C11orf57

General Information

Gene Name       : C11orf57
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C11orf57)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C11orf57 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C11orf57 RNA is bound by 8 proteins.  







eCLIP assay for C11orf57 is not avaliable on ENCORE database.





8 proteins are bound to C11orf57 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11111952557111952667+3'-UTR,intron-Distal,intron-Proximal4.095833.89294K562KHSRP
chr11111951176111951297+3'-UTR,CDS,intron-Proximal3.624264.22563K562UCHL5
chr11111951124111951258+3'-UTR,CDS,intron-Proximal4.802114.90367K562ZNF622
chr11111951125111951279+3'-UTR,CDS,intron-Proximal3.422596.20035HepG2BCLAF1
chr11111953185111953223+3'-UTR,CDS,intron-Proximal4.241303.89826HepG2BCLAF1
chr11111954792111954854+3'-UTR4.210284.51688K562YBX3
chr11111954767111954843+3'-UTR4.186953.47885K562LIN28B
chr11111945197111945251+5'-UTR,intron-Distal4.941274.75034HepG2XPO5
chr11111945076111945284+5'-UTR,intron-Distal,intron-Proximal3.484196.73521K562DDX3X
chr11111948995111949043+CDS,intron-Distal,intron-Proximal4.026883.02457HepG2BCLAF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C11orf57 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C11orf57 is not available on ENCORE database.

  • 68 RBPs can affect the levels of C11orf57.  








The Knockdown/knockout RNA-Seq assay for C11orf57 is not available on ENCORE database.





68 RBPs can affect the gene expression of C11orf57 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C11orf57ENSG00000150776.13625.94830413.978900.596402.495701.47330HepG2AATF
C11orf57ENSG00000150776.13594.867601080.96050-0.861705.403204.68920HepG2AKAP1
C11orf57ENSG00000150776.13664.55340962.23240-0.534007.044406.02980HepG2AUH
C11orf57ENSG00000150776.13731.576101203.40470-0.718005.528104.12690HepG2CCAR1
C11orf57ENSG00000150776.13634.21600849.77610-0.422101.962901.30600HepG2CIRBP
C11orf57ENSG00000150776.13683.89060896.23270-0.390102.690702.01120HepG2CPSF6
C11orf57ENSG00000150776.13633.32680749.88050-0.243702.044801.39350HepG2DAZAP1
C11orf57ENSG00000150776.13638.84170513.512300.315002.739601.90930HepG2DDX19B
C11orf57ENSG00000150776.13370.63220488.40350-0.398102.578101.46140HepG2DDX1
C11orf57ENSG00000150776.13480.45150889.34060-0.888305.786404.92210HepG2DDX6
C11orf57ENSG00000150776.13470.29910855.18970-0.862705.419604.60740HepG2EIF2S1
C11orf57ENSG00000150776.13440.70080884.52550-1.005106.813105.78830HepG2G3BP1
C11orf57ENSG00000150776.13334.92530478.47500-0.514602.385701.35110HepG2GRSF1
C11orf57ENSG00000150776.13715.80020969.47920-0.437702.013501.46760HepG2HNRNPLL
C11orf57ENSG00000150776.13331.76470534.24820-0.687307.890206.90630HepG2HNRNPU
C11orf57ENSG00000150776.13262.82190899.16800-1.7745013.8713012.49100HepG2IGF2BP2
C11orf57ENSG00000150776.13704.47250959.03920-0.445002.168301.60640HepG2MATR3
C11orf57ENSG00000150776.13716.43660981.67740-0.454402.180701.61630HepG2NCBP2
C11orf57ENSG00000150776.131067.23280859.679300.311902.021201.37720HepG2NSUN2
C11orf57ENSG00000150776.13598.71140874.46560-0.546502.588701.88790HepG2PABPC4
C11orf57ENSG00000150776.13351.96240587.44270-0.739003.195502.08160HepG2PCBP2
C11orf57ENSG00000150776.13274.74900699.52410-1.3483028.9775026.99570HepG2PRPF4
C11orf57ENSG00000150776.13626.75870885.22250-0.498105.879905.14230HepG2PTBP1
C11orf57ENSG00000150776.13576.30650752.90890-0.385603.151002.43500HepG2PUM2
C11orf57ENSG00000150776.13617.31960958.83490-0.635305.190604.37470HepG2QKI
C11orf57ENSG00000150776.13562.32870923.40570-0.7156010.626809.75640HepG2RBM22
C11orf57ENSG00000150776.13683.15840870.16010-0.349102.710402.04190HepG2RBM25
C11orf57ENSG00000150776.13373.84080550.12160-0.557302.469001.46770HepG2RCC2
C11orf57ENSG00000150776.13715.21590985.21330-0.462105.117104.41790HepG2NELFE
C11orf57ENSG00000150776.13403.71490554.79970-0.458603.313802.62090HepG2SMN1
C11orf57ENSG00000150776.13753.17550905.49740-0.265702.370001.88770HepG2SSB
C11orf57ENSG00000150776.13646.92590794.57960-0.296602.167301.42570HepG2TIA1
C11orf57ENSG00000150776.13906.37710681.326300.411702.777602.14740HepG2U2AF1
C11orf57ENSG00000150776.13484.03720681.13420-0.492805.361504.43960HepG2UPF1
C11orf57ENSG00000150776.13725.393501124.28200-0.6322010.493209.48080K562AGGF1
C11orf57ENSG00000150776.13372.29110598.52620-0.685008.449205.84270K562AKAP1
C11orf57ENSG00000150776.131002.327901235.34710-0.301602.252801.37780K562AKAP8
C11orf57ENSG00000150776.13612.167801169.84940-0.9343014.6339012.93560K562AKAP8L
C11orf57ENSG00000150776.132441.012501785.294200.451204.625103.90140K562AQR
C11orf57ENSG00000150776.13870.457801058.57900-0.282302.655901.71700K562BCLAF1
C11orf57ENSG00000150776.131369.298501808.43160-0.401302.108101.41460K562CPSF6
C11orf57ENSG00000150776.131073.958201294.90400-0.269902.834001.60900K562DDX21
C11orf57ENSG00000150776.13448.74310606.39990-0.434403.341402.18230K562DDX3X
C11orf57ENSG00000150776.132380.297002027.471900.231402.775402.12350K562DDX47
C11orf57ENSG00000150776.13810.41760525.095300.626005.866103.92360K562DNAJC21
C11orf57ENSG00000150776.13624.55060867.62040-0.474202.591601.35570K562EEF2
C11orf57ENSG00000150776.13610.40690897.63700-0.556403.831302.59150K562EIF3D
C11orf57ENSG00000150776.131143.84070658.814200.7958014.6324013.35340K562FXR1
C11orf57ENSG00000150776.131060.13410710.502800.577204.072303.17320K562G3BP2
C11orf57ENSG00000150776.131518.539001884.96500-0.311902.607401.87230K562GRSF1
C11orf57ENSG00000150776.13927.509101171.38240-0.336803.269602.30140K562HNRNPU
C11orf57ENSG00000150776.13401.59620907.34510-1.1759014.3792011.58920K562IGF2BP2
C11orf57ENSG00000150776.13850.652801241.56190-0.545505.218004.01340K562KIF1C
C11orf57ENSG00000150776.131217.47460953.522900.352503.124902.23100K562MAGOH
C11orf57ENSG00000150776.13900.550901188.43220-0.400203.173201.99830K562MAK16
C11orf57ENSG00000150776.131107.976501384.26810-0.321203.887402.94310K562MTPAP
C11orf57ENSG00000150776.13634.97710974.88320-0.618504.361003.17800K562NAA15
C11orf57ENSG00000150776.132817.347402264.616300.315003.109901.52120K562NOL12
C11orf57ENSG00000150776.131271.237701538.09800-0.274903.984303.10810K562NSUN2
C11orf57ENSG00000150776.13464.684501620.21020-1.801903.610102.43760K562PABPN1
C11orf57ENSG00000150776.131125.98780815.781500.464802.985202.20660K562PRPF8
C11orf57ENSG00000150776.131247.96450926.411800.429804.485303.66000K562PTBP1
C11orf57ENSG00000150776.132981.369402259.109000.400102.694301.88830K562PUF60
C11orf57ENSG00000150776.132905.767902402.554700.274303.192902.04260K562PUM1
C11orf57ENSG00000150776.13712.452601160.29080-0.703608.508907.60480K562PUS1
C11orf57ENSG00000150776.13638.511401130.42820-0.8241014.5116013.14240K562RBM15
C11orf57ENSG00000150776.131135.49680907.410000.323402.473301.45300K562SAFB
C11orf57ENSG00000150776.13530.968801482.50840-1.481302.659901.49050K562SF1
C11orf57ENSG00000150776.131324.609601554.84100-0.231202.629201.71320K562SRPK2
C11orf57ENSG00000150776.13674.40980857.74280-0.346902.345101.39210K562SRSF5
C11orf57ENSG00000150776.13957.925001155.68180-0.270802.710201.55720K562SRSF7
C11orf57ENSG00000150776.131729.396301021.466400.7595014.3288012.46100K562SYNCRIP
C11orf57ENSG00000150776.13644.64320870.07320-0.432603.314802.10010K562TRA2A
C11orf57ENSG00000150776.131271.098001630.87380-0.359605.319304.35780K562UPF1
C11orf57ENSG00000150776.13751.534501176.29140-0.646303.012501.64380K562UTP18
C11orf57ENSG00000150776.131008.469101395.49390-0.468605.201903.98330K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C11orf57 is not available on ENCORE database.





4 RBPs can affect the splicing of C11orf57 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC11orf57ENSG00000150776.13chr11+111945470111945640111945033111945082111946290111946367-0.316000.000270.00862excludedHepG2SRSF1
SEC11orf57ENSG00000150776.13chr11+1119474491119476091119462901119463671119489381119490390.214000.000000.00890includedHepG2RBM5
A3SSC11orf57ENSG00000150776.13chr11+1119511111119512821119511321119512821119489381119490390.067000.000000.00003longerK562AQR
A5SSC11orf57ENSG00000150776.13chr11+1119462531119464081119462531119463671119489381119491400.185000.000000.00004longerK562AQR
A5SSC11orf57ENSG00000150776.13chr11+1119489381119491401119489381119490391119511321119531510.093000.000000.00000longerK562AQR
A5SSC11orf57ENSG00000150776.13chr11+111946290111946408111946290111946367111948938111949039-0.133000.000070.02713shorterHepG2TBRG4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C11orf57 is not avaliable on ENCORE database.