AC016683.6

General Information

Gene Name       : AC016683.6
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC016683.6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC016683.6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AC016683.6 RNA is bound by 9 proteins.  







eCLIP assay for AC016683.6 is not avaliable on ENCORE database.





9 proteins are bound to AC016683.6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2113993251113993354+intron-Distal,intron-Proximal3.582396.61592K562SLTM
chr2113994445113994543+intron-Distal3.510204.71513K562NONO
chr2113999876113999954+intron-Distal4.2131112.37417K562CSTF2T
chr2113993240113993349+intron-Distal,intron-Proximal3.912986.22373K562DROSHA
chr2113998407113998490+intron-Distal5.279389.97545K562CSTF2T
chr2114000185114000262+intron-Distal4.845207.75663K562CSTF2T
chr2113999352113999448+intron-Distal5.159799.97545K562CSTF2T
chr2114001565114001717+intron-Distal4.137213.08314K562TARDBP
chr2113993197113993346+intron-Distal,intron-Proximal3.520034.77759K562XRN2
chr2113999851113999953+intron-Distal3.991415.51270K562GTF2F1
chr2113993211113993369+intron-Distal,intron-Proximal4.2481412.03105K562GTF2F1
chr2113994220113994317+intron-Distal,intron-Proximal3.229723.36199K562EWSR1
chr2113993243113993349+intron-Distal,intron-Proximal4.293429.51280K562CSTF2T
chr2113998925113998971+intron-Distal5.087349.42220K562CSTF2T
chr2114012885114012960+intron-Distal,intron-Proximal4.778873.19125K562GTF2F1
chr2113993186113993357+intron-Distal,intron-Proximal3.928258.02891K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AC016683.6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC016683.6 is not available on ENCORE database.

  • 48 RBPs can affect the levels of AC016683.6.  








The Knockdown/knockout RNA-Seq assay for AC016683.6 is not available on ENCORE database.





48 RBPs can affect the gene expression of AC016683.6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AC016683.6ENSG00000189223.910.652000.625804.089201.906201.45490HepG2AKAP1
AC016683.6ENSG00000189223.915.408700.951404.017402.793801.68400HepG2CPSF7
AC016683.6ENSG00000189223.934.956100.513806.088108.768407.73290HepG2DDX6
AC016683.6ENSG00000189223.924.294703.766402.689302.876001.74200HepG2GRSF1
AC016683.6ENSG00000189223.911.392700.515704.465302.442401.78410HepG2HNRNPK
AC016683.6ENSG00000189223.916.974704.719101.846701.940301.42510HepG2PUM1
AC016683.6ENSG00000189223.9256.039903.261606.2945024.9535023.04390HepG2RAVER1
AC016683.6ENSG00000189223.917.480403.306802.402102.555601.63670HepG2SMNDC1
AC016683.6ENSG00000189223.944.122707.445802.566905.434204.79660HepG2SRFBP1
AC016683.6ENSG00000189223.987.941901.666605.7215025.8655024.49880HepG2SRSF9
AC016683.6ENSG00000189223.914.259001.527303.222802.778102.21330HepG2TRIM56
AC016683.6ENSG00000189223.9719.386701062.84740-0.563108.361807.44810K562AGGF1
AC016683.6ENSG00000189223.9601.336701105.92280-0.8790012.8875011.33080K562AKAP8L
AC016683.6ENSG00000189223.91639.714701290.325000.345602.366401.81720K562AQR
AC016683.6ENSG00000189223.9856.797301160.34500-0.437505.292603.98350K562ATP5C1
AC016683.6ENSG00000189223.9784.51400555.176500.498804.424903.43430K562CPSF6
AC016683.6ENSG00000189223.91989.130501667.703500.254202.359301.46050K562CELF1
AC016683.6ENSG00000189223.91325.27870972.493200.446406.506005.56590K562DDX47
AC016683.6ENSG00000189223.9995.14990524.645800.9235013.3020011.44450K562EIF4A3
AC016683.6ENSG00000189223.91024.91190564.915500.8593010.744609.00380K562FMR1
AC016683.6ENSG00000189223.9768.70520478.832700.682806.115004.70060K562FTO
AC016683.6ENSG00000189223.9708.95670545.605900.377703.083402.44940K562FXR1
AC016683.6ENSG00000189223.9733.18130530.041800.468003.571602.67400K562GPKOW
AC016683.6ENSG00000189223.91672.992101248.884900.421704.265403.32990K562GRSF1
AC016683.6ENSG00000189223.91103.88790544.012901.0208017.0821015.67800K562HNRNPC
AC016683.6ENSG00000189223.91010.69300665.021100.603805.471003.67360K562HNRNPK
AC016683.6ENSG00000189223.91152.86070878.825900.391503.510102.30260K562HNRNPL
AC016683.6ENSG00000189223.9850.255201173.72400-0.465103.554302.60610K562KIF1C
AC016683.6ENSG00000189223.9775.95740452.629200.777505.938304.51040K562KRR1
AC016683.6ENSG00000189223.91060.39560699.864100.599407.053005.68640K562MAGOH
AC016683.6ENSG00000189223.9966.517301314.85850-0.444004.644403.40330K562MBNL1
AC016683.6ENSG00000189223.9731.50450517.386300.499504.007202.94020K562METAP2
AC016683.6ENSG00000189223.91010.80650718.956500.491406.758205.54340K562MTPAP
AC016683.6ENSG00000189223.9661.88290921.61500-0.477602.816101.92440K562NAA15
AC016683.6ENSG00000189223.91081.75150798.823600.437306.667305.57680K562NSUN2
AC016683.6ENSG00000189223.91818.952301479.972200.297402.595201.80550K562PUF60
AC016683.6ENSG00000189223.91969.405701574.074400.323203.560102.33990K562PUM1
AC016683.6ENSG00000189223.91840.784301542.391800.255102.736001.78190K562PUM2
AC016683.6ENSG00000189223.9562.944501096.90170-0.962409.023608.09200K562PUS1
AC016683.6ENSG00000189223.9622.159101068.65800-0.7804012.8367011.55850K562RBM15
AC016683.6ENSG00000189223.9866.13850651.865300.409903.137402.23660K562RBM22
AC016683.6ENSG00000189223.9949.84000686.020800.469303.688602.40670K562NELFE
AC016683.6ENSG00000189223.9880.48930594.482400.566604.388003.08930K562RPS3
AC016683.6ENSG00000189223.91166.10430788.237500.564908.460607.09460K562SF3A3
AC016683.6ENSG00000189223.9695.46790504.143600.464002.794001.81550K562SF3B1
AC016683.6ENSG00000189223.9411.53490541.02790-0.394702.768801.91360K562SF3B4
AC016683.6ENSG00000189223.91055.86880666.642700.663308.504307.26890K562SRSF1
AC016683.6ENSG00000189223.9894.26790674.616200.406502.915902.18990K562TARDBP
AC016683.6ENSG00000189223.9841.57660650.761800.370902.938402.09190K562TIA1
AC016683.6ENSG00000189223.91121.29350847.009800.404605.207604.25570K562UPF1
AC016683.6ENSG00000189223.91036.03840753.667000.459006.651305.39270K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AC016683.6 is not available on ENCORE database.





1 RBPs can affect the splicing of AC016683.6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEAC016683.6ENSG00000189223.9chr2+113995666113995789114012949114013126113993103113993147114016840114017161-0.266000.001190.010662includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AC016683.6 is not avaliable on ENCORE database.