C15orf57

General Information

Gene Name       : C15orf57
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C15orf57)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C15orf57 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C15orf57 RNA is bound by 10 proteins.  







eCLIP assay for C15orf57 is not avaliable on ENCORE database.





10 proteins are bound to C15orf57 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr154084565540845696-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.501964.18952HepG2SUB1
chr154084539840845460-3'-UTR,intron-Distal4.6456831.33388K562PUM2
chr154084941640849556-3'-UTR,CDS,intron-Distal3.815863.38114HepG2GRWD1
chr154084574140845783-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.994713.81167HepG2SUB1
chr154084606740846139-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.2759215.56954K562AGGF1
chr154084567640845790-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.862456.40324K562UPF1
chr154084604240846078-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.403145.05215K562HNRNPL
chr154084586440846025-3'-UTR,5'-UTR,intron-Distal5.2193810.53026K562HNRNPL
chr154085710840857175-5'-UTR,intron-Distal4.932624.48002K562AQR
chr154085714040857196-5'-UTR,intron-Distal,intron-Proximal3.375015.13777HepG2PRPF8
chr154083196740832063-intron-Distal4.715655.54597K562TARDBP
chr154083197040832081-intron-Distal3.539456.44829K562EIF4G2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C15orf57 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C15orf57 is not available on ENCORE database.

  • 52 RBPs can affect the levels of C15orf57.  








The Knockdown/knockout RNA-Seq assay for C15orf57 is not available on ENCORE database.





52 RBPs can affect the gene expression of C15orf57 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C15orf57ENSG00000128891.11358.59800167.647801.0968012.5905011.49440HepG2ACO1
C15orf57ENSG00000128891.11590.92570354.486800.737105.038804.34760HepG2AKAP1
C15orf57ENSG00000128891.11280.43470168.449200.735305.248304.22310HepG2AKAP8L
C15orf57ENSG00000128891.11280.27270169.775700.723103.525602.51430HepG2BCLAF1
C15orf57ENSG00000128891.11293.47380188.087900.641703.658602.78860HepG2CALR
C15orf57ENSG00000128891.11419.93660275.013100.610603.113902.07600HepG2CCAR1
C15orf57ENSG00000128891.11254.63800167.628000.603103.714302.96490HepG2CKAP4
C15orf57ENSG00000128891.11360.79640214.015000.753403.544302.67210HepG2CNOT7
C15orf57ENSG00000128891.11235.08840162.023600.536902.220301.60540HepG2DDX21
C15orf57ENSG00000128891.11219.97120160.397800.455601.918301.33870HepG2DKC1
C15orf57ENSG00000128891.11219.89580142.172600.629103.790103.04960HepG2DNAJC2
C15orf57ENSG00000128891.11194.01510309.93820-0.675803.383202.67800HepG2EIF4A3
C15orf57ENSG00000128891.11199.89930301.72350-0.594002.311101.67970HepG2EIF4B
C15orf57ENSG00000128891.11212.75680352.28650-0.727505.689004.87870HepG2ETF1
C15orf57ENSG00000128891.11373.65160219.296100.768703.876102.97750HepG2FIP1L1
C15orf57ENSG00000128891.11178.65690108.184200.723602.682301.79920HepG2GEMIN5
C15orf57ENSG00000128891.11143.99010255.45290-0.827106.096705.13050HepG2HNRNPL
C15orf57ENSG00000128891.11415.00690294.853100.493002.663801.99970HepG2IGF2BP2
C15orf57ENSG00000128891.11404.18510290.338600.477202.151101.42680HepG2LARP4
C15orf57ENSG00000128891.11252.83810177.448700.510702.201501.47440HepG2MSI2
C15orf57ENSG00000128891.11371.26070271.592300.450902.917902.29820HepG2PCBP1
C15orf57ENSG00000128891.11281.68410148.204900.926405.450704.35750HepG2PRPF8
C15orf57ENSG00000128891.11363.13440276.356300.393902.439801.92060HepG2PTBP1
C15orf57ENSG00000128891.11359.10860170.762501.0723012.0918010.96030HepG2PUS1
C15orf57ENSG00000128891.11275.20650191.212000.525202.638801.79910HepG2RBM15
C15orf57ENSG00000128891.11571.33910294.443400.9563012.3845011.44880HepG2RBM22
C15orf57ENSG00000128891.11175.88130118.223700.573002.126501.58060HepG2RPS19
C15orf57ENSG00000128891.11376.82610200.742400.908505.968804.95510HepG2SF3A3
C15orf57ENSG00000128891.11248.19260166.149200.578903.426102.72330HepG2SMN1
C15orf57ENSG00000128891.11269.87140180.629200.579102.484001.58010HepG2SMNDC1
C15orf57ENSG00000128891.11471.06240287.832200.710602.433901.70270HepG2SNRNP70
C15orf57ENSG00000128891.11488.90550332.557900.555905.060304.44060HepG2SRFBP1
C15orf57ENSG00000128891.11404.76180288.730100.487303.544102.97990HepG2SSB
C15orf57ENSG00000128891.11277.74820191.232600.538302.139601.53490HepG2SUPV3L1
C15orf57ENSG00000128891.11158.58920269.94030-0.767305.052604.33230HepG2TAF15
C15orf57ENSG00000128891.11238.19390155.441200.615703.165602.63650HepG2TIAL1
C15orf57ENSG00000128891.11327.23150178.026500.878107.500906.44350HepG2UPF1
C15orf57ENSG00000128891.11288.76390171.879600.748403.554402.89110HepG2UTP3
C15orf57ENSG00000128891.11262.08820179.688600.544503.130802.42390HepG2ZC3H8
C15orf57ENSG00000128891.11522.20660195.796901.4152018.7369017.62720HepG2ZNF622
C15orf57ENSG00000128891.11781.88640657.114000.250701.785601.30930K562AGGF1
C15orf57ENSG00000128891.11595.66120813.28820-0.449304.235202.84510K562CPEB4
C15orf57ENSG00000128891.111517.922401205.536000.332302.842401.85590K562CELF1
C15orf57ENSG00000128891.11597.44610841.71210-0.494505.787004.89560K562DDX47
C15orf57ENSG00000128891.11571.44040737.32440-0.367703.053402.30430K562EIF2S2
C15orf57ENSG00000128891.11966.24900674.915700.517604.688703.56330K562FIP1L1
C15orf57ENSG00000128891.11514.41860746.21900-0.536704.356703.28270K562FMR1
C15orf57ENSG00000128891.11390.23470632.47730-0.696705.738704.36980K562FTO
C15orf57ENSG00000128891.11606.21020466.711600.377202.907902.29000K562FXR1
C15orf57ENSG00000128891.11352.92380505.16570-0.517403.441002.78580K562HNRNPC
C15orf57ENSG00000128891.11465.62230683.51920-0.553804.702003.54040K562METAP2
C15orf57ENSG00000128891.11737.80360575.713600.357802.299501.41170K562PCBP2
C15orf57ENSG00000128891.11847.18300643.157300.397403.158002.29830K562POLR2G
C15orf57ENSG00000128891.11804.23290660.705800.283501.990801.47290K562RBM15
C15orf57ENSG00000128891.11625.70660778.49380-0.315202.744802.02900K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C15orf57 is not available on ENCORE database.





6 RBPs can affect the splicing of C15orf57 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC15orf57ENSG00000128891.11chr15-408457934084632640823529408245014084941440849571-0.557000.000000.00000excludedK562SRSF1
SEC15orf57ENSG00000128891.11chr15-4084579340846326408235294082450140849414408495710.093000.001390.01865includedHepG2U2AF2
SEC15orf57ENSG00000128891.11chr15-4084579340846326408235294082450140849414408495710.087000.000040.01451includedK562LARP4
SEC15orf57ENSG00000128891.11chr15-408457934084632640823529408245014084941440849589-0.407000.003070.06116excludedHepG2SRSF1
SEC15orf57ENSG00000128891.11chr15-408457934084632640823529408245014084941440849589-0.490000.000550.02878excludedHepG2SF3B4
SEC15orf57ENSG00000128891.11chr15-408457934084632640823529408245014084941440849589-0.333000.000000.00049excludedK562HNRNPU
SEC15orf57ENSG00000128891.11chr15-408457934084632640823529408245014084941440849589-0.557000.000000.00001excludedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C15orf57 is not avaliable on ENCORE database.