B4GALT4

General Information

Gene Name       : B4GALT4
Gene ID             : ENSG00000121578.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: B4GALT4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878B4GALT4ENSG00000121578.128.165.997.08ENCSR000AEF
HepG2B4GALT4ENSG00000121578.1219.2824.2321.76ENCSR985KAT
K562B4GALT4ENSG00000121578.126.386.776.57ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for B4GALT4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • B4GALT4 RNA is bound by 3 proteins.  







eCLIP assay for B4GALT4 is not avaliable on ENCORE database.





3 proteins are bound to B4GALT4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3118930922118931047-3'-UTR,CDS,intron-Distal3.304513.54552HepG2LARP4
chr3118948834118948889-5'-UTR,CDS,intron-Distal,intron-Proximal3.843633.28989K562RBM15
chr3118942863118942935-CDS,intron-Distal,intron-Proximal3.866777.26133HepG2PRPF8
chr3118937521118937584-CDS,intron-Distal,intron-Proximal4.709024.35676HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for B4GALT4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for B4GALT4 is not available on ENCORE database.

  • 63 RBPs can affect the levels of B4GALT4.  








The Knockdown/knockout RNA-Seq assay for B4GALT4 is not available on ENCORE database.





63 RBPs can affect the gene expression of B4GALT4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
B4GALT4ENSG00000121578.8515.33660713.63960-0.469702.244101.39170HepG2ABCF1
B4GALT4ENSG00000121578.8453.20300664.14970-0.551406.591805.73480HepG2ACO1
B4GALT4ENSG00000121578.8528.48650667.24040-0.336302.732801.97010HepG2AKAP8L
B4GALT4ENSG00000121578.8709.41530974.50470-0.458003.233402.38440HepG2ASCC1
B4GALT4ENSG00000121578.8283.65960597.12570-1.0739012.6002011.44570HepG2BOP1
B4GALT4ENSG00000121578.81183.21570925.836500.353802.401001.67520HepG2CIRBP
B4GALT4ENSG00000121578.8557.19350663.96970-0.252901.921101.35310HepG2CKAP4
B4GALT4ENSG00000121578.8328.47160548.17970-0.738906.087905.10220HepG2CPSF6
B4GALT4ENSG00000121578.8508.75260614.22690-0.271802.152301.40970HepG2DDX19B
B4GALT4ENSG00000121578.8779.23070610.672100.351602.277001.65400HepG2DDX21
B4GALT4ENSG00000121578.8358.68880601.94560-0.746902.875802.08900HepG2DDX55
B4GALT4ENSG00000121578.8372.46030529.24200-0.506805.173204.32620HepG2DNAJC2
B4GALT4ENSG00000121578.8337.88200931.70600-1.4634022.2434020.67060HepG2EIF2S1
B4GALT4ENSG00000121578.8631.303001002.43280-0.667104.548903.67880HepG2EIF4B
B4GALT4ENSG00000121578.8439.70630648.96120-0.561604.940403.82700HepG2EWSR1
B4GALT4ENSG00000121578.8683.594001038.71570-0.603605.294904.35810HepG2FXR1
B4GALT4ENSG00000121578.8560.45800963.68160-0.782007.675506.59440HepG2G3BP1
B4GALT4ENSG00000121578.8873.06060595.632500.551607.266506.32050HepG2HNRNPU
B4GALT4ENSG00000121578.8755.708801039.07730-0.459403.278102.56440HepG2MAGOH
B4GALT4ENSG00000121578.8642.153001044.93010-0.702406.105305.19530HepG2MATR3
B4GALT4ENSG00000121578.8729.42140583.422900.322102.194101.46840HepG2MSI2
B4GALT4ENSG00000121578.8784.45370946.88280-0.271502.104201.43690HepG2NOL12
B4GALT4ENSG00000121578.8793.56630525.822000.593704.844903.86560HepG2NSUN2
B4GALT4ENSG00000121578.8702.27310429.446300.709503.796702.74290HepG2PABPC1
B4GALT4ENSG00000121578.8265.58040589.56310-1.1505019.1735017.32520HepG2PARN
B4GALT4ENSG00000121578.8683.81030902.76500-0.400804.351903.62010HepG2PCBP1
B4GALT4ENSG00000121578.8395.47510526.49530-0.412803.322002.48170HepG2PRPF4
B4GALT4ENSG00000121578.8516.91600918.59780-0.8295014.5231013.46130HepG2PTBP1
B4GALT4ENSG00000121578.8648.64290959.48090-0.564809.596808.63170HepG2PUM1
B4GALT4ENSG00000121578.8301.94470628.85310-1.058406.704905.63320HepG2RAVER1
B4GALT4ENSG00000121578.8643.055901022.31060-0.6688010.420809.49390HepG2NELFE
B4GALT4ENSG00000121578.8724.63210952.14450-0.393904.211503.47250HepG2RECQL
B4GALT4ENSG00000121578.8298.83480425.62750-0.510203.204602.54920HepG2RPS19
B4GALT4ENSG00000121578.8810.24210586.914700.465103.272002.51060HepG2SF3B1
B4GALT4ENSG00000121578.8719.23330956.37770-0.411104.458303.73520HepG2SF3B4
B4GALT4ENSG00000121578.8416.81830618.56440-0.569506.840305.89870HepG2SMN1
B4GALT4ENSG00000121578.8823.532101020.04870-0.308703.313402.78080HepG2SRFBP1
B4GALT4ENSG00000121578.8831.28890998.25170-0.264102.287501.84680HepG2SRSF1
B4GALT4ENSG00000121578.8377.66870631.58600-0.741905.142803.74030HepG2SRSF3
B4GALT4ENSG00000121578.8598.62590892.41990-0.576107.953406.96350HepG2SRSF5
B4GALT4ENSG00000121578.8404.56510537.60280-0.410203.364102.60710HepG2SRSF7
B4GALT4ENSG00000121578.8576.44020812.13140-0.494506.215605.44740HepG2SRSF9
B4GALT4ENSG00000121578.8870.770201014.94350-0.221002.027801.47910HepG2SUCLG1
B4GALT4ENSG00000121578.8441.68530578.73500-0.389902.765902.26510HepG2TIAL1
B4GALT4ENSG00000121578.81008.81350616.567600.710207.491506.46400HepG2U2AF1
B4GALT4ENSG00000121578.8365.28890632.47100-0.7920010.713909.65880HepG2UTP3
B4GALT4ENSG00000121578.8411.80080519.60940-0.335502.527701.88060HepG2ZC3H8
B4GALT4ENSG00000121578.8360.60590720.48170-0.9985020.3822019.23550HepG2ZNF622
B4GALT4ENSG00000121578.8568.62240367.879800.628106.261305.46040K562AGGF1
B4GALT4ENSG00000121578.8541.82640404.212200.422602.390901.48730K562AKAP8
B4GALT4ENSG00000121578.8594.33950382.787700.634605.250204.33770K562AKAP8L
B4GALT4ENSG00000121578.8568.36000401.621500.500904.181003.03710K562ATP5C1
B4GALT4ENSG00000121578.878.69690136.46090-0.794102.787101.73000K562CCAR1
B4GALT4ENSG00000121578.8304.90680384.32040-0.333901.907401.34760K562DDX47
B4GALT4ENSG00000121578.8199.16570341.07130-0.776103.255401.92810K562EIF2S1
B4GALT4ENSG00000121578.8180.18570260.32370-0.530802.483401.72880K562EIF3G
B4GALT4ENSG00000121578.8179.39790253.11370-0.496602.047101.52270K562HNRNPC
B4GALT4ENSG00000121578.8445.11450346.830100.359802.222701.42320K562HNRNPU
B4GALT4ENSG00000121578.8628.06370406.261100.628405.184903.98470K562KIF1C
B4GALT4ENSG00000121578.8306.08100399.73330-0.385102.168201.36110K562MATR3
B4GALT4ENSG00000121578.8656.85080455.111200.529203.788002.69500K562MBNL1
B4GALT4ENSG00000121578.8275.85620389.16750-0.496503.273302.55690K562PTBP1
B4GALT4ENSG00000121578.8661.28990379.676800.800407.218806.38880K562PUS1
B4GALT4ENSG00000121578.8550.48320369.891100.573504.871904.10560K562RBM15
B4GALT4ENSG00000121578.8133.22560206.95780-0.635502.434401.50850K562RCC2
B4GALT4ENSG00000121578.8172.27520309.57230-0.845604.634303.29500K562RPS3
B4GALT4ENSG00000121578.8285.49160381.51990-0.418302.265501.61690K562SRSF1
B4GALT4ENSG00000121578.8200.62600298.88520-0.575102.911501.82190K562SRSF4
B4GALT4ENSG00000121578.8440.11210314.066400.486702.544101.50160K562U2AF1
B4GALT4ENSG00000121578.8422.58730324.374000.381502.264601.53890K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for B4GALT4 is not available on ENCORE database.





7 RBPs can affect the splicing of B4GALT4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEB4GALT4ENSG00000121578.8chr3-1189539911189540741189490021189490911189556991189559170.341000.000650.08801includedK562MATR3
SEB4GALT4ENSG00000121578.8chr3-118937496118937619118935086118935191118942904118943092-0.265000.000000.00001excludedHepG2U2AF1
SEB4GALT4ENSG00000121578.8chr3-118937496118937619118935086118935191118942904118943092-0.324000.000000.00000excludedHepG2U2AF2
SEB4GALT4ENSG00000121578.8chr3-1189592071189593771189556991189559171189596961189597540.280000.000000.00028includedHepG2DDX3X
SEB4GALT4ENSG00000121578.8chr3-1189592071189593771189556991189559171189596961189597540.161000.001470.07379includedHepG2NCBP2
SEB4GALT4ENSG00000121578.8chr3-1189539911189540741189490021189490911189556991189559170.247000.000010.00104includedHepG2MATR3
A3SSB4GALT4ENSG00000121578.8chr3-1189429041189431251189429041189430921189456551189458880.134000.004480.02624longerK562AQR
A3SSB4GALT4ENSG00000121578.8chr3-1189457851189459541189457851189458881189486931189490910.171000.000010.00008longerK562AQR
MXEB4GALT4ENSG00000121578.8chr3-118948693118949091118955699118955917118945655118945888118959696118959725-0.144000.000310.014592includedHepG2TAF15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for B4GALT4 is not avaliable on ENCORE database.