ZNHIT6

General Information

Gene Name       : ZNHIT6
Gene ID             : ENSG00000117174.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ZNHIT6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNHIT6ENSG00000117174.1024.1221.8122.96ENCSR000AEF
HepG2ZNHIT6ENSG00000117174.109.7915.0512.42ENCSR985KAT
K562ZNHIT6ENSG00000117174.1023.1525.2624.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNHIT6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNHIT6 RNA is bound by 8 proteins.  







eCLIP assay for ZNHIT6 is not avaliable on ENCORE database.





8 proteins are bound to ZNHIT6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr18617397386174068-5'-UTR,intron-Distal3.8102210.24124K562DDX3X
chr18617330686173415-CDS,intron-Distal,intron-Proximal3.009893.66193HepG2PPIG
chr18617212486172186-CDS,intron-Distal,intron-Proximal3.909845.85226K562UCHL5
chr18617339986173537-CDS,intron-Distal4.3579211.63125K562UCHL5
chr18617200186172039-CDS,intron-Distal,intron-Proximal4.624075.03746HepG2BCLAF1
chr18617212486172172-CDS,intron-Distal,intron-Proximal3.607364.79276K562ZNF622
chr18617211786172192-CDS,intron-Distal,intron-Proximal5.531209.78571HepG2BCLAF1
chr18617211886172193-CDS,intron-Distal,intron-Proximal4.715894.97342HepG2PPIG
chr18617332286173419-CDS,intron-Distal4.969146.58593HepG2BCLAF1
chr18617327286173378-CDS,intron-Distal,intron-Proximal3.998736.79646HepG2PRPF8
chr18616784186167943-CDS,intron-Distal5.178077.95223HepG2BCLAF1
chr18617330786173399-CDS,intron-Distal,intron-Proximal3.774849.72069K562UCHL5
chr18617330686173419-CDS,intron-Distal,intron-Proximal4.308864.45558HepG2GRWD1
chr18617331386173454-CDS,intron-Distal3.185896.26128K562ZNF622
chr18617330686173419-CDS,intron-Distal,intron-Proximal4.016393.75533K562TRA2A
chr18617373886173818-CDS,intron-Distal3.602543.68471HepG2BCLAF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNHIT6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNHIT6 is not available on ENCORE database.

  • 74 RBPs can affect the levels of ZNHIT6.  








The Knockdown/knockout RNA-Seq assay for ZNHIT6 is not available on ENCORE database.





74 RBPs can affect the gene expression of ZNHIT6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNHIT6ENSG00000117174.6278.86530379.86900-0.445902.289101.38090HepG2ADAR
ZNHIT6ENSG00000117174.61549.58890652.129601.2486018.1603016.92440HepG2AKAP1
ZNHIT6ENSG00000117174.6988.82880514.986500.941105.178704.16410HepG2CALR
ZNHIT6ENSG00000117174.6468.03300712.46170-0.606202.703702.02330HepG2CPSF6
ZNHIT6ENSG00000117174.6716.23330585.012200.291902.091501.51960HepG2CELF1
ZNHIT6ENSG00000117174.6455.00630629.08290-0.467405.176904.20960HepG2DAZAP1
ZNHIT6ENSG00000117174.6585.53250403.345200.537604.206203.06940HepG2DDX24
ZNHIT6ENSG00000117174.61095.86150624.729800.810708.768007.70790HepG2DDX3X
ZNHIT6ENSG00000117174.6645.27450441.505200.547403.418002.56910HepG2DDX55
ZNHIT6ENSG00000117174.6268.76960536.56410-0.997408.448907.42470HepG2DDX6
ZNHIT6ENSG00000117174.6457.89480327.760700.482302.828101.70850HepG2EFTUD2
ZNHIT6ENSG00000117174.6351.48700515.90310-0.553603.400002.74700HepG2EIF2S1
ZNHIT6ENSG00000117174.6504.83590319.143100.661504.853303.68130HepG2EIF3D
ZNHIT6ENSG00000117174.6805.24900572.618600.491803.185802.36640HepG2FIP1L1
ZNHIT6ENSG00000117174.6374.06060270.771500.466102.428901.69140HepG2FUBP3
ZNHIT6ENSG00000117174.6425.27950575.15210-0.435502.464801.81070HepG2FXR1
ZNHIT6ENSG00000117174.6431.53580566.40170-0.392302.082201.31740HepG2G3BP2
ZNHIT6ENSG00000117174.6532.02910807.71900-0.602302.727402.09040HepG2GPKOW
ZNHIT6ENSG00000117174.6393.55840672.99160-0.7740010.316209.04530HepG2HNRNPF
ZNHIT6ENSG00000117174.6540.05410770.81310-0.513302.160801.59800HepG2HNRNPLL
ZNHIT6ENSG00000117174.6580.66790395.217000.555004.904503.68120HepG2HNRNPM
ZNHIT6ENSG00000117174.6353.07720662.71320-0.9084011.301609.93420HepG2IGF2BP1
ZNHIT6ENSG00000117174.6975.32130578.594100.753206.782405.82860HepG2MATR3
ZNHIT6ENSG00000117174.6535.72310785.93650-0.552902.443501.53760HepG2MTPAP
ZNHIT6ENSG00000117174.6457.88290683.40930-0.577802.086201.43230HepG2NSUN2
ZNHIT6ENSG00000117174.6581.17190454.692600.354002.657401.89780HepG2PRPF4
ZNHIT6ENSG00000117174.6794.82070632.082300.330403.297202.66150HepG2PUM1
ZNHIT6ENSG00000117174.6320.76490450.73530-0.490804.097403.37410HepG2PUS1
ZNHIT6ENSG00000117174.61054.46570674.660000.644209.467408.63820HepG2RBM22
ZNHIT6ENSG00000117174.6751.83140495.557400.601305.467104.54830HepG2RBM25
ZNHIT6ENSG00000117174.6488.15660724.84780-0.570304.582803.73390HepG2RPLP0
ZNHIT6ENSG00000117174.6606.27550336.967000.847306.936605.75510HepG2RRP9
ZNHIT6ENSG00000117174.6285.52400380.00180-0.412402.691402.05350HepG2SAFB2
ZNHIT6ENSG00000117174.61006.24500762.023900.401005.069404.44900HepG2SRFBP1
ZNHIT6ENSG00000117174.6958.50130547.893700.8068014.5682013.66470HepG2SRSF1
ZNHIT6ENSG00000117174.6422.02670661.16220-0.647707.436506.38410HepG2SRSF7
ZNHIT6ENSG00000117174.6507.47800661.65250-0.382702.564402.06540HepG2SSB
ZNHIT6ENSG00000117174.6532.47960751.07040-0.496202.014201.38430HepG2TARDBP
ZNHIT6ENSG00000117174.6237.79250414.62530-0.802107.281206.54030HepG2TIAL1
ZNHIT6ENSG00000117174.6941.47650489.959900.9422012.0924010.75000HepG2U2AF1
ZNHIT6ENSG00000117174.6262.10860402.51230-0.618902.419301.48610HepG2UPF2
ZNHIT6ENSG00000117174.6755.59410455.361200.7305010.579909.53000HepG2UTP3
ZNHIT6ENSG00000117174.61144.93460819.434500.482503.705602.32050K562AARS
ZNHIT6ENSG00000117174.61349.069601816.92530-0.429503.995903.31580K562AQR
ZNHIT6ENSG00000117174.6875.779301090.25310-0.316003.267102.22100K562BCLAF1
ZNHIT6ENSG00000117174.61500.997002214.26250-0.560902.841901.76170K562CNOT7
ZNHIT6ENSG00000117174.6854.776301337.19310-0.645608.930307.50420K562CPSF6
ZNHIT6ENSG00000117174.6756.03310955.96390-0.338503.432101.94340K562DDX27
ZNHIT6ENSG00000117174.63730.524401863.186001.0015043.5389041.25350K562DDX47
ZNHIT6ENSG00000117174.61880.389901514.693000.311903.643502.61940K562DKC1
ZNHIT6ENSG00000117174.6666.84940970.41470-0.541206.770104.84620K562EIF2S1
ZNHIT6ENSG00000117174.61104.713001501.41320-0.442603.801902.98090K562EIF2S2
ZNHIT6ENSG00000117174.6859.62170560.120300.617902.320001.40700K562EIF3A
ZNHIT6ENSG00000117174.61363.87340976.159900.482406.475105.27270K562EIF3G
ZNHIT6ENSG00000117174.61073.666101556.19050-0.535505.882704.61290K562FIP1L1
ZNHIT6ENSG00000117174.61021.699201276.68850-0.321402.436201.68930K562GPKOW
ZNHIT6ENSG00000117174.6575.06460896.80970-0.641106.873505.97260K562HNRNPC
ZNHIT6ENSG00000117174.61700.822401170.332700.539204.996003.28280K562HNRNPK
ZNHIT6ENSG00000117174.61626.053302109.92990-0.375803.390302.51050K562HSPD1
ZNHIT6ENSG00000117174.6898.266201172.14660-0.383902.247001.35090K562IGF2BP2
ZNHIT6ENSG00000117174.6923.705601192.11390-0.368003.025401.76410K562IGF2BP3
ZNHIT6ENSG00000117174.61584.186401172.961000.433502.699101.82900K562NAA15
ZNHIT6ENSG00000117174.61161.581801366.03890-0.233902.782102.03390K562NSUN2
ZNHIT6ENSG00000117174.61407.098402127.24960-0.596303.082101.77150K562PABPC1
ZNHIT6ENSG00000117174.61471.314901095.755300.425103.963202.78570K562PCBP2
ZNHIT6ENSG00000117174.61277.190201766.51630-0.467904.661703.55750K562PPIG
ZNHIT6ENSG00000117174.61315.80020902.951600.543105.400204.34770K562PRPF8
ZNHIT6ENSG00000117174.63066.689402519.735600.283303.274702.10970K562PUM1
ZNHIT6ENSG00000117174.61608.71690919.871200.806309.557408.02660K562RPS19
ZNHIT6ENSG00000117174.61204.160002016.75020-0.744004.524602.46950K562SBDS
ZNHIT6ENSG00000117174.61127.001201347.94830-0.258302.397101.63350K562SF3A3
ZNHIT6ENSG00000117174.6959.016801567.93560-0.709202.964101.59410K562SFPQ
ZNHIT6ENSG00000117174.6531.60670695.34330-0.387402.467201.51130K562SRFBP1
ZNHIT6ENSG00000117174.6964.452001381.00360-0.517909.572907.94650K562SRPK2
ZNHIT6ENSG00000117174.61526.95900918.969100.732502.835702.00460K562SYNCRIP
ZNHIT6ENSG00000117174.6703.130501187.16980-0.755709.263307.86220K562TARDBP
ZNHIT6ENSG00000117174.6827.237701160.41490-0.488303.560101.74320K562TBRG4
ZNHIT6ENSG00000117174.6937.524601145.17790-0.288602.265901.53230K562TIA1
ZNHIT6ENSG00000117174.6485.51020773.38570-0.671705.660404.27640K562TIAL1
ZNHIT6ENSG00000117174.6678.41030925.40150-0.447903.104802.02150K562UCHL5
ZNHIT6ENSG00000117174.6972.069801448.44090-0.5754011.189009.86480K562UPF1
ZNHIT6ENSG00000117174.6952.925701239.38370-0.379203.464302.48790K562WDR3
ZNHIT6ENSG00000117174.61484.117102046.85440-0.463805.239203.98930K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNHIT6 is not available on ENCORE database.





2 RBPs can affect the splicing of ZNHIT6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNHIT6ENSG00000117174.6chr1-861235298612365486115105861197818614291886142996-0.118000.000010.00028excludedK562AQR
SEZNHIT6ENSG00000117174.6chr1-861235298612365486115105861197818614291886142996-0.148000.000510.02269excludedK562HNRNPU
A3SSZNHIT6ENSG00000117174.6chr1-8614291886143027861429188614299686144383861444640.057000.000220.00182longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNHIT6 is not avaliable on ENCORE database.