C1orf168

General Information

Gene Name       : C1orf168
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C1orf168)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C1orf168 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C1orf168 RNA is bound by 3 proteins.  







eCLIP assay for C1orf168 is not avaliable on ENCORE database.





3 proteins are bound to C1orf168 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr15723724757237347-intron-Distal4.040373.16986HepG2QKI
chr15719593657196042-intron-Distal5.4083210.24238HepG2PCBP2
chr15719593757196042-intron-Distal4.540733.92947HepG2DDX59
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C1orf168 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C1orf168 is not available on ENCORE database.

  • 72 RBPs can affect the levels of C1orf168.  








The Knockdown/knockout RNA-Seq assay for C1orf168 is not available on ENCORE database.





72 RBPs can affect the gene expression of C1orf168 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C1orf168ENSG00000187889.8161.4183042.645001.9203010.260008.63210HepG2ABCF1
C1orf168ENSG00000187889.816.7954040.80330-1.280601.830001.31710HepG2ACO1
C1orf168ENSG00000187889.891.9908038.205701.267604.427903.20210HepG2ADAR
C1orf168ENSG00000187889.815.13640106.78150-2.8186010.199209.24400HepG2AKAP1
C1orf168ENSG00000187889.832.1296088.36080-1.459503.756902.84680HepG2ASCC1
C1orf168ENSG00000187889.835.6171097.55290-1.453606.193805.23140HepG2AUH
C1orf168ENSG00000187889.8105.6938046.255801.192103.691402.66500HepG2BCLAF1
C1orf168ENSG00000187889.8212.8919083.946201.342508.330907.04610HepG2CIRBP
C1orf168ENSG00000187889.896.4680040.821001.240604.873204.03760HepG2CKAP4
C1orf168ENSG00000187889.871.7217032.880801.125102.922501.82020HepG2CSTF2
C1orf168ENSG00000187889.820.5194072.21870-1.815405.831504.96450HepG2CELF1
C1orf168ENSG00000187889.8141.6102037.749401.9073012.1764010.68240HepG2DDX19B
C1orf168ENSG00000187889.8411.1964058.653602.8094042.6685040.48060HepG2DDX21
C1orf168ENSG00000187889.8146.2442057.432501.348306.751105.33140HepG2DDX24
C1orf168ENSG00000187889.8122.6323037.583001.706105.823004.41310HepG2DDX5
C1orf168ENSG00000187889.87.4694087.84190-3.5558012.7940011.58120HepG2DDX6
C1orf168ENSG00000187889.869.8101037.103700.911802.249101.36650HepG2DHX30
C1orf168ENSG00000187889.8222.6242039.044602.5113011.078509.90960HepG2DKC1
C1orf168ENSG00000187889.8138.3656058.503001.241804.622903.45570HepG2EEF2
C1orf168ENSG00000187889.8109.2270055.412500.978903.501202.30350HepG2EIF3G
C1orf168ENSG00000187889.8144.1800036.981001.9629011.271609.30690HepG2ESF1
C1orf168ENSG00000187889.8203.30180112.017600.859804.609703.86920HepG2ETF1
C1orf168ENSG00000187889.841.9876094.16280-1.165203.574502.79470HepG2FXR1
C1orf168ENSG00000187889.839.1014087.38120-1.160103.439702.70180HepG2G3BP1
C1orf168ENSG00000187889.8198.6543092.725401.099105.834904.53230HepG2G3BP2
C1orf168ENSG00000187889.8327.4127041.391002.9836034.1776032.22310HepG2GPKOW
C1orf168ENSG00000187889.825.9514064.00610-1.302403.069001.40470HepG2GTF2F1
C1orf168ENSG00000187889.8211.8798038.835602.4477010.358909.22770HepG2HNRNPA1
C1orf168ENSG00000187889.888.9435043.200701.041702.765902.07280HepG2HNRNPC
C1orf168ENSG00000187889.846.5927088.40820-0.924102.311801.66990HepG2HNRNPK
C1orf168ENSG00000187889.838.2663070.71220-0.885902.140901.53800HepG2HNRNPL
C1orf168ENSG00000187889.8211.4677039.499802.4204019.4423018.00190HepG2HNRNPLL
C1orf168ENSG00000187889.871.8361042.914800.743101.830001.32740HepG2HNRNPU
C1orf168ENSG00000187889.897.1529047.246701.039903.630902.81050HepG2IGF2BP1
C1orf168ENSG00000187889.823.7572057.48200-1.274702.628001.52230HepG2LARP7
C1orf168ENSG00000187889.865.0454034.917600.897402.179301.45620HepG2MSI2
C1orf168ENSG00000187889.893.9498040.275001.221903.055402.03390HepG2MTPAP
C1orf168ENSG00000187889.8162.0967096.971700.741102.641602.02110HepG2NCBP2
C1orf168ENSG00000187889.816.3984076.98220-2.231008.226106.93340HepG2NOL12
C1orf168ENSG00000187889.8104.8356035.020901.581705.835104.77280HepG2NSUN2
C1orf168ENSG00000187889.819.2767042.47420-1.139702.077001.33440HepG2PARN
C1orf168ENSG00000187889.8173.2525040.373402.1013012.4380010.89770HepG2PRPF8
C1orf168ENSG00000187889.8148.2487073.491601.012304.741803.98700HepG2PUF60
C1orf168ENSG00000187889.828.0018078.02090-1.478304.883504.14080HepG2PUM1
C1orf168ENSG00000187889.8123.3705041.564701.569508.463707.48680HepG2PUS1
C1orf168ENSG00000187889.821.8334062.04120-1.506702.967102.23850HepG2RAVER1
C1orf168ENSG00000187889.8135.3428056.282201.265805.059203.61540HepG2RCC2
C1orf168ENSG00000187889.8168.2404089.034800.918004.424003.66790HepG2RECQL
C1orf168ENSG00000187889.8168.6608051.682001.7063010.737209.54180HepG2RPLP0
C1orf168ENSG00000187889.887.0234046.211400.913102.407501.82930HepG2RPS19
C1orf168ENSG00000187889.8127.5251063.929400.996103.799002.86520HepG2RPS2
C1orf168ENSG00000187889.8179.6389024.432402.8781020.1292018.05750HepG2RPS3A
C1orf168ENSG00000187889.817.5856038.21560-1.119801.844601.30180HepG2SAFB2
C1orf168ENSG00000187889.890.4953046.363100.964802.701901.77490HepG2SERBP1
C1orf168ENSG00000187889.8153.4491094.749300.695502.208601.60520HepG2SF3A3
C1orf168ENSG00000187889.886.9864039.099501.153503.315002.54940HepG2SF3B1
C1orf168ENSG00000187889.832.8970063.26860-0.943502.153101.31880HepG2SMNDC1
C1orf168ENSG00000187889.8244.7690093.344801.3907011.0368010.22880HepG2SRSF1
C1orf168ENSG00000187889.829.3923072.56980-1.303903.659802.95830HepG2SRSF5
C1orf168ENSG00000187889.8456.2557091.797402.3132046.0898044.61720HepG2SSB
C1orf168ENSG00000187889.891.2355028.822201.662306.696904.88350HepG2STAU1
C1orf168ENSG00000187889.8116.9393052.104601.166203.422702.68050HepG2SUPV3L1
C1orf168ENSG00000187889.8232.2945083.903601.4690012.1966011.14800HepG2TAF15
C1orf168ENSG00000187889.8113.3424038.488301.558106.494105.44540HepG2TARDBP
C1orf168ENSG00000187889.8130.9158039.628301.723906.327704.78890HepG2TBRG4
C1orf168ENSG00000187889.8257.3469041.687302.6259030.1481028.82300HepG2TIAL1
C1orf168ENSG00000187889.89.6202030.77890-1.677802.595001.86080HepG2UCHL5
C1orf168ENSG00000187889.8136.4924084.026900.699802.562101.88610HepG2UPF1
C1orf168ENSG00000187889.8108.7227047.708501.188203.324902.22030HepG2UPF2
C1orf168ENSG00000187889.8167.0154051.291301.703108.352507.10620HepG2XRN2
C1orf168ENSG00000187889.886.5128047.191100.874302.531501.88410HepG2ZC3H8
C1orf168ENSG00000187889.843.1384092.41530-1.099202.486001.95940HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C1orf168 is not available on ENCORE database.





1 RBPs can affect the splicing of C1orf168 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC1orf168ENSG00000187889.8chr1-5720275957202820571921695719225657206369572064680.845000.003520.08080includedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C1orf168 is not avaliable on ENCORE database.