ZNF580

General Information

Gene Name       : ZNF580
Gene ID             : ENSG00000213015.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF580)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF580ENSG00000213015.83.375.054.21ENCSR000AEF
HepG2ZNF580ENSG00000213015.86.543.565.05ENCSR985KAT
K562ZNF580ENSG00000213015.811.238.539.88ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF580 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF580 RNA is bound by 29 proteins.  







eCLIP assay for ZNF580 is not avaliable on ENCORE database.





29 proteins are bound to ZNF580 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195615441856154541+3'-UTR,intron-Distal3.064444.38283HepG2LARP4
chr195615479256154810+3'-UTR,intron-Distal3.924095.86001HepG2CSTF2T
chr195615458856154639+3'-UTR,intron-Distal3.7147810.31453K562PABPC4
chr195615451956154555+3'-UTR,intron-Distal3.810873.06406HepG2IGF2BP1
chr195615438356154443+3'-UTR,CDS,intron-Distal3.227253.67697K562YBX3
chr195615451956154572+3'-UTR,intron-Distal3.882286.50713K562IGF2BP2
chr195615440056154480+3'-UTR,intron-Distal3.328029.91296HepG2CSTF2T
chr195615428156154396+3'-UTR,CDS,intron-Distal4.2942116.93479HepG2CSTF2T
chr195615459456154638+3'-UTR,intron-Distal5.3243910.48231HepG2CSTF2T
chr195615449756154519+3'-UTR,intron-Distal4.517035.30214K562IGF2BP2
chr195615467856154744+3'-UTR,intron-Distal6.8222717.95058HepG2XPO5
chr195615456856154686+3'-UTR,intron-Distal3.287133.87422HepG2CSTF2
chr195615364856153684+5'-UTR,intron-Distal3.940483.63122HepG2PRPF4
chr195615339556153454+5'-UTR,intron-Distal4.665256.76416K562CSTF2T
chr195615219656152275+5'-UTR,intron-Distal4.9266427.30895HepG2CSTF2T
chr195614640256146528+5'-UTR3.146816.97307HepG2NCBP2
chr195615228556152331+5'-UTR,intron-Distal4.039258.79576HepG2FAM120A
chr195615254056152600+5'-UTR,intron-Distal,intron-Proximal3.9089312.32657HepG2CSTF2T
chr195615220756152265+5'-UTR,intron-Distal3.181177.45053HepG2FAM120A
chr195615254556152605+5'-UTR,intron-Distal,intron-Proximal4.9749710.29014HepG2FAM120A
chr195615238656152456+5'-UTR,intron-Distal4.0717315.24811HepG2CSTF2T
chr195615354656153584+5'-UTR,intron-Distal,intron-Proximal3.223827.46255HepG2CSTF2T
chr195614681056146864+5'-UTR3.835776.00014K562CSTF2T
chr195615252856152587+5'-UTR,intron-Distal,intron-Proximal3.941753.82910K562NONO
chr195615374156153783+5'-UTR,intron-Distal,intron-Proximal3.409449.07843HepG2CSTF2T
chr195614680956146875+5'-UTR4.253914.58930HepG2TAF15
chr195615341056153467+5'-UTR,intron-Distal3.170443.14777HepG2GTF2F1
chr195615239456152449+5'-UTR,intron-Distal3.464775.38180HepG2FAM120A
chr195614650356146549+5'-UTR3.421644.59965HepG2PRPF4
chr195614673656146869+5'-UTR3.216513.74203K562FUS
chr195614659456146643+5'-UTR3.367875.29595K562GTF2F1
chr195614680756146880+5'-UTR3.156034.78582HepG2HNRNPU
chr195615246456152518+5'-UTR,intron-Distal3.293138.77966HepG2CSTF2T
chr195615373256153790+5'-UTR,intron-Distal,intron-Proximal4.769545.80843K562CSTF2T
chr195614682656146871+5'-UTR4.458569.17322HepG2CSTF2T
chr195614654956146665+5'-UTR3.224658.80883HepG2PRPF4
chr195615228856152333+5'-UTR,intron-Distal4.953216.87697K562NONO
chr195615227556152340+5'-UTR,intron-Distal5.4281724.36373HepG2CSTF2T
chr195615340056153443+5'-UTR,intron-Distal4.051295.44474HepG2FAM120A
chr195615240956152429+5'-UTR,intron-Distal3.797603.25631HepG2PRPF4
chr195614680156146864+5'-UTR3.396375.12615HepG2FAM120A
chr195615243056152508+5'-UTR,intron-Distal3.494075.08370HepG2DDX3X
chr195615246256152528+5'-UTR,intron-Distal3.633414.48585K562NONO
chr195615254656152593+5'-UTR,intron-Distal,intron-Proximal4.552874.66211HepG2XRN2
chr195615353856153587+5'-UTR,intron-Distal,intron-Proximal3.295673.47229K562GTF2F1
chr195614672656146873+5'-UTR4.3246618.61864HepG2PRPF4
chr195614683056146891+5'-UTR4.097225.23323K562GTF2F1
chr195615397756154046+CDS,intron-Distal3.416094.78882K562IGF2BP2
chr195615395556154033+CDS,intron-Distal4.5375911.72839K562PCBP1
chr195614806856148122+intron-Distal3.9513112.14979HepG2CSTF2T
chr195615221256152259+intron-Distal3.894768.59527K562NONO
chr195614909256149136+intron-Distal4.442574.23759K562NONO
chr195615056356150606+intron-Distal3.108214.97257HepG2XRN2
chr195614797356148036+intron-Distal3.355393.74491K562CSTF2T
chr195614769956147747+intron-Distal4.095925.72412HepG2FAM120A
chr195615272856152809+intron-Distal5.2358523.29254HepG2FAM120A
chr195615279556152994+intron-Distal3.065985.50689HepG2FKBP4
chr195614893656148973+intron-Distal4.059388.28918HepG2CSTF2T
chr195615294756152992+intron-Distal4.119069.35150HepG2FAM120A
chr195615294256152996+intron-Distal3.867409.48840K562CSTF2T
chr195614767456147753+intron-Distal4.414875.52176HepG2TAF15
chr195614899456149061+intron-Distal3.986743.43967HepG2TAF15
chr195614928256149376+intron-Distal5.7400936.82421HepG2CSTF2
chr195614899856149072+intron-Distal3.427116.99195K562NONO
chr195614773056147889+intron-Distal5.287259.28688HepG2GTF2F1
chr195614900356149071+intron-Distal3.482927.20632HepG2FAM120A
chr195615254956152595+intron-Distal,intron-Proximal4.152183.01994HepG2GTF2F1
chr195615268256152793+intron-Distal3.222353.52283HepG2SAFB
chr195615205856152116+intron-Distal4.2155617.19838HepG2CSTF2T
chr195615293856153010+intron-Distal5.646349.43216K562GTF2F1
chr195615294356152992+intron-Distal3.880095.73324K562FAM120A
chr195615272856152755+intron-Distal4.163613.11728K562FAM120A
chr195615206256152114+intron-Distal4.319314.48935K562CSTF2T
chr195615326156153325+intron-Distal3.805806.24931HepG2PRPF4
chr195615305256153097+intron-Distal3.918743.05512HepG2PRPF4
chr195615299256153021+intron-Distal3.270653.68667HepG2FAM120A
chr195615267556152753+intron-Distal4.640976.64417K562NONO
chr195615055656150624+intron-Distal3.785188.79576HepG2FAM120A
chr195615055756150617+intron-Distal3.415746.37265K562CSTF2T
chr195615326856153314+intron-Distal4.599355.81141K562CSTF2T
chr195615299956153025+intron-Distal3.825903.48722HepG2PRPF4
chr195615057056150635+intron-Distal3.554293.80864K562FAM120A
chr195615266756152748+intron-Distal5.003117.57617HepG2GTF2F1
chr195615055256150623+intron-Distal4.167256.74265K562GTF2F1
chr195615266756152728+intron-Distal4.6957822.11888HepG2FAM120A
chr195615172056151767+intron-Distal3.5287710.02648HepG2CSTF2T
chr195614818356148223+intron-Distal3.122803.17504K562CSTF2T
chr195614758356147680+intron-Distal3.571303.23171K562FUS
chr195615055756150621+intron-Distal4.083513.85101K562TAF15
chr195615192256151952+intron-Distal3.086736.44311HepG2CSTF2T
chr195614899756149062+intron-Distal5.4167522.09151HepG2CSTF2T
chr195614711656147233+intron-Distal,intron-Proximal4.049354.70114K562FUS
chr195614832756148415+intron-Distal4.193955.39633HepG2CSTF2
chr195614827956148357+intron-Distal3.9770614.53782HepG2CSTF2T
chr195615270456152793+intron-Distal3.830323.05863HepG2CSTF2
chr195615273756152801+intron-Distal3.8475210.19162K562CSTF2T
chr195614782356147879+intron-Distal3.456204.25110K562CSTF2T
chr195614728956147429+intron-Distal4.005003.15856K562FUS
chr195614928956149354+intron-Distal8.3914448.48196K562FMR1
chr195615265256152821+intron-Distal4.378315.92430K562AKAP8L
chr195614770056147797+intron-Distal4.365214.96279K562HNRNPU
chr195614765556147767+intron-Distal3.276696.98206HepG2PRPF4
chr195615293756152999+intron-Distal4.957747.58609HepG2PRPF4
chr195615285056152896+intron-Distal3.411443.72797K562GTF2F1
chr195615185956151903+intron-Distal4.965298.09947K562NONO
chr195615056456150636+intron-Distal4.369213.28464K562EWSR1
chr195614806456148118+intron-Distal3.721935.81451K562CSTF2T
chr195615261656152667+intron-Distal,intron-Proximal4.092177.41671HepG2FAM120A
chr195614899556149085+intron-Distal3.629675.18472HepG2CSTF2
chr195615267856152737+intron-Distal4.5130012.16230K562CSTF2T
chr195614928656149365+intron-Distal3.7250013.32922K562CSTF2T
chr195614767656147766+intron-Distal4.424545.79294K562GTF2F1
chr195615267056152801+intron-Distal5.6667614.02567K562GTF2F1
chr195615299256153029+intron-Distal4.456094.64560K562FAM120A
chr195614735856147396+intron-Distal3.716575.56645HepG2CSTF2T
chr195614771756147740+intron-Distal3.752645.56645HepG2CSTF2T
chr195614798056148034+intron-Distal3.239887.61507HepG2CSTF2T
chr195614922656149377+intron-Distal3.153873.73766HepG2SFPQ
chr195615206256152114+intron-Distal4.337359.62860HepG2FAM120A
chr195615273256152781+intron-Distal4.252894.07810K562UPF1
chr195615273056152801+intron-Distal4.8124720.31027HepG2CSTF2T
chr195614929056149352+intron-Distal5.6254032.65779HepG2CSTF2T
chr195615256056152576+intron-Distal,intron-Proximal4.210123.19125K562GTF2F1
chr195614718056147249+intron-Distal3.329443.46849HepG2TAF15
chr195614769756147765+intron-Distal4.209974.76104HepG2HNRNPU
chr195615273056152800+intron-Distal4.8217515.23846HepG2PRPF4
chr195615295556153025+intron-Distal3.363364.01575K562NONO
chr195615284556152902+intron-Distal3.348196.38416HepG2FAM120A
chr195615270856152780+intron-Distal5.116944.41467K562DDX52
chr195615055056150641+intron-Distal3.397863.57155HepG2ILF3
chr195615293856153016+intron-Distal4.3257817.90410HepG2CSTF2T
chr195615212756152184+intron-Distal4.228438.65415K562NONO
chr195615152956151574+intron-Distal3.638028.50973HepG2CSTF2T
chr195615319256153206+intron-Distal3.166083.69530HepG2CSTF2T
chr195615283056152907+intron-Distal3.7414814.43060HepG2CSTF2T
chr195615263056152730+intron-Distal,intron-Proximal5.3069021.02579HepG2PRPF4
chr195615274856152806+intron-Distal4.886926.97401HepG2GTF2F1
chr195615272556152803+intron-Distal4.607294.44779HepG2FASTKD2
chr195615327856153320+intron-Distal4.668234.06667K562GTF2F1
chr195614780856147869+intron-Distal3.556064.50290K562GTF2F1
chr195615264156152730+intron-Distal,intron-Proximal5.5888226.14878HepG2CSTF2T
chr195614770756147754+intron-Distal4.630056.54349K562CSTF2T
chr195615325856153311+intron-Distal4.584374.85237K562UPF1
chr195614718456147220+intron-Distal4.392503.83825K562TAF15
chr195615284456152922+intron-Distal3.6866811.76164K562CSTF2T
chr195615191356151985+intron-Distal3.698196.75245K562NONO
chr195614851956148563+intron-Distal3.359774.25667K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF580 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF580 is not available on ENCORE database.

  • 48 RBPs can affect the levels of ZNF580.  








The Knockdown/knockout RNA-Seq assay for ZNF580 is not available on ENCORE database.





48 RBPs can affect the gene expression of ZNF580 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF580ENSG00000213015.4584.58830348.201500.747406.788705.89920HepG2BOP1
ZNF580ENSG00000213015.4137.60920207.57390-0.593002.553701.81170HepG2CALR
ZNF580ENSG00000213015.4118.78210205.94900-0.794002.411301.80430HepG2CELF1
ZNF580ENSG00000213015.494.59750170.09670-0.846503.390202.70650HepG2DDX3X
ZNF580ENSG00000213015.4347.38770471.47330-0.440602.577201.32370HepG2DDX47
ZNF580ENSG00000213015.4243.46110140.465500.793403.997403.29390HepG2EIF2S1
ZNF580ENSG00000213015.4226.66930156.620400.533202.031401.43530HepG2FXR1
ZNF580ENSG00000213015.4358.36480145.289201.3024011.3879010.08150HepG2G3BP1
ZNF580ENSG00000213015.4216.84740362.35960-0.740704.284003.49900HepG2GPKOW
ZNF580ENSG00000213015.4231.28600136.631500.759304.073903.22060HepG2HNRNPF
ZNF580ENSG00000213015.4245.78800147.116600.740403.589502.79980HepG2HNRNPK
ZNF580ENSG00000213015.4178.92240124.033200.528502.216001.66790HepG2HNRNPU
ZNF580ENSG00000213015.4202.25500134.539700.588002.332801.66590HepG2IGF2BP1
ZNF580ENSG00000213015.4207.95610315.22950-0.600103.405402.51050HepG2MSI2
ZNF580ENSG00000213015.4132.11280209.55090-0.665501.935601.42420HepG2PUF60
ZNF580ENSG00000213015.4317.76100222.480300.514202.382801.82410HepG2PUM1
ZNF580ENSG00000213015.4170.04280233.43120-0.457102.260801.69090HepG2PUS1
ZNF580ENSG00000213015.4112.35710255.40180-1.184708.973008.16220HepG2RBM22
ZNF580ENSG00000213015.4153.58530380.84450-1.310208.770807.38890HepG2SNRNP70
ZNF580ENSG00000213015.485.62950175.16670-1.032505.065004.47520HepG2SRSF1
ZNF580ENSG00000213015.4246.36710368.30160-0.580102.749801.75250HepG2SRSF3
ZNF580ENSG00000213015.4102.84680206.94020-1.008703.658102.95680HepG2SRSF5
ZNF580ENSG00000213015.4215.40100134.247500.682003.316802.56410HepG2SRSF7
ZNF580ENSG00000213015.4198.45130142.512700.477601.801101.33850HepG2SRSF9
ZNF580ENSG00000213015.4159.42960250.42700-0.651504.030603.43670HepG2SSB
ZNF580ENSG00000213015.4218.55810333.20910-0.608403.140602.47390HepG2U2AF1
ZNF580ENSG00000213015.4559.98000298.754400.906302.355901.45430HepG2U2AF2
ZNF580ENSG00000213015.4136.5524070.800000.947503.847402.95370HepG2UCHL5
ZNF580ENSG00000213015.4214.32590338.55850-0.659605.559804.85420HepG2ZNF622
ZNF580ENSG00000213015.4583.16670476.483500.291401.822201.34230K562AGGF1
ZNF580ENSG00000213015.4540.03600374.752100.527003.228702.60400K562AQR
ZNF580ENSG00000213015.4482.95230217.449801.1511010.540208.06590K562CCAR1
ZNF580ENSG00000213015.4248.49760173.305600.519802.491001.50500K562DDX3X
ZNF580ENSG00000213015.4701.04200511.912700.453504.500903.69740K562DDX47
ZNF580ENSG00000213015.4391.73860221.173000.824604.077102.82900K562EIF3A
ZNF580ENSG00000213015.4254.04490188.287300.432001.935801.41210K562FXR1
ZNF580ENSG00000213015.447.03850111.57790-1.246104.585103.62410K562G3BP2
ZNF580ENSG00000213015.4479.56280302.014900.667006.237504.88460K562HNRNPU
ZNF580ENSG00000213015.4319.81480190.170500.749804.170803.02750K562PSIP1
ZNF580ENSG00000213015.4229.78700146.865700.645702.935302.25390K562PTBP1
ZNF580ENSG00000213015.4413.10800232.019200.832204.619402.09670K562RBFOX2
ZNF580ENSG00000213015.4596.09040479.088400.315101.919801.41030K562RBM15
ZNF580ENSG00000213015.4229.88800140.731400.707902.488801.69500K562RBM22
ZNF580ENSG00000213015.4255.27530173.543600.556702.560701.61060K562RCC2
ZNF580ENSG00000213015.4277.39660148.119600.905106.135104.42110K562NELFE
ZNF580ENSG00000213015.4267.92660176.966000.598302.318401.41180K562RPS3
ZNF580ENSG00000213015.4277.86810164.510800.756104.357302.98600K562SRFBP1
ZNF580ENSG00000213015.4295.38180170.811500.790104.598203.18020K562SRSF4
ZNF580ENSG00000213015.4255.12630145.692100.808202.493901.81990K562TARDBP
ZNF580ENSG00000213015.4237.05300140.547600.754104.221303.17990K562TIA1
ZNF580ENSG00000213015.4275.38610182.907600.590202.145101.33140K562TIAL1
ZNF580ENSG00000213015.4281.60490194.357800.534902.676001.74900K562TRIM56
ZNF580ENSG00000213015.4694.08720571.463200.280402.174201.53200K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF580 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ZNF580 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ZNF580 is not avaliable on ENCORE database.