ANKRD13D

General Information

Gene Name       : ANKRD13D
Gene ID             : ENSG00000172932.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ANKRD13D)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ANKRD13DENSG00000172932.144.2212.528.37ENCSR000AEF
HepG2ANKRD13DENSG00000172932.1417.057.1912.12ENCSR985KAT
K562ANKRD13DENSG00000172932.1415.0410.6612.85ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ANKRD13D is not avaliable on ENCORE database.



Proteins bound to RNA
  • ANKRD13D RNA is bound by 22 proteins.  







eCLIP assay for ANKRD13D is not avaliable on ENCORE database.





22 proteins are bound to ANKRD13D RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr116706969367069812+3'-UTR,CDS3.745304.02339HepG2PABPN1
chr116706986467069935+3'-UTR6.1822316.50046K562PABPC4
chr116706986567069917+3'-UTR5.301437.49354K562DDX6
chr116705681167056879+5'-UTR3.494565.70356HepG2XPO5
chr116705782267057887+5'-UTR,CDS3.791043.56019HepG2GRWD1
chr116705762267057677+5'-UTR,CDS3.730903.34184HepG2GRWD1
chr116705755367057613+5'-UTR,CDS4.054938.98325HepG2PPIG
chr116705755767057641+5'-UTR,CDS4.279914.40149HepG2SRSF1
chr116705762367057682+5'-UTR,CDS3.881207.26626HepG2PPIG
chr116706918367069269+CDS,intron-Distal,intron-Proximal3.752849.52799HepG2BUD13
chr116706693067067007+CDS,intron-Proximal5.252926.38747HepG2AQR
chr116706730267067320+CDS,intron-Distal4.258644.16554HepG2PPIG
chr116706699067067008+CDS,intron-Proximal4.104394.84268K562SF3B4
chr116705963567059696+CDS,intron-Proximal3.9029622.98657HepG2PRPF8
chr116706759167067651+CDS,intron-Distal,intron-Proximal3.396568.51251HepG2PRPF8
chr116705915867059218+CDS,intron-Proximal3.632804.74268K562UCHL5
chr116706880167068864+CDS,intron-Distal3.311746.27819HepG2PPIG
chr116705907267059153+CDS,intron-Proximal4.7072316.57879HepG2PPIG
chr116706750867067603+CDS,intron-Distal,intron-Proximal3.363074.45064HepG2GRWD1
chr116705920167059218+CDS,intron-Proximal4.738328.98365HepG2PPIG
chr116706759367067674+CDS,intron-Distal,intron-Proximal4.6996313.38267K562AQR
chr116706976367069796+CDS4.217414.16554HepG2PPIG
chr116705946067059491+CDS,intron-Proximal5.1696414.72440HepG2PPIG
chr116705791567057931+CDS,intron-Proximal4.017355.90868HepG2PRPF8
chr116705964767059714+CDS,intron-Proximal3.372203.75245K562BUD13
chr116706912067069168+CDS,intron-Distal,intron-Proximal3.432395.43815HepG2PRPF8
chr116706697667067010+CDS,intron-Proximal3.443546.59423HepG2SF3B4
chr116705949167059567+CDS4.1366815.69231HepG2PPIG
chr116706753967067615+CDS,intron-Distal,intron-Proximal3.834235.07449K562DDX24
chr116706753567067587+CDS,intron-Distal3.478373.07653K562ZNF622
chr116705910167059146+CDS3.825643.18234K562BUD13
chr116706694167067006+CDS,intron-Proximal4.549858.69247K562AQR
chr116705945867059552+CDS,intron-Proximal3.179354.00731K562UCHL5
chr116706732067067360+CDS,intron-Distal,intron-Proximal3.636236.41974HepG2PPIG
chr116705791567057963+CDS,intron-Proximal4.721835.17615K562AQR
chr116705946167059498+CDS,intron-Proximal5.239254.17466K562DDX24
chr116706751767067595+CDS,intron-Distal,intron-Proximal3.882609.30518HepG2PPIG
chr116705886667058975+CDS,intron-Proximal3.881015.93727K562SF3B4
chr116706708167067130+CDS,intron-Proximal4.8152210.42975HepG2PRPF8
chr116705899367059095+CDS,intron-Proximal4.483345.89229K562EFTUD2
chr116706897067069031+CDS,intron-Distal4.458373.99014HepG2PABPN1
chr116705895267058993+CDS,intron-Proximal4.075729.56105HepG2PPIG
chr116706697167067008+CDS,intron-Proximal4.223463.85435K562PRPF8
chr116706588067066024+intron-Distal4.3625613.67834K562EXOSC5
chr116706365167063726+intron-Distal3.722394.57394K562HNRNPM
chr116706452067064641+intron-Distal3.991386.25656HepG2PTBP1
chr116706588067065948+intron-Distal3.745628.16945K562TARDBP
chr116705819767058296+intron-Distal3.723015.35682HepG2GRWD1
chr116706452267064624+intron-Distal4.478053.91475K562PTBP1
chr116706589467066026+intron-Distal3.015134.67779HepG2SUGP2
chr116706584967066046+intron-Distal4.9865714.03469HepG2HNRNPM
chr116706378067063897+intron-Distal3.712133.90822HepG2HNRNPM
chr116705712067057210+intron-Distal,intron-Proximal5.343748.04569HepG2RBFOX2
chr116706358767063709+intron-Distal6.2342517.37596HepG2HNRNPM
chr116706661467066663+intron-Proximal3.020925.41373HepG2PPIG
chr116706709067067133+intron-Proximal4.687127.50107K562AQR
chr116706660867066680+intron-Proximal4.365745.64870K562DDX24
chr116706648267066523+intron-Proximal4.911909.18646HepG2SF3A3
chr116705885067058898+intron-Proximal4.674116.66303HepG2SF3B4
chr116706693267066994+intron-Proximal5.6467321.11883HepG2SF3A3
chr116706659567066660+intron-Proximal3.992119.59600K562AQR
chr116706694567066979+intron-Proximal5.5080716.57518K562SF3B4
chr116706694167066952+intron-Proximal3.020597.78635HepG2SF3B4
chr116706661367066689+intron-Proximal3.339437.20533HepG2EFTUD2
chr116706697967066990+intron-Proximal6.4877517.18793K562SF3B4
chr116706695267066976+intron-Proximal3.6655211.59215HepG2SF3B4
chr116705793167057979+intron-Proximal4.400197.08947HepG2PRPF8
chr116705889867058945+intron-Proximal4.568775.31973HepG2SF3B4
chr116705903167059067+intron-Proximal5.030594.52669HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ANKRD13D is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ANKRD13D is not available on ENCORE database.

  • 81 RBPs can affect the levels of ANKRD13D.  








The Knockdown/knockout RNA-Seq assay for ANKRD13D is not available on ENCORE database.





81 RBPs can affect the gene expression of ANKRD13D :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ANKRD13DENSG00000172932.10562.35370434.338900.372603.059102.42420HepG2ACO1
ANKRD13DENSG00000172932.10493.62680292.880400.753003.339202.30990HepG2BCCIP
ANKRD13DENSG00000172932.10598.69560434.311400.463004.719003.89460HepG2CKAP4
ANKRD13DENSG00000172932.10604.48910318.879300.922606.003304.87400HepG2CNOT7
ANKRD13DENSG00000172932.10359.70520269.557100.416101.891101.31100HepG2CPSF6
ANKRD13DENSG00000172932.10516.40760343.711100.587205.328904.48940HepG2CELF1
ANKRD13DENSG00000172932.10564.57680369.617300.611006.871805.78130HepG2DAZAP1
ANKRD13DENSG00000172932.10601.36890356.145400.755705.994505.10700HepG2DDX3X
ANKRD13DENSG00000172932.10471.14190306.003600.622503.666202.96330HepG2DDX6
ANKRD13DENSG00000172932.10325.00460205.868200.658605.551404.67370HepG2DNAJC2
ANKRD13DENSG00000172932.10407.36890294.101800.469902.268101.72680HepG2EIF2S1
ANKRD13DENSG00000172932.10552.85160316.480000.804705.041604.13200HepG2EIF4B
ANKRD13DENSG00000172932.10825.70990581.327900.506203.170802.53450HepG2ETF1
ANKRD13DENSG00000172932.10521.89860327.993900.670004.720103.83280HepG2FXR1
ANKRD13DENSG00000172932.10523.35010304.210900.782605.992005.02970HepG2G3BP1
ANKRD13DENSG00000172932.10416.62590269.988600.625803.283901.79210HepG2HNRNPA0
ANKRD13DENSG00000172932.10444.14500354.066500.326902.014401.39550HepG2HNRNPF
ANKRD13DENSG00000172932.10625.99330308.161301.0224011.022409.71030HepG2HNRNPK
ANKRD13DENSG00000172932.10356.57250231.673700.622005.017604.22190HepG2HNRNPU
ANKRD13DENSG00000172932.10428.73510309.205400.471402.418701.78240HepG2IGF2BP2
ANKRD13DENSG00000172932.10445.41280304.192800.550102.796401.59870HepG2KHDRBS1
ANKRD13DENSG00000172932.10446.10260328.108800.443102.203601.61550HepG2MAGOH
ANKRD13DENSG00000172932.10454.85770329.929300.463202.193101.62830HepG2MATR3
ANKRD13DENSG00000172932.10622.31640337.688000.881907.806406.76800HepG2NCBP2
ANKRD13DENSG00000172932.10473.92570366.509400.370702.187301.50790HepG2NOL12
ANKRD13DENSG00000172932.10566.76200291.564000.958805.196803.95040HepG2PABPC1
ANKRD13DENSG00000172932.10473.56610300.673800.655304.366603.47330HepG2PABPC4
ANKRD13DENSG00000172932.10480.32410312.040000.622205.829005.00010HepG2PCBP1
ANKRD13DENSG00000172932.10393.11250239.781200.713103.831402.61560HepG2PCBP2
ANKRD13DENSG00000172932.10475.47070349.853300.442502.567901.99140HepG2PUF60
ANKRD13DENSG00000172932.10506.64610371.370500.448003.769403.10010HepG2PUM1
ANKRD13DENSG00000172932.10513.98850371.108100.469803.180302.46080HepG2PUM2
ANKRD13DENSG00000172932.10273.99470442.41210-0.691207.173806.26060HepG2PUS1
ANKRD13DENSG00000172932.10577.58790343.886100.748007.601906.64430HepG2QKI
ANKRD13DENSG00000172932.10653.00040485.864500.426402.452401.95680HepG2RBM22
ANKRD13DENSG00000172932.10465.61250312.089200.577104.101803.29420HepG2RBM25
ANKRD13DENSG00000172932.10492.70730353.357400.479503.460302.86990HepG2NELFE
ANKRD13DENSG00000172932.10376.07810247.555900.603203.085202.23870HepG2RPS2
ANKRD13DENSG00000172932.10275.45120206.308900.416902.181601.59770HepG2SAFB2
ANKRD13DENSG00000172932.101111.12080598.295700.893008.263607.04880HepG2SF3A3
ANKRD13DENSG00000172932.10429.36690288.600800.573003.602402.80620HepG2SF3B1
ANKRD13DENSG00000172932.10697.51390330.580201.0771017.9722016.66830HepG2SF3B4
ANKRD13DENSG00000172932.10421.81000335.425700.330501.952801.34460HepG2SLBP
ANKRD13DENSG00000172932.10358.34620240.579500.574704.527303.73960HepG2SMN1
ANKRD13DENSG00000172932.10705.44900548.734100.362301.830701.39770HepG2SRFBP1
ANKRD13DENSG00000172932.10221.56280345.04550-0.639104.404203.84140HepG2SRSF1
ANKRD13DENSG00000172932.10542.44210345.412200.651106.055305.18100HepG2SRSF5
ANKRD13DENSG00000172932.10450.41120347.858300.372602.552201.88150HepG2SRSF7
ANKRD13DENSG00000172932.10365.29610280.705500.379902.275701.76510HepG2SRSF9
ANKRD13DENSG00000172932.10533.20130278.944000.934607.749305.82920HepG2STIP1
ANKRD13DENSG00000172932.10564.50410392.843300.522904.894604.10840HepG2SUCLG1
ANKRD13DENSG00000172932.10410.44180284.263900.529802.993502.24290HepG2TARDBP
ANKRD13DENSG00000172932.10380.30600225.071000.756706.244905.54820HepG2TIAL1
ANKRD13DENSG00000172932.10381.46470227.129400.747907.210306.37430HepG2TRIM56
ANKRD13DENSG00000172932.10541.88630341.768700.664902.836201.95270HepG2TUFM
ANKRD13DENSG00000172932.10679.83570440.288300.626605.305404.45120HepG2U2AF1
ANKRD13DENSG00000172932.10585.27770323.804300.853902.206601.33700HepG2U2AF2
ANKRD13DENSG00000172932.10336.18920169.316800.989404.782603.77920HepG2UCHL5
ANKRD13DENSG00000172932.10725.43580530.597300.451105.006704.10960HepG2UPF1
ANKRD13DENSG00000172932.10550.61580287.122600.939307.338705.56120HepG2XPO5
ANKRD13DENSG00000172932.10739.24730583.554800.341103.418202.82840HepG2ZNF622
ANKRD13DENSG00000172932.10912.93430657.687400.473005.873205.09490K562AGGF1
ANKRD13DENSG00000172932.10983.88470684.362800.523605.198804.29100K562AKAP8L
ANKRD13DENSG00000172932.10402.48660282.929600.508403.120702.28650K562CPSF6
ANKRD13DENSG00000172932.10720.64460981.63400-0.445904.669403.39080K562CELF1
ANKRD13DENSG00000172932.10675.80320355.632200.9261012.325809.95390K562DDX3X
ANKRD13DENSG00000172932.10474.74770360.569100.396802.780301.46930K562DDX6
ANKRD13DENSG00000172932.10603.56670277.507901.1209012.4742010.36950K562EFTUD2
ANKRD13DENSG00000172932.10869.02400409.954201.0838016.9684015.40920K562EIF2S2
ANKRD13DENSG00000172932.10483.21170334.614300.530104.624403.06350K562EIF4B
ANKRD13DENSG00000172932.10442.69860324.335800.448702.801001.50110K562EWSR1
ANKRD13DENSG00000172932.1049.79120140.43000-1.495907.103205.85660K562G3BP2
ANKRD13DENSG00000172932.10451.20240270.111600.740105.831504.68280K562GPKOW
ANKRD13DENSG00000172932.10655.00390477.947100.454603.017302.18810K562HSPD1
ANKRD13DENSG00000172932.10433.04210267.270200.696102.718301.70320K562IGF2BP2
ANKRD13DENSG00000172932.10462.40580327.486000.497602.998901.39300K562LSM11
ANKRD13DENSG00000172932.10466.74920603.61320-0.371002.985602.14690K562MTPAP
ANKRD13DENSG00000172932.10714.46500450.023400.666802.566301.62220K562PABPN1
ANKRD13DENSG00000172932.10542.94140249.810701.119908.701106.93290K562PCBP2
ANKRD13DENSG00000172932.10360.72780552.60960-0.615404.114403.09900K562PCBP3
ANKRD13DENSG00000172932.10249.33200423.85550-0.765506.733805.49500K562POLR2G
ANKRD13DENSG00000172932.10376.52750270.050300.479402.116301.45650K562PRPF8
ANKRD13DENSG00000172932.10473.22720329.121400.523803.377302.36390K562PSIP1
ANKRD13DENSG00000172932.10682.34650870.87560-0.352002.207801.48000K562PUF60
ANKRD13DENSG00000172932.10969.19670678.634000.514104.580903.90520K562PUS1
ANKRD13DENSG00000172932.10993.09170661.281400.586607.821406.85530K562RBM15
ANKRD13DENSG00000172932.10439.85580261.533900.749906.281304.94560K562RBM22
ANKRD13DENSG00000172932.10755.06860411.516200.875603.467902.08180K562SF1
ANKRD13DENSG00000172932.10312.11880145.944001.0966010.415608.70550K562SF3B4
ANKRD13DENSG00000172932.10274.25680425.15870-0.632504.967703.86000K562SYNCRIP
ANKRD13DENSG00000172932.10480.12060270.656900.826807.243006.03870K562TARDBP
ANKRD13DENSG00000172932.10388.00200261.085800.571403.831502.84560K562TIA1
ANKRD13DENSG00000172932.10449.78660336.415400.418902.331801.47470K562TRIM56
ANKRD13DENSG00000172932.10465.48870632.74990-0.442904.372803.32710K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ANKRD13D is not available on ENCORE database.





18 RBPs can affect the splicing of ANKRD13D :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEANKRD13DENSG00000172932.10chr11+670665286706659567059461670596516706700067067082-0.117000.006910.06844excludedHepG2U2AF2
A3SSANKRD13DENSG00000172932.10chr11+670687526706886967068795670688696706846067068618-0.262000.000120.00646shorterHepG2U2AF1
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.161000.000410.00332includedK562PUS1
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.244000.000000.00112includedK562HNRNPU
RIANKRD13DENSG00000172932.10chr11+670665286706708267066528670665956706700067067082-0.074000.001580.04954excludedK562SF3B1
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.193000.000000.00000includedHepG2U2AF2
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.100000.008730.08153includedK562AGGF1
RIANKRD13DENSG00000172932.10chr11+6705894667059217670589466705899267059073670592170.360000.000210.00345includedK562AGGF1
RIANKRD13DENSG00000172932.10chr11+6705754867057917670575486705768467057792670579170.301000.001010.01476includedK562PRPF8
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.318000.000570.01010includedHepG2PCBP1
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.195000.000030.00046includedK562AKAP8L
RIANKRD13DENSG00000172932.10chr11+6705754867057917670575486705768467057792670579170.100000.000360.00459includedK562AKAP8L
RIANKRD13DENSG00000172932.10chr11+6705754867057917670575486705768467057792670579170.100000.006220.05512includedHepG2U2AF1
RIANKRD13DENSG00000172932.10chr11+670665286706708267066528670665956706700067067082-0.296000.000890.05693excludedK562KHSRP
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.154000.000220.00354includedK562RBM15
RIANKRD13DENSG00000172932.10chr11+6705894667059217670589466705899267059073670592170.231000.001320.01624includedK562RBM15
RIANKRD13DENSG00000172932.10chr11+6705754867057917670575486705768467057792670579170.141000.000020.00039includedK562RBM15
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.470000.003830.04835includedK562U2AF2
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.366000.000120.00260includedHepG2NCBP2
RIANKRD13DENSG00000172932.10chr11+670589466705921767058946670589926705907367059217-0.158000.005810.05052excludedHepG2RBM22
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.342000.000170.00315includedHepG2HNRNPK
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.123000.003870.04233includedK562UTP18
RIANKRD13DENSG00000172932.10chr11+6706652867067082670665286706659567067000670670820.165000.002940.03003includedK562EFTUD2
RIANKRD13DENSG00000172932.10chr11+6705754867057917670575486705768467057792670579170.234000.007940.06746includedK562EFTUD2
RIANKRD13DENSG00000172932.10chr11+6705754867057917670575486705768467057792670579170.321000.000010.00011includedK562AQR
RIANKRD13DENSG00000172932.10chr11+6706727767067505670672776706735967067463670675050.082000.000080.00070includedK562AQR
MXEANKRD13DENSG00000172932.10chr11+67059461670596516706652867066595670590736705921767067000670670820.209000.002850.069211includedK562EFTUD2
MXEANKRD13DENSG00000172932.10chr11+67059461670596516706652867066595670590736705921767067000670670820.275000.000600.094811includedK562GEMIN5

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ANKRD13D is not avaliable on ENCORE database.