AP3S2

General Information

Gene Name       : AP3S2
Gene ID             : ENSG00000157823.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AP3S2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AP3S2ENSG00000157823.1617.8419.6118.73ENCSR000AEF
HepG2AP3S2ENSG00000157823.1616.8529.6223.23ENCSR985KAT
K562AP3S2ENSG00000157823.1622.4223.1422.78ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AP3S2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AP3S2 RNA is bound by 13 proteins.  







eCLIP assay for AP3S2 is not avaliable on ENCORE database.





13 proteins are bound to AP3S2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr159041475090414778-3'-UTR,5'-UTR,CDS,intron-Distal3.828133.02250K562YBX3
chr159037809490378132-3'-UTR,intron-Distal,intron-Proximal3.850123.34655HepG2AKAP1
chr159037783990377884-3'-UTR,intron-Distal3.975904.94392K562AKAP1
chr159037835390378438-3'-UTR,intron-Distal4.6142711.31667HepG2UPF1
chr159037848990378593-3'-UTR,intron-Distal,intron-Proximal5.7177613.82898HepG2UPF1
chr159037414790374187-3'-UTR,intron-Distal3.982616.14808K562UPF1
chr159037771790377773-3'-UTR,intron-Distal4.0919313.61678K562UPF1
chr159037808690378136-3'-UTR,intron-Distal,intron-Proximal5.052965.93974HepG2UPF1
chr159037778290377825-3'-UTR,intron-Distal4.4773812.41920K562UPF1
chr159037765190377707-3'-UTR,intron-Distal4.364418.73365HepG2UPF1
chr159037854090378612-3'-UTR,intron-Distal,intron-Proximal3.741585.03349HepG2AKAP1
chr159037764290377717-3'-UTR,intron-Distal4.4138522.86957K562UPF1
chr159038087790380955-3'-UTR,CDS,intron-Distal,intron-Proximal4.7244311.62373K562UPF1
chr159037774590377802-3'-UTR,intron-Distal4.534065.97422HepG2AKAP1
chr159037536390375453-3'-UTR,intron-Distal5.378668.05720K562UPF1
chr159037782990377889-3'-UTR,intron-Distal5.2426215.83369K562UPF1
chr159037854990378629-3'-UTR,intron-Distal,intron-Proximal3.6293411.04498K562UPF1
chr159037760990377700-3'-UTR,intron-Distal3.029683.75675K562IGF2BP2
chr159037847390378524-3'-UTR,intron-Distal5.6860111.61633K562UPF1
chr159037835890378445-3'-UTR,intron-Distal5.3285910.25462HepG2AKAP1
chr159037833690378405-3'-UTR,intron-Distal3.3371411.13067K562UPF1
chr159037824290378325-3'-UTR,intron-Distal4.274718.75828HepG2AKAP1
chr159037808690378136-3'-UTR,intron-Distal,intron-Proximal3.4449815.59037K562UPF1
chr159037817790378311-3'-UTR,intron-Distal,intron-Proximal6.4454640.61271K562UPF1
chr159037788990377957-3'-UTR,intron-Distal3.8492111.88509K562UPF1
chr159037686690376889-3'-UTR,intron-Distal3.837854.82552K562UPF1
chr159037820990378332-3'-UTR,intron-Distal,intron-Proximal6.0194415.42180HepG2UPF1
chr159037608090376111-3'-UTR,intron-Distal4.979487.21253K562UPF1
chr159037533990375420-3'-UTR,intron-Distal3.607423.66583K562AKAP1
chr159037405790374170-3'-UTR,intron-Distal5.7410211.01056K562FAM120A
chr159043175090431781-5'-UTR,CDS,intron-Distal,intron-Proximal4.063613.89948K562YBX3
chr159043227990432374-5'-UTR,CDS,intron-Distal,intron-Proximal3.334644.99842HepG2PPIG
chr159043228090432370-5'-UTR,CDS,intron-Distal,intron-Proximal3.140387.65028K562YBX3
chr159043234690432445-CDS,intron-Distal,intron-Proximal3.013686.47001K562SF3B4
chr159043706690437128-CDS,intron-Distal3.324335.50267HepG2PRPF8
chr159040669190406795-intron-Distal3.656314.81844HepG2SUGP2
chr159040670690406801-intron-Distal4.294034.40847HepG2PTBP1
chr159041976290419833-intron-Distal3.997385.93532K562PTBP1
chr159043700590437063-intron-Distal3.127143.18246K562PRPF8
chr159041015790410221-intron-Distal4.119673.71028HepG2NKRF
chr159040617290406257-intron-Distal4.640753.96879HepG2MATR3
chr159040529590405361-intron-Distal3.138503.10640HepG2SUGP2
chr159040670690406808-intron-Distal3.557714.72029K562MATR3
chr159041976190419824-intron-Distal3.688584.48652HepG2PTBP1
chr159042308590423143-intron-Distal4.304664.95918HepG2ILF3
chr159040493690405019-intron-Distal3.644495.56133HepG2SUGP2
chr159042033790420437-intron-Distal4.070303.09122HepG2PTBP1
chr159040674590406808-intron-Distal4.893085.43236K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AP3S2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AP3S2 is not available on ENCORE database.

  • 80 RBPs can affect the levels of AP3S2.  








The Knockdown/knockout RNA-Seq assay for AP3S2 is not available on ENCORE database.





80 RBPs can affect the gene expression of AP3S2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AP3S2ENSG00000157823.121201.85590920.903400.384002.491801.59690HepG2ABCF1
AP3S2ENSG00000157823.121065.42780785.118600.440405.743404.92940HepG2ACO1
AP3S2ENSG00000157823.121071.16690525.339001.0278015.9681014.70030HepG2BOP1
AP3S2ENSG00000157823.12948.00950784.776000.272502.486901.84940HepG2CKAP4
AP3S2ENSG00000157823.12687.09580482.288400.510503.629302.85250HepG2CPSF6
AP3S2ENSG00000157823.12749.37140597.341600.327002.574801.45870HepG2DDX1
AP3S2ENSG00000157823.122143.335401659.756500.368802.789302.16080HepG2DDX3X
AP3S2ENSG00000157823.12947.80640651.448600.540803.693202.81320HepG2DDX55
AP3S2ENSG00000157823.121027.92960800.288200.361102.498501.53370HepG2DDX5
AP3S2ENSG00000157823.12918.86460751.101300.290702.501901.85270HepG2DKC1
AP3S2ENSG00000157823.12715.19750585.726600.288002.061501.44490HepG2DNAJC21
AP3S2ENSG00000157823.12766.159201370.63170-0.839107.054806.13970HepG2EIF2S1
AP3S2ENSG00000157823.12534.63090698.68380-0.386102.681001.53240HepG2EIF2S2
AP3S2ENSG00000157823.121995.337101514.849200.397402.764902.12570HepG2EIF4A3
AP3S2ENSG00000157823.12805.373701474.65100-0.872608.000706.86080HepG2EIF4B
AP3S2ENSG00000157823.121058.97970767.048500.465204.540803.47510HepG2EWSR1
AP3S2ENSG00000157823.12764.54490483.118000.662102.348001.41890HepG2FTO
AP3S2ENSG00000157823.12633.31030878.71900-0.472502.546501.47400HepG2FUS
AP3S2ENSG00000157823.12875.637201527.99570-0.803208.095406.95880HepG2FXR1
AP3S2ENSG00000157823.121014.756501417.66290-0.482403.383602.65160HepG2G3BP1
AP3S2ENSG00000157823.12418.34230763.93170-0.868806.732305.12640HepG2GNB2L1
AP3S2ENSG00000157823.12952.75480546.707500.801207.822706.78210HepG2GPKOW
AP3S2ENSG00000157823.121134.02360657.755600.7857010.107808.85490HepG2HNRNPC
AP3S2ENSG00000157823.121344.03180982.203600.452407.208506.12140HepG2HNRNPF
AP3S2ENSG00000157823.12862.893601434.99180-0.733807.691606.57220HepG2HNRNPK
AP3S2ENSG00000157823.12772.98160521.733400.567004.415003.63590HepG2HNRNPLL
AP3S2ENSG00000157823.12441.66420641.67990-0.538904.371803.20220HepG2HNRNPM
AP3S2ENSG00000157823.12927.75040653.406800.505706.839505.92450HepG2HNRNPU
AP3S2ENSG00000157823.121147.95300967.198800.247101.917701.30630HepG2IGF2BP1
AP3S2ENSG00000157823.12760.624401441.10270-0.921909.009307.86940HepG2IGF2BP2
AP3S2ENSG00000157823.121044.399601449.35470-0.472702.961201.91750HepG2KHSRP
AP3S2ENSG00000157823.121275.84330873.211200.546903.904302.91390HepG2LARP4
AP3S2ENSG00000157823.12755.052701537.15110-1.0256011.087709.88520HepG2MATR3
AP3S2ENSG00000157823.12992.656301573.41570-0.664505.592804.70590HepG2NCBP2
AP3S2ENSG00000157823.12461.47530676.61340-0.552104.119202.37830HepG2NIP7
AP3S2ENSG00000157823.12906.40640598.197900.599402.750401.66130HepG2NONO
AP3S2ENSG00000157823.12670.18560462.619300.534603.738502.87020HepG2NSUN2
AP3S2ENSG00000157823.121076.804501447.22920-0.426504.002603.30040HepG2PCBP1
AP3S2ENSG00000157823.121230.04210729.034400.7545015.3765013.78730HepG2PRPF4
AP3S2ENSG00000157823.12956.835101472.50530-0.621907.002906.21260HepG2PTBP1
AP3S2ENSG00000157823.121537.31320885.625900.7955013.0859011.91950HepG2PUF60
AP3S2ENSG00000157823.12691.11930939.45560-0.442904.049303.24350HepG2PUM2
AP3S2ENSG00000157823.121267.257301594.98240-0.331802.505701.90610HepG2QKI
AP3S2ENSG00000157823.121216.58910919.821800.403304.149403.12430HepG2RBM15
AP3S2ENSG00000157823.121426.107801120.306600.348103.966303.37460HepG2RBM22
AP3S2ENSG00000157823.121109.348901638.84390-0.563005.539604.81630HepG2NELFE
AP3S2ENSG00000157823.12936.837001526.20280-0.704108.452907.46390HepG2RECQL
AP3S2ENSG00000157823.121793.535501057.944700.7614011.9218010.67690HepG2RPLP0
AP3S2ENSG00000157823.121140.15070788.518800.531903.030702.04370HepG2RPS10
AP3S2ENSG00000157823.12601.75630849.40010-0.497303.370402.18200HepG2RPS5
AP3S2ENSG00000157823.12735.81430581.886800.338503.135802.45870HepG2SAFB2
AP3S2ENSG00000157823.121342.08220981.338600.451602.566901.91700HepG2SF3A3
AP3S2ENSG00000157823.12924.10200516.410700.8394010.062808.79340HepG2SF3B1
AP3S2ENSG00000157823.121282.679301533.25550-0.257401.904901.39890HepG2SF3B4
AP3S2ENSG00000157823.12788.75440574.598300.456902.097101.42010HepG2SNRNP70
AP3S2ENSG00000157823.122021.065701265.356600.6755018.9618017.95790HepG2SRFBP1
AP3S2ENSG00000157823.121048.04430874.462500.261102.294101.71740HepG2SRSF5
AP3S2ENSG00000157823.121304.58400964.952800.435006.629105.62760HepG2SRSF7
AP3S2ENSG00000157823.121609.100701098.649200.5504011.2333010.33480HepG2SSB
AP3S2ENSG00000157823.121124.222601438.20900-0.355302.989402.40980HepG2TAF15
AP3S2ENSG00000157823.12607.08680434.672500.481902.565401.60180HepG2TFIP11
AP3S2ENSG00000157823.121028.358001321.74340-0.362102.261001.50320HepG2TIA1
AP3S2ENSG00000157823.12851.91660634.901700.424103.945903.37110HepG2TIAL1
AP3S2ENSG00000157823.12525.14110640.58270-0.286702.070501.56950HepG2TRIM56
AP3S2ENSG00000157823.12238.90820383.09410-0.681204.403803.44520HepG2UCHL5
AP3S2ENSG00000157823.121179.49610870.294800.438506.401905.41240HepG2UPF1
AP3S2ENSG00000157823.121600.68270957.161200.7418021.9947020.81370HepG2ZNF622
AP3S2ENSG00000157823.12587.91410761.58070-0.373402.514601.39490K562AARS
AP3S2ENSG00000157823.121897.299101560.452900.281902.309701.42390K562AKAP8
AP3S2ENSG00000157823.121770.895401477.625400.261102.021201.46090K562AKAP8L
AP3S2ENSG00000157823.12618.18590754.84210-0.288102.014101.32600K562EIF3G
AP3S2ENSG00000157823.121090.79500813.510600.423003.534102.61040K562EIF4A3
AP3S2ENSG00000157823.12923.22400710.091800.378602.648601.38900K562EWSR1
AP3S2ENSG00000157823.121057.10710853.978200.307802.117101.37160K562FIP1L1
AP3S2ENSG00000157823.121018.41510833.316200.289301.997301.47900K562HNRNPC
AP3S2ENSG00000157823.12937.297801186.80780-0.340502.792501.73170K562HNRNPL
AP3S2ENSG00000157823.121411.222801157.737900.285501.989001.30930K562HSPD1
AP3S2ENSG00000157823.12420.53370582.88200-0.471002.855501.33200K562ILF3
AP3S2ENSG00000157823.12658.642001004.79210-0.609307.284305.69400K562MATR3
AP3S2ENSG00000157823.121594.949401231.297000.373202.176301.41490K562NAA15
AP3S2ENSG00000157823.121070.85800812.382600.398403.660202.22590K562NCBP2
AP3S2ENSG00000157823.121264.76210749.432100.754903.520602.36410K562PABPN1
AP3S2ENSG00000157823.121201.10900969.511600.308902.193001.46660K562PPIG
AP3S2ENSG00000157823.121731.598302040.04150-0.236502.665601.72320K562PUM2
AP3S2ENSG00000157823.121711.765101427.798900.261602.606102.02820K562RBM15
AP3S2ENSG00000157823.121357.79190685.285400.986404.270802.68460K562SF1
AP3S2ENSG00000157823.121515.795401091.331000.473906.922705.67890K562SF3A3
AP3S2ENSG00000157823.121398.760801118.090400.323004.290703.15140K562SRPK2
AP3S2ENSG00000157823.121461.636601172.726200.317603.826402.99340K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AP3S2 is not available on ENCORE database.





1 RBPs can affect the splicing of AP3S2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAP3S2ENSG00000157823.12chr15-9042149690421532904205379042065690431752904318640.793000.003520.06757includedHepG2SRSF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AP3S2 is not avaliable on ENCORE database.