.196300.446002.357401.36580K562NELFE
CREB3L1ENSG00000157613.6475.32930267.205300.830905.757704.24400K562RPS3
CREB3L1ENSG00000157613.61529.62850880.842700.7961017.1367015.24560K562SF3A3
CREB3L1ENSG00000157613.6305.80550157.275200.959208.256006.74030K562SF3B4
CREB3L1ENSG00000157613.61844.511001111.774400.730305.685803.14860K562SMN1
CREB3L1ENSG00000157613.6682.18550377.791300.852509.294907.08930K562SRFBP1
CREB3L1ENSG00000157613.6497.94610273.300200.865408.778207.52550K562SRSF1
CREB3L1ENSG00000157613.6457.98720257.892700.828406.780605.00980K562SRSF4
CREB3L1ENSG00000157613.6589.97030849.84540-0.526604.338902.60520K562SSRP1
CREB3L1ENSG00000157613.6424.14630744.23370-0.811203.489301.82580K562SUPT6H
CREB3L1ENSG00000157613.6505.24350268.718100.910804.990903.59210K562SUPV3L1
CREB3L1ENSG00000157613.6503.82330668.01760-0.407003.154602.27810K562SYNCRIP
CREB3L1ENSG00000157613.6501.28080276.548300.858007.917506.64280K562TARDBP
CREB3L1ENSG00000157613.6364.30160245.044800.572003.162501.35920K562TFIP11
CREB3L1ENSG00000157613.6478.40700266.775000.842508.276106.74960K562TIA1
CREB3L1ENSG00000157613.6406.79510261.902400.635204.200002.80670K562TRA2A
CREB3L1ENSG00000157613.6818.21550446.334400.8743010.741708.58830K562TRIM56
CREB3L1ENSG00000157613.61454.08040971.826300.5812010.934508.42520K562TROVE2
CREB3L1ENSG00000157613.61447.65790946.536400.6129012.0377010.67100K562UPF1
CREB3L1ENSG00000157613.61256.22330833.478700.591805.121403.48550K562UTP3
CREB3L1ENSG00000157613.6674.80800842.21730-0.319702.156001.40150K562WDR43
CREB3L1ENSG00000157613.6467.31750289.798500.689304.690002.96020K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CREB3L1 is not available on ENCORE database.





1 RBPs can affect the splicing of CREB3L1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECREB3L1ENSG00000157613.6chr11+4633672146336832463344014633447046337836463379360.053000.000300.05247includedK562EIF4G2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CREB3L1 is not avaliable on ENCORE database.