CCNE2

General Information

Gene Name       : CCNE2
Gene ID             : ENSG00000175305.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CCNE2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CCNE2ENSG00000175305.1733.7727.8930.83ENCSR000AEF
HepG2CCNE2ENSG00000175305.172.515.664.08ENCSR985KAT
K562CCNE2ENSG00000175305.1716.7423.2519.99ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CCNE2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CCNE2 RNA is bound by 1 proteins.  







eCLIP assay for CCNE2 is not avaliable on ENCORE database.





1 proteins are bound to CCNE2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr89589253295892581-3'-UTR,intron-Distal5.643995.76336K562PUM2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CCNE2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CCNE2 is not available on ENCORE database.

  • 77 RBPs can affect the levels of CCNE2.  








The Knockdown/knockout RNA-Seq assay for CCNE2 is not available on ENCORE database.





77 RBPs can affect the gene expression of CCNE2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CCNE2ENSG00000175305.12165.4007089.717400.882403.661101.69150HepG2AARS
CCNE2ENSG00000175305.12124.7436055.175601.176803.056302.06490HepG2ABCF1
CCNE2ENSG00000175305.12163.0558039.924502.0299010.449209.48140HepG2AKAP1
CCNE2ENSG00000175305.12120.0967068.910900.801302.601901.85510HepG2AKAP8L
CCNE2ENSG00000175305.1229.0284094.39820-1.701306.234605.37830HepG2BOP1
CCNE2ENSG00000175305.1236.1534068.57530-0.923602.415601.78620HepG2CKAP4
CCNE2ENSG00000175305.1249.2049086.66700-0.816701.897401.31650HepG2CPSF6
CCNE2ENSG00000175305.12100.0833045.372801.141203.308502.09720HepG2CPSF7
CCNE2ENSG00000175305.12124.7383056.588701.140205.530104.08470HepG2CSTF2
CCNE2ENSG00000175305.12136.1463090.773100.584701.877501.32920HepG2CELF1
CCNE2ENSG00000175305.12200.1393084.235601.248406.765404.84270HepG2DDX27
CCNE2ENSG00000175305.1227.0176052.27290-0.952201.920201.32260HepG2DNAJC21
CCNE2ENSG00000175305.1289.1457041.806401.092302.744801.58080HepG2EIF2S2
CCNE2ENSG00000175305.1286.0526033.982001.340303.488002.71930HepG2EIF4B
CCNE2ENSG00000175305.12112.2765055.700601.011202.248001.55030HepG2FIP1L1
CCNE2ENSG00000175305.1284.3440035.211901.260103.596702.81420HepG2FXR1
CCNE2ENSG00000175305.1284.3914032.668401.369104.314303.49250HepG2G3BP1
CCNE2ENSG00000175305.1276.6565034.676201.144402.920102.00210HepG2G3BP2
CCNE2ENSG00000175305.1238.9443098.25560-1.335104.198903.42150HepG2GPKOW
CCNE2ENSG00000175305.12170.5680089.714000.926804.440203.30540HepG2HNRNPA2B1
CCNE2ENSG00000175305.1245.07200102.69380-1.188004.721303.81510HepG2HNRNPF
CCNE2ENSG00000175305.1252.4527093.76610-0.838102.058301.50670HepG2HNRNPLL
CCNE2ENSG00000175305.1296.3995038.393401.328104.276203.11830HepG2HNRNPM
CCNE2ENSG00000175305.1248.88640101.12430-1.048603.668602.84440HepG2IGF2BP1
CCNE2ENSG00000175305.12105.1239033.399001.654102.351101.43880HepG2KHSRP
CCNE2ENSG00000175305.1233.0293062.69750-0.924702.266001.34150HepG2KIF1C
CCNE2ENSG00000175305.12120.4648063.644300.920402.926701.76090HepG2LARP7
CCNE2ENSG00000175305.12132.6463035.224201.912809.507308.30880HepG2MAGOH
CCNE2ENSG00000175305.1283.9759035.422601.245203.295402.61250HepG2MATR3
CCNE2ENSG00000175305.12117.4516045.020701.383304.318203.31990HepG2MSI2
CCNE2ENSG00000175305.12158.1610036.258102.1249012.3437011.05690HepG2NCBP2
CCNE2ENSG00000175305.12220.2962096.812701.186105.922004.80910HepG2NOL12
CCNE2ENSG00000175305.1243.0012083.13300-0.951002.057601.40840HepG2NSUN2
CCNE2ENSG00000175305.1265.8800025.192701.386702.519601.93340HepG2PCBP1
CCNE2ENSG00000175305.12102.8454025.629002.004509.188308.30750HepG2PTBP1
CCNE2ENSG00000175305.1246.5210092.40750-0.990103.102702.47740HepG2PUF60
CCNE2ENSG00000175305.12158.8653098.084500.695602.280901.73180HepG2PUM1
CCNE2ENSG00000175305.12189.7519069.856101.4416010.994409.90500HepG2PUS1
CCNE2ENSG00000175305.1277.8833027.768601.487804.269203.51770HepG2QKI
CCNE2ENSG00000175305.12269.6952078.037901.7890010.883609.54940HepG2RAVER1
CCNE2ENSG00000175305.1254.5794089.48250-0.713201.892801.44310HepG2RBM22
CCNE2ENSG00000175305.1273.7431028.527201.370103.577502.97850HepG2NELFE
CCNE2ENSG00000175305.1272.1527026.560801.441703.952103.23210HepG2RECQL
CCNE2ENSG00000175305.1218.11930110.62370-2.6101013.1784011.88850HepG2RPLP0
CCNE2ENSG00000175305.1219.0617043.20970-1.180702.058201.36850HepG2RPS3A
CCNE2ENSG00000175305.1263.3657026.693001.247102.821202.22490HepG2SF3B4
CCNE2ENSG00000175305.12136.3868027.857702.2915012.6994011.84650HepG2SRSF1
CCNE2ENSG00000175305.1231.49660100.89270-1.679607.445606.39260HepG2SRSF7
CCNE2ENSG00000175305.1261.9354022.660201.450504.081303.43570HepG2SRSF9
CCNE2ENSG00000175305.1220.1562056.68210-1.491703.256402.72070HepG2TIAL1
CCNE2ENSG00000175305.1228.1469057.16000-1.022002.335401.80840HepG2TRIM56
CCNE2ENSG00000175305.12174.9590095.529600.872902.714601.88520HepG2UBE2L3
CCNE2ENSG00000175305.1240.4160077.74070-0.943702.658701.97150HepG2UPF1
CCNE2ENSG00000175305.12100.4543038.042801.400706.028505.09710HepG2ZC3H8
CCNE2ENSG00000175305.1225.7075085.49960-1.733707.211506.43650HepG2ZNF622
CCNE2ENSG00000175305.12284.21110177.885300.675903.765302.36590K562AARS
CCNE2ENSG00000175305.12767.63910581.937100.399502.660101.46940K562ABCF1
CCNE2ENSG00000175305.12174.71220301.43480-0.786905.198403.46040K562CIRBP
CCNE2ENSG00000175305.12290.81170492.37460-0.759704.167202.32990K562CKAP4
CCNE2ENSG00000175305.12301.66820406.04830-0.428702.668201.58220K562CPEB4
CCNE2ENSG00000175305.12191.58140299.87500-0.646404.392502.84600K562DDX21
CCNE2ENSG00000175305.12275.74130420.26450-0.608005.207604.35260K562DDX47
CCNE2ENSG00000175305.12482.73610249.286800.953305.760503.89110K562EEF2
CCNE2ENSG00000175305.12231.55570159.681500.536102.473101.69800K562EIF4A3
CCNE2ENSG00000175305.12711.92380594.071700.261002.157001.32200K562EIF4G2
CCNE2ENSG00000175305.12494.05390166.063401.5728025.7447024.01460K562FXR1
CCNE2ENSG00000175305.12335.56520207.685200.692103.640302.80370K562G3BP2
CCNE2ENSG00000175305.12210.64040300.66530-0.513402.532601.77020K562GPKOW
CCNE2ENSG00000175305.12276.36920584.45560-1.0805012.7474011.10700K562GRSF1
CCNE2ENSG00000175305.12177.53120295.72410-0.736205.058403.62110K562HNRNPA1
CCNE2ENSG00000175305.12289.16830194.750700.570202.944402.33130K562HNRNPC
CCNE2ENSG00000175305.12272.79030379.77640-0.477402.828301.75750K562HNRNPL
CCNE2ENSG00000175305.12242.34870327.48540-0.434302.397801.56530K562HNRNPU
CCNE2ENSG00000175305.12190.00460285.96970-0.589803.199501.89260K562IGF2BP3
CCNE2ENSG00000175305.12129.26570256.69380-0.989704.940303.64840K562KRR1
CCNE2ENSG00000175305.12392.76060295.578900.410002.255701.49290K562MAGOH
CCNE2ENSG00000175305.12201.33540299.16530-0.571303.716902.79050K562MTPAP
CCNE2ENSG00000175305.12243.85600159.441100.612903.190801.86610K562NCBP2
CCNE2ENSG00000175305.12841.20870649.732300.372502.977801.42740K562NOL12
CCNE2ENSG00000175305.12218.52250332.42710-0.605304.567203.63740K562NSUN2
CCNE2ENSG00000175305.12535.65090329.042700.702904.995103.87790K562PCBP3
CCNE2ENSG00000175305.12469.00680252.391800.893808.181706.82880K562POLR2G
CCNE2ENSG00000175305.12354.55450474.94320-0.421702.354701.59930K562PPIG
CCNE2ENSG00000175305.12542.91050287.160700.918805.449504.54490K562PTBP1
CCNE2ENSG00000175305.12545.90530340.667200.680204.766204.07800K562PUS1
CCNE2ENSG00000175305.12478.10700275.445900.795507.285205.83800K562RBM22
CCNE2ENSG00000175305.12341.34640224.871900.602003.585802.34660K562SAFB
CCNE2ENSG00000175305.12239.24010327.97980-0.455102.704101.89850K562SF3A3
CCNE2ENSG00000175305.12405.66140281.494100.527103.382902.60680K562SRSF1
CCNE2ENSG00000175305.12418.94130253.148800.726706.173404.93970K562SYNCRIP
CCNE2ENSG00000175305.12262.57380352.47730-0.424802.735902.02110K562UPF1
CCNE2ENSG00000175305.12168.75890301.60730-0.837703.928702.87970K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CCNE2 is not available on ENCORE database.





2 RBPs can affect the splicing of CCNE2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSCCNE2ENSG00000175305.12chr8-9590015495900335959001549590030195902642959027780.071000.014840.07410longerK562AQR
MXECCNE2ENSG00000175305.12chr8-9589769095897786959001549590030195897294958974299590264295902686-0.264000.003340.049532includedK562U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CCNE2 is not avaliable on ENCORE database.