ALG9

General Information

Gene Name       : ALG9
Gene ID             : ENSG00000086848.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ALG9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ALG9ENSG00000086848.1425.4722.7124.09ENCSR000AEF
HepG2ALG9ENSG00000086848.1418.7126.4722.59ENCSR985KAT
K562ALG9ENSG00000086848.1421.0524.4722.76ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ALG9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ALG9 RNA is bound by 10 proteins.  







eCLIP assay for ALG9 is not avaliable on ENCORE database.





10 proteins are bound to ALG9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11111657104111657245-3'-UTR,CDS,intron-Distal,intron-Proximal3.102513.40321HepG2GRWD1
chr11111735903111735959-5'-UTR,intron-Distal,intron-Proximal3.267183.59112HepG2PPIG
chr11111728387111728480-5'-UTR,CDS,intron-Distal,intron-Proximal3.337868.39164K562U2AF2
chr11111724370111724409-5'-UTR,CDS,intron-Distal,intron-Proximal4.756604.34038HepG2BCLAF1
chr11111728416111728475-5'-UTR,CDS,intron-Distal,intron-Proximal3.516946.60594K562U2AF1
chr11111728323111728399-5'-UTR,CDS,intron-Distal,intron-Proximal3.997666.08299HepG2PPIG
chr11111706976111707019-5'-UTR,CDS,intron-Distal,intron-Proximal4.098873.77023K562ZNF622
chr11111728410111728483-5'-UTR,CDS,intron-Distal,intron-Proximal4.5403718.25526HepG2U2AF2
chr11111728324111728392-5'-UTR,CDS,intron-Distal,intron-Proximal3.139953.20659K562SND1
chr11111742175111742222-CDS,intron-Distal,intron-Proximal4.428267.51958HepG2DDX3X
chr11111731082111731265-intron-Distal,intron-Proximal5.1815914.97969K562AATF
chr11111711125111711254-intron-Distal4.165687.22994K562KHSRP
chr11111730777111730859-intron-Distal5.101558.49499K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ALG9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ALG9 is not available on ENCORE database.

  • 69 RBPs can affect the levels of ALG9.  








The Knockdown/knockout RNA-Seq assay for ALG9 is not available on ENCORE database.





69 RBPs can affect the gene expression of ALG9 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ALG9ENSG00000086848.10776.606401040.00370-0.421302.471101.96560HepG2AKAP1
ALG9ENSG00000086848.10585.74250860.52640-0.555004.302303.33180HepG2ASCC1
ALG9ENSG00000086848.101200.08530986.039500.283302.778802.09230HepG2AUH
ALG9ENSG00000086848.10979.17900660.210400.568505.527704.71680HepG2BOP1
ALG9ENSG00000086848.10865.07910606.112000.513104.142203.31660HepG2CPSF6
ALG9ENSG00000086848.10726.56510570.076500.349802.346001.51150HepG2DDX24
ALG9ENSG00000086848.10497.12380822.71710-0.726806.596905.70500HepG2EIF2S1
ALG9ENSG00000086848.10536.54150885.20870-0.722305.027404.11880HepG2EIF4B
ALG9ENSG00000086848.10766.19650543.445100.495504.153703.19860HepG2FUBP3
ALG9ENSG00000086848.10711.94140917.29150-0.365602.250901.62450HepG2FXR1
ALG9ENSG00000086848.10440.27830687.08330-0.642104.677303.85900HepG2GPKOW
ALG9ENSG00000086848.10821.19770655.695500.324601.851801.32640HepG2HNRNPLL
ALG9ENSG00000258529.10.000008.43460-99999.999992.517601.82620HepG2IGF2BP1
ALG9ENSG00000086848.10627.73810865.00060-0.462503.270402.54170HepG2IGF2BP2
ALG9ENSG00000086848.10687.30550933.63830-0.441902.560301.76260HepG2LARP4
ALG9ENSG00000086848.10656.59770917.61140-0.482903.450502.71730HepG2MAGOH
ALG9ENSG00000086848.10720.98630922.75990-0.356001.900301.37210HepG2MATR3
ALG9ENSG00000086848.10540.33780700.16370-0.373802.601801.81740HepG2MSI2
ALG9ENSG00000086848.10435.54340845.25850-0.9566018.6833017.33360HepG2PCBP1
ALG9ENSG00000086848.10992.95060675.250700.556207.640806.43360HepG2PRPF4
ALG9ENSG00000086848.10652.83140860.05330-0.397704.221003.57660HepG2PTBP1
ALG9ENSG00000086848.10525.58800802.78390-0.611106.316905.46510HepG2PUF60
ALG9ENSG00000086848.10614.59450852.15370-0.471506.780305.93680HepG2PUM1
ALG9ENSG00000086848.10629.98620851.55420-0.434804.124803.31340HepG2PUM2
ALG9ENSG00000086848.10810.91240674.220000.266202.251501.68280HepG2PUS1
ALG9ENSG00000086848.10433.34140690.05280-0.671203.222702.46510HepG2RAVER1
ALG9ENSG00000258529.110.477700.0000099999.999902.974102.08740HepG2RBM15
ALG9ENSG00000086848.101260.88680845.391400.576606.854405.83350HepG2RBM25
ALG9ENSG00000086848.10766.72330957.18070-0.320103.031202.46940HepG2NELFE
ALG9ENSG00000258529.10.000009.23460-99999.999992.733302.05300HepG2RPLP0
ALG9ENSG00000086848.10490.82290689.27620-0.489903.079802.23480HepG2RPS2
ALG9ENSG00000086848.10426.20690703.56040-0.723106.081604.48120HepG2RPS5
ALG9ENSG00000086848.10808.99130649.013700.317801.938801.34150HepG2SF3B1
ALG9ENSG00000086848.10443.17490627.46730-0.501705.597204.73390HepG2SMN1
ALG9ENSG00000258529.112.559400.0000099999.999902.698401.92680HepG2SNRNP70
ALG9ENSG00000086848.10802.665401068.73330-0.413005.266604.63620HepG2SRFBP1
ALG9ENSG00000258529.112.489800.0000099999.999904.089803.44350HepG2SRSF9
ALG9ENSG00000086848.10716.87350901.42870-0.330503.767303.06130HepG2SUCLG1
ALG9ENSG00000086848.10708.35380587.091800.270801.740901.32470HepG2TIAL1
ALG9ENSG00000086848.10435.25260592.32600-0.444504.062603.40590HepG2TRIM56
ALG9ENSG00000086848.10660.69260839.04750-0.344803.115302.01060HepG2UTP18
ALG9ENSG00000086848.101096.00830666.409300.7177014.7282013.37670HepG2ZC3H8
ALG9ENSG00000258529.10.0000019.46190-99999.999996.362804.52000K562ABCF1
ALG9ENSG00000086848.10809.93020532.874300.603905.075803.88120K562BOP1
ALG9ENSG00000258529.10.0000013.55320-99999.999993.674201.98540K562BUD13
ALG9ENSG00000086848.101086.77060714.614600.604702.437001.45090K562CNOT7
ALG9ENSG00000086848.10776.80730566.581900.455203.886502.95820K562CPSF6
ALG9ENSG00000086848.101585.766901182.907200.422704.441703.19940K562CELF1
ALG9ENSG00000258529.11.0763013.98560-3.699802.800701.94680K562FIP1L1
ALG9ENSG00000086848.10815.26100576.515400.499803.841002.82670K562FMR1
ALG9ENSG00000086848.10648.62620488.662600.408402.372701.53080K562FTO
ALG9ENSG00000086848.10541.12660404.424100.420003.187201.73760K562FUS
ALG9ENSG00000086848.10408.89830556.57610-0.444803.424102.76090K562FXR1
ALG9ENSG00000086848.10792.34550570.036400.475002.361301.71570K562G3BP2
ALG9ENSG00000086848.10555.45880759.73860-0.451803.519602.66990K562GRSF1
ALG9ENSG00000086848.10586.69700408.156800.523403.983503.28270K562HNRNPC
ALG9ENSG00000258529.10.0000011.50100-99999.999992.867501.91800K562HNRNPM
ALG9ENSG00000086848.10828.94760658.136300.332802.536501.67960K562HNRNPU
ALG9ENSG00000258529.10.0000018.96480-99999.999996.134104.96070K562HSPD1
ALG9ENSG00000086848.101345.378201083.531900.312202.407801.64640K562KIF1C
ALG9ENSG00000086848.10698.60690461.923900.596703.610302.52790K562KRR1
ALG9ENSG00000086848.10556.41260700.80130-0.332902.122501.38210K562MAGOH
ALG9ENSG00000086848.10538.57730699.39790-0.377002.828401.89530K562MATR3
ALG9ENSG00000086848.10708.77770583.170100.281302.200801.47590K562MTPAP
ALG9ENSG00000086848.10869.05300647.878300.423605.177704.20200K562NSUN2
ALG9ENSG00000086848.10971.23720515.704600.913203.063902.01110K562PABPN1
ALG9ENSG00000258529.10.0000015.87300-99999.999995.065303.89900K562PPIG
ALG9ENSG00000086848.10514.87590680.86340-0.403103.128402.42700K562PTBP1
ALG9ENSG00000086848.101577.516601012.590200.639507.087806.26440K562PUS1
ALG9ENSG00000086848.101279.24500986.551900.374703.880403.19490K562RBM15
ALG9ENSG00000086848.10422.79350687.09150-0.700506.597104.82890K562NELFE
ALG9ENSG00000086848.101015.38460541.698400.906403.124201.79030K562SNRNP200
ALG9ENSG00000258529.10.0000018.35350-99999.999995.766803.75900K562SSRP1
ALG9ENSG00000258529.10.0000016.78880-99999.999995.186103.39330K562STAU1
ALG9ENSG00000086848.101105.19050647.783100.770602.778101.34960K562SUPT6H
ALG9ENSG00000086848.10478.06700351.984400.441602.400801.53340K562TIAL1
ALG9ENSG00000086848.10500.75730373.889000.421402.476001.59010K562TRIM56
ALG9ENSG00000258529.10.0000016.37320-99999.999995.055503.04890K562TRIP6
ALG9ENSG00000086848.10764.96200587.804500.380002.960802.05670K562WDR3
ALG9ENSG00000086848.10834.88920611.316000.449604.604603.53300K562WDR43
ALG9ENSG00000086848.101190.26860909.627800.387803.320902.36460K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ALG9 is not available on ENCORE database.





11 RBPs can affect the splicing of ALG9 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEALG9ENSG00000086848.10chr11-111715323111715446111711377111711532111724102111724208-0.213000.001890.03474excludedHepG2U2AF1
SEALG9ENSG00000086848.10chr11-111715323111715446111711377111711532111724102111724208-0.252000.000030.00070excludedHepG2U2AF2
SEALG9ENSG00000086848.10chr11-1116758171116760391116570071116572441116803661116804330.117000.000000.00007includedK562GPKOW
SEALG9ENSG00000086848.10chr11-1116758171116760391116570071116572441116803661116804330.155000.000050.00367includedHepG2MATR3
SEALG9ENSG00000086848.10chr11-111715323111715446111711377111711532111724102111724208-0.127000.000960.09653excludedHepG2PCBP2
SEALG9ENSG00000086848.10chr11-1116758171116760391116570071116572441116803661116804330.096000.000080.00903includedK562HNRNPL
SEALG9ENSG00000086848.10chr11-1116591641116592931116571871116572441116803661116804970.115000.005490.07470includedK562HNRNPC
A3SSALG9ENSG00000086848.10chr11-1117089711117091221117089711117091011117113771117115320.175000.014270.07165longerK562AQR
MXEALG9ENSG00000258529.1chr11-111659164111659293111675817111676039111657009111657244111680366111680497-0.471000.007020.091532includedHepG2U2AF1
MXEALG9ENSG00000086848.10chr11-111711377111711532111715323111715446111708971111709101111724102111724208-0.224000.000100.003492includedHepG2FTO
MXEALG9ENSG00000086848.10chr11-111711377111711532111715323111715446111708971111709122111724102111724208-0.278000.006360.083762includedHepG2FTO
MXEALG9ENSG00000086848.10chr11-1116803661116804971117068871117070171116570071116572441117081901117083380.128000.001470.023671includedK562DROSHA
MXEALG9ENSG00000086848.10chr11-1116803661116805721117068871117070741116571251116572441117081901117083380.081000.017570.099191includedK562AQR
MXEALG9ENSG00000086848.10chr11-111711377111711532111715323111715446111708971111709101111724102111724208-0.182000.009000.049722includedHepG2U2AF2
MXEALG9ENSG00000086848.10chr11-111711377111711532111715323111715446111680366111680497111724102111724208-0.267000.002910.019692includedHepG2U2AF2
MXEALG9ENSG00000086848.10chr11-111711377111711532111715323111715446111708971111709122111724102111724208-0.431000.000130.001472includedHepG2U2AF2
MXEALG9ENSG00000086848.10chr11-111708190111708338111711377111711532111680366111680497111715323111715446-0.191000.000360.003382includedHepG2U2AF2
MXEALG9ENSG00000086848.10chr11-1117113771117115321117153231117154461117089711117091221117241021117242080.231000.002510.084321includedHepG2DROSHA
MXEALG9ENSG00000086848.10chr11-111711377111711532111715323111715446111708971111709101111724102111724208-0.226000.000950.037572includedK562TAF15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ALG9 is not avaliable on ENCORE database.